Click here to switch to the map view.

The map label for this gene is yggA [C]

Identifier: 158425426

GI number: 158425426

Start: 4355725

End: 4356330

Strand: Reverse

Name: yggA [C]

Synonym: AZC_3802

Alternate gene names: 158425426

Gene position: 4356330-4355725 (Counterclockwise)

Preceding gene: 158425428

Following gene: 158425424

Centisome position: 81.13

GC content: 58.75

Gene sequence:

>606_bases
ATGACCATCCCTCTCTTTTCAGGCTTCCTGCTGGGCCTGAGCTTGATCCTCGTCATTGGAGCACAGAACGCCTTCGTGCT
GCGCCTGGGTCTGAGGGGCGAGCATGTCCTGCCGGTGGTCTTAATCTGCGCTGTGTCCGATGCCGCGCTGATCCTGGTCG
GTGTCCTCGGATTTGCCCAGGTCAGCGCCATAATGCCCTGGGCCGAGCCGGTCATGCGATATGCAGGCGCGGCCTTTCTC
GTCCTGTACGGTGCCCGCAGCTTTAGATCAGCGTTCACGGCTGAGACCGGCCTTCAGGTGACGGGGACGACCACAATCAC
TCTTCAAGGCGCTTTGCTGACCTGCTTGGCGCTCACCTGGCTCAATCCTCACGTCTACCTCGATACGGTGGTACTGATTG
GGTCCATCTCGACCCAATTCAATGAGGGGCGGGGGCTGTTCGCACTCGGAGCCATGCTCTCATCATTCACCTTCTTCTTT
TCACTTGGATACGGCGCACGCCTGCTGCGTCCGTTCTTTGCTCGTCCGGGAACGTGGCGGGTTCTCGATGGAGGGATTGG
GCTCGTGATGTGGATTACAGCAGCAAGACTATTACTCCCACAATGA

Upstream 100 bases:

>100_bases
TCGAGCATAGATTAGAAACTCTAATGCGGGCTGAGAAGGTTTAAGTGCCCTAATCATGAGCCCTGGCGTACCTCATGTCG
ATCCTTAGTCGGAGTTCGAC

Downstream 100 bases:

>100_bases
AGCCACCAATGGCTGACGACAGCGTTGTGACGGACCGTACCATTAGCCTTACTACTAAAGCCTTGGCGATCCTCTAGGTG
TGACTTCTGATCAGGTTGTT

Product: L-lysine exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTIPLFSGFLLGLSLILVIGAQNAFVLRLGLRGEHVLPVVLICAVSDAALILVGVLGFAQVSAIMPWAEPVMRYAGAAFL
VLYGARSFRSAFTAETGLQVTGTTTITLQGALLTCLALTWLNPHVYLDTVVLIGSISTQFNEGRGLFALGAMLSSFTFFF
SLGYGARLLRPFFARPGTWRVLDGGIGLVMWITAARLLLPQ

Sequences:

>Translated_201_residues
MTIPLFSGFLLGLSLILVIGAQNAFVLRLGLRGEHVLPVVLICAVSDAALILVGVLGFAQVSAIMPWAEPVMRYAGAAFL
VLYGARSFRSAFTAETGLQVTGTTTITLQGALLTCLALTWLNPHVYLDTVVLIGSISTQFNEGRGLFALGAMLSSFTFFF
SLGYGARLLRPFFARPGTWRVLDGGIGLVMWITAARLLLPQ
>Mature_200_residues
TIPLFSGFLLGLSLILVIGAQNAFVLRLGLRGEHVLPVVLICAVSDAALILVGVLGFAQVSAIMPWAEPVMRYAGAAFLV
LYGARSFRSAFTAETGLQVTGTTTITLQGALLTCLALTWLNPHVYLDTVVLIGSISTQFNEGRGLFALGAMLSSFTFFFS
LGYGARLLRPFFARPGTWRVLDGGIGLVMWITAARLLLPQ

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=193, Percent_Identity=37.3056994818653, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21525; Mature: 21394

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPLFSGFLLGLSLILVIGAQNAFVLRLGLRGEHVLPVVLICAVSDAALILVGVLGFAQ
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
VSAIMPWAEPVMRYAGAAFLVLYGARSFRSAFTAETGLQVTGTTTITLQGALLTCLALTW
HHHHCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCEEECEEEEEEHHHHHHHHHHHH
LNPHVYLDTVVLIGSISTQFNEGRGLFALGAMLSSFTFFFSLGYGARLLRPFFARPGTWR
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE
VLDGGIGLVMWITAARLLLPQ
EEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIPLFSGFLLGLSLILVIGAQNAFVLRLGLRGEHVLPVVLICAVSDAALILVGVLGFAQ
CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
VSAIMPWAEPVMRYAGAAFLVLYGARSFRSAFTAETGLQVTGTTTITLQGALLTCLALTW
HHHHCCHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCEEECEEEEEEHHHHHHHHHHHH
LNPHVYLDTVVLIGSISTQFNEGRGLFALGAMLSSFTFFFSLGYGARLLRPFFARPGTWR
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE
VLDGGIGLVMWITAARLLLPQ
EEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]