Click here to switch to the map view.

The map label for this gene is appB [H]

Identifier: 158425384

GI number: 158425384

Start: 4314189

End: 4315196

Strand: Direct

Name: appB [H]

Synonym: AZC_3760

Alternate gene names: 158425384

Gene position: 4314189-4315196 (Clockwise)

Preceding gene: 158425383

Following gene: 158425385

Centisome position: 80.34

GC content: 65.48

Gene sequence:

>1008_bases
ATGGGCATCGATCTCCCCCTCATCTGGGCCGTCATCATCGGCTTCGGCCTCATGATGTATGTCATCATGGACGGCTTCGA
CCTCGGCATCGGCATCCTCTTCCCCTTCATCCGCGACCGAGATGACCGGGATGTGATGGTGAACACCGTCGCCCCCGTGT
GGGACGGCAACGAAACCTGGCTGGTGCTCGGCGGCGCCGGGTTGCTGGCGGCCTTTCCGCTCGCCTATTCCGTGCTGCTG
AGCGCGCTCTATCTGCCGCTCATCTTCATGCTGGCGGGCCTCATCTGGCGCGGAGTGGCCTTCGAGTTCCGATTCAAGGC
GGATGAAGGCCACCGTCCCTTCTGGGATCACGCCTTCGCCTGGGGCTCCATCGTCGCCACCTTCTGCCAGGGGCTGGCGC
TTGGCGCCTTCATCAACGGCTTCCGGGTCGAGAACGGCGCCTATGCGGGCGGTGTGCTCGATTTCCTCTCGCCCTTCAGC
GTCTTCACCGGCCTCGGCCTCGTGGTGGCCTATGCGCTGCTCGGCTGCACCTGGCTGATTCTGAAGACCGAAGGGCCGCT
TCAGACCCGCATGATCGCGCTGGCCCGGCCCATCACCTTCGCCCTGCTGGCCGTCATCGCCGGCGTCAGCCTCTGGACCC
CGCTGGCCCATGAAGGCGTCGCCGCCCGCTGGTTCAGCCTGCCCAACCTCCTGTTCTTCCTGCCGGTGCCGCTTCTGGTG
CTGGCGGCGGCCTATGGGATGATCAAGGCATTGGCCCGCGGGTCCCACGGCTTGCCCTTCCTGCTGGCGCTGGCCTTACT
GTTCCTCGGCTACAGTGGCCTTGCCATCAGCCTGTTCCCCAATATCATCCCGCCCGCCGTCTCCATCTGGGGTGCGGCGG
CGCCGGTGCAGAGCCTCGGCTTCGCGCTGGTGGGCGCGCTGTTCATCATCCCCTTCATTCTGGGCTACACCGCCTGGTCC
TATTATGTGTTCCGGGGCAAGGTGCGCGCAGGGGATGGCTACCATTGA

Upstream 100 bases:

>100_bases
TCCCGCGGCCGATACCGGGCGCAACCAGCGCCCGTCCCGCCCGCTCTCGGCCGCGCCCGGGGCTGTCCTCTCGATCGGCC
ATGGAGAGTGAGCCATGAGC

Downstream 100 bases:

>100_bases
GCAAGGATACAGCACCCTCGAACAGGACTGAGGGGAGATCCCGCGGCAACGTGTGGGTGCGCAGGCTGGGCTGGCTCATC
CTCATCTGGTCCCTCAGCGT

Product: cytochrome bd-type quinol oxidase subunit 2

Products: NA

Alternate protein names: Cytochrome bd-II oxidase subunit II [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MGIDLPLIWAVIIGFGLMMYVIMDGFDLGIGILFPFIRDRDDRDVMVNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVLL
SALYLPLIFMLAGLIWRGVAFEFRFKADEGHRPFWDHAFAWGSIVATFCQGLALGAFINGFRVENGAYAGGVLDFLSPFS
VFTGLGLVVAYALLGCTWLILKTEGPLQTRMIALARPITFALLAVIAGVSLWTPLAHEGVAARWFSLPNLLFFLPVPLLV
LAAAYGMIKALARGSHGLPFLLALALLFLGYSGLAISLFPNIIPPAVSIWGAAAPVQSLGFALVGALFIIPFILGYTAWS
YYVFRGKVRAGDGYH

