| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ppk
Identifier: 158425290
GI number: 158425290
Start: 4214496
End: 4216685
Strand: Reverse
Name: ppk
Synonym: AZC_3666
Alternate gene names: 158425290
Gene position: 4216685-4214496 (Counterclockwise)
Preceding gene: 158425292
Following gene: 158425289
Centisome position: 78.53
GC content: 65.21
Gene sequence:
>2190_bases ATGACTGCGACTGAGGCGACGGCTCTTGCGATGACGCCCGAGGCGGACGGGCCCGCCAGCGATCTCGCGACCTCTCCGCA GCGTTTCATCAACCGCGAAATCTCCTGGCTGCACTTCAATCGCCGCGTGCTGGAGGAAGCCTCCAACCGGAACCATCCGC TGTTGGAGCAACTGCGCTTCCTGTCCATTTCGGCGAACAATCTCGACGAATTCTTCATGGTGCGCGTGGCCGGCCTCAAG GAGCAGATCCGCGAGGGCCTCACCATCGCCAGCCCCGATGGCCTCCTGCCGGCCGAACAGCTCACCAATGTGGTGGCCGA GGCCGGCTCGCTGATCTTCGACCAGCAGCAGCGCTGGCTTGAGCTGCGCAAGGAACTGGCGGGAGCCGGCATCGTGCTGG TGGACGGCGCGGATGTGAGCGCCGGTGATCTGGAGGTGCTGGAGAAGCACTTCCTGCACCATGTCTTCCCGGTGCTGACC CCGCTCGCGATCGATCCGGCGCACCCCTTCCCCTTTATCCCCAACCTCGGCTTCTCGCTGGCGCTGCAACTGGTGCGGCA GACCGACGGCCGGGGCATGAATGCCCTCATCCGCATCCCCGCCAAGGTGGAGCGCTTTATCCGCCTGCCCGAGCGCGAGC CGGGCACCATGCGCTTCATCACGCTGGAGCAGATGACCGGCCTGTTCATCGGCCGCCTGTTCCCAGGCTATGCGGTGAAG GGGCAGGGCGTGTTCCGCGTGGTGCGCGACAGCGACCTTGAAATCGAGGAAGAGGCGGAGGATCTGGTCCGCCTGTTCGA GACGGCGCTGAAGCAGCGGCGCTACGGCGAGGTGATCCGCATGGAAGCGGACGCCGGCATGCCGGAGGAACTGCGGGTGT TCGTCGCCCGCGAACTCGACGTGCAGGACGACGAGATATTCGTCGTGGACGGCGTGCTGGCGCTGAACGAATTCTCCCAG CTTGTCTCCGTGGACCGGCCGGACCTGAAATTCCAGGCCTTCAATGCGCGATTTCCCGAGCGCATCCGCGACCATGGCGG CGACTGCTTTCTGGCCATTCGCGAGAAGGACATTCTGGTTCACCACCCTTATGAATCCTTCGATGTGGTGGTTCAGTTTC TCCGCCAGGCTGCTCGCGACCCTAATGTCGTCGCCATCAAGCAGACCCTCTACCGCACCTCCTCCGACAGCCCGATCGTG AAGGCGCTGGCCGAAGCGGCGGAGGCCGGCAAGTCGGTGACCGCGCTGGTGGAGCTGAAGGCCCGCTTTGACGAGGAAGC CAACATCCGCTGGGCGCGCGATCTGGAGCGCGCGGGCGTGCAGGTGGTGTTCGGCTTCATCGACCTGAAGACCCACGGCA AGCTGTCCATGGTGGTGCGCCGCGAGGGCGGCGCGCTCGCCACCTACTGCCATGTGGGGACGGGCAACTATCACCCCATC ACCGCCCGCATCTACACGGACCTCTCCTTCTTCACCGCCGACCCGGTGATCGCGCAGGACGTGGCCCGCATCTTCAACTT CATCACCGGCTATGCCCAGCCGGGTGAACTCGACