| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425373
Identifier: 158425373
GI number: 158425373
Start: 4301218
End: 4302198
Strand: Reverse
Name: 158425373
Synonym: AZC_3749
Alternate gene names: NA
Gene position: 4302198-4301218 (Counterclockwise)
Preceding gene: 158425374
Following gene: 158425371
Centisome position: 80.12
GC content: 67.79
Gene sequence:
>981_bases ATGCGCATTCTCGTCATCGGCGGTGCCGGCATGGTTGGCCGCAAGCTGATCGAACGCCTGGCGCGGGAGGGCCGCCTCGG CGGCAAGCCCATCAGCCATCTCACCGCCCATGATGTGGTGGCGCCCGCCCGCGTGGAGGCGCCCTTCACCATCGAGACGC GGGTGTCGGACCTGTCCGTTCCGGGCGAGGCCGAGGCGCTGATCAAGGATCGGCCGGACGTCATCTTCCATCTCGCCGCC ATCGTGTCGGGCGAGGCGGAGGCCGATTTCGACAAGGGCTACCGCATCAATCTCGATGGCACGCGTTTCCTGTTCGACGC CATCCGGGTGGTGGAGAGCTATGTGCCGCGCGTGGTGTTCACCTCGACGCTCGCGGTGTTCGGCGCGCCTTATCCGGCCG AGCCCATCGATGATGAATTCTTCCAGACGCCGCTCACCTCCTACGGCACGCAGAAGGCCATTTGCGAATTGTTGATGGCG GATTATTCCCGTCGCGGCTTCCTGGATGGCGTGGGCATCCGCCTGCCCACCATCTGCGTGCGGCCGGGCAAGCCCAACAA GGCGGCGTCGGGCTTTTTCTCCGGCATCATCCGCGAGCCGCTGGCCGGGCAGGAGGCGATCCTGCCGGTCTCCGAGGACG TGGTGCACTGGCACGCTTCGCCGCGCTCCGCCGCCGGCTTCCTCGTCCATGCGGCGACGCTGGACACGGCGCAGCTCGGC GCCCGGCGCTCCTTGAACATGCCGGGCGTCGGCGCGAGCGTGGGCGATCAGATCGAGGCGCTGCGCAAGGTCGCGGGCGA CAAGGCGGTGGCGCGCATCCGCCGCGAGCCCGATCCGGTGGTGGCGAAGATCGTGAGCGGCTGGCCGCGCACCTTCAATC CCGCCCGTGCGCTCGCGCTGGGTTTCAAGGCGGAGACCTCCTTCGAGGAGATCATCCGCATTCATATCGAGGATGAGCTG GGCGGCAAGATCGCCGACTGA
Upstream 100 bases:
>100_bases GGCATCTGCCACGCCTCCCCCCGCCGCAGATACCCCAAGCGCGCCCGCTGAGAGGCGCGGCAAGATCCGGTCCGGAAACA GATTTCAAGGAGAGATGTTC
Downstream 100 bases:
>100_bases GCCCCGCAACTGCCGGACTTGAGGGGCATCGGCTGAAGCGGCCGGTGCCCTTTTTATGTCAGGCGGCGAAGGCGGGCTCG GCGCGGCTTGCGGCGAGGCC
Product: UDP-glucose 4-epimerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MRILVIGGAGMVGRKLIERLAREGRLGGKPISHLTAHDVVAPARVEAPFTIETRVSDLSVPGEAEALIKDRPDVIFHLAA IVSGEAEADFDKGYRINLDGTRFLFDAIRVVESYVPRVVFTSTLAVFGAPYPAEPIDDEFFQTPLTSYGTQKAICELLMA DYSRRGFLDGVGIRLPTICVRPGKPNKAASGFFSGIIREPLAGQEAILPVSEDVVHWHASPRSAAGFLVHAATLDTAQLG ARRSLNMPGVGASVGDQIEALRKVAGDKAVARIRREPDPVVAKIVSGWPRTFNPARALALGFKAETSFEEIIRIHIEDEL GGKIAD
Sequences:
>Translated_326_residues MRILVIGGAGMVGRKLIERLAREGRLGGKPISHLTAHDVVAPARVEAPFTIETRVSDLSVPGEAEALIKDRPDVIFHLAA IVSGEAEADFDKGYRINLDGTRFLFDAIRVVESYVPRVVFTSTLAVFGAPYPAEPIDDEFFQTPLTSYGTQKAICELLMA DYSRRGFLDGVGIRLPTICVRPGKPNKAASGFFSGIIREPLAGQEAILPVSEDVVHWHASPRSAAGFLVHAATLDTAQLG ARRSLNMPGVGASVGDQIEALRKVAGDKAVARIRREPDPVVAKIVSGWPRTFNPARALALGFKAETSFEEIIRIHIEDEL GGKIAD >Mature_326_residues MRILVIGGAGMVGRKLIERLAREGRLGGKPISHLTAHDVVAPARVEAPFTIETRVSDLSVPGEAEALIKDRPDVIFHLAA IVSGEAEADFDKGYRINLDGTRFLFDAIRVVESYVPRVVFTSTLAVFGAPYPAEPIDDEFFQTPLTSYGTQKAICELLMA DYSRRGFLDGVGIRLPTICVRPGKPNKAASGFFSGIIREPLAGQEAILPVSEDVVHWHASPRSAAGFLVHAATLDTAQLG ARRSLNMPGVGASVGDQIEALRKVAGDKAVARIRREPDPVVAKIVSGWPRTFNPARALALGFKAETSFEEIIRIHIEDEL GGKIAD
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 35169; Mature: 35169
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVIGGAGMVGRKLIERLAREGRLGGKPISHLTAHDVVAPARVEAPFTIETRVSDLSV CEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCC PGEAEALIKDRPDVIFHLAAIVSGEAEADFDKGYRINLDGTRFLFDAIRVVESYVPRVVF CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCHHHH TSTLAVFGAPYPAEPIDDEFFQTPLTSYGTQKAICELLMADYSRRGFLDGVGIRLPTICV HHHHHHHCCCCCCCCCCHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE RPGKPNKAASGFFSGIIREPLAGQEAILPVSEDVVHWHASPRSAAGFLVHAATLDTAQLG CCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHEEECCCCCCCCCEEEEEEHHCHHHHC ARRSLNMPGVGASVGDQIEALRKVAGDKAVARIRREPDPVVAKIVSGWPRTFNPARALAL CCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHC GFKAETSFEEIIRIHIEDELGGKIAD CCCCCCCHHHHEEEEECCCCCCCCCC >Mature Secondary Structure MRILVIGGAGMVGRKLIERLAREGRLGGKPISHLTAHDVVAPARVEAPFTIETRVSDLSV CEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCC PGEAEALIKDRPDVIFHLAAIVSGEAEADFDKGYRINLDGTRFLFDAIRVVESYVPRVVF CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCHHHH TSTLAVFGAPYPAEPIDDEFFQTPLTSYGTQKAICELLMADYSRRGFLDGVGIRLPTICV HHHHHHHCCCCCCCCCCHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE RPGKPNKAASGFFSGIIREPLAGQEAILPVSEDVVHWHASPRSAAGFLVHAATLDTAQLG CCCCCCHHHHHHHHHHHHCCCCCCCEECCCCHHHEEECCCCCCCCCEEEEEEHHCHHHHC ARRSLNMPGVGASVGDQIEALRKVAGDKAVARIRREPDPVVAKIVSGWPRTFNPARALAL CCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHC GFKAETSFEEIIRIHIEDELGGKIAD CCCCCCCHHHHEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]