Sequences:

>Translated_335_residues
MGIDLPLIWAVIIGFGLMMYVIMDGFDLGIGILFPFIRDRDDRDVMVNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVLL
SALYLPLIFMLAGLIWRGVAFEFRFKADEGHRPFWDHAFAWGSIVATFCQGLALGAFINGFRVENGAYAGGVLDFLSPFS
VFTGLGLVVAYALLGCTWLILKTEGPLQTRMIALARPITFALLAVIAGVSLWTPLAHEGVAARWFSLPNLLFFLPVPLLV
LAAAYGMIKALARGSHGLPFLLALALLFLGYSGLAISLFPNIIPPAVSIWGAAAPVQSLGFALVGALFIIPFILGYTAWS
YYVFRGKVRAGDGYH
>Mature_334_residues
GIDLPLIWAVIIGFGLMMYVIMDGFDLGIGILFPFIRDRDDRDVMVNTVAPVWDGNETWLVLGGAGLLAAFPLAYSVLLS
ALYLPLIFMLAGLIWRGVAFEFRFKADEGHRPFWDHAFAWGSIVATFCQGLALGAFINGFRVENGAYAGGVLDFLSPFSV
FTGLGLVVAYALLGCTWLILKTEGPLQTRMIALARPITFALLAVIAGVSLWTPLAHEGVAARWFSLPNLLFFLPVPLLVL
AAAYGMIKALARGSHGLPFLLALALLFLGYSGLAISLFPNIIPPAVSIWGAAAPVQSLGFALVGALFIIPFILGYTAWSY
YVFRGKVRAGDGYH

Specific function: Cytochrome oxidase subunit [H]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli CydB [H]

Homologues:

Organism=Escherichia coli, GI1787213, Length=363, Percent_Identity=32.7823691460055, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1786954, Length=367, Percent_Identity=29.4277929155313, Blast_Score=139, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 36209; Mature: 36078

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIDLPLIWAVIIGFGLMMYVIMDGFDLGIGILFPFIRDRDDRDVMVNTVAPVWDGNETW
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCEECCCCEE
LVLGGAGLLAAFPLAYSVLLSALYLPLIFMLAGLIWRGVAFEFRFKADEGHRPFWDHAFA
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH
WGSIVATFCQGLALGAFINGFRVENGAYAGGVLDFLSPFSVFTGLGLVVAYALLGCTWLI
HHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
LKTEGPLQTRMIALARPITFALLAVIAGVSLWTPLAHEGVAARWFSLPNLLFFLPVPLLV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LAAAYGMIKALARGSHGLPFLLALALLFLGYSGLAISLFPNIIPPAVSIWGAAAPVQSLG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHCCHHHHHHHH
FALVGALFIIPFILGYTAWSYYVFRGKVRAGDGYH
HHHHHHHHHHHHHHHHHHHHHHHEECEEECCCCCC
>Mature Secondary Structure 
GIDLPLIWAVIIGFGLMMYVIMDGFDLGIGILFPFIRDRDDRDVMVNTVAPVWDGNETW
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCEECCCCEE
LVLGGAGLLAAFPLAYSVLLSALYLPLIFMLAGLIWRGVAFEFRFKADEGHRPFWDHAFA
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH
WGSIVATFCQGLALGAFINGFRVENGAYAGGVLDFLSPFSVFTGLGLVVAYALLGCTWLI
HHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
LKTEGPLQTRMIALARPITFALLAVIAGVSLWTPLAHEGVAARWFSLPNLLFFLPVPLLV
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LAAAYGMIKALARGSHGLPFLLALALLFLGYSGLAISLFPNIIPPAVSIWGAAAPVQSLG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHCCHHHHHHHH
FALVGALFIIPFILGYTAWSYYVFRGKVRAGDGYH
HHHHHHHHHHHHHHHHHHHHHHHEECEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658595; 8905232; 9278503; 8626304 [H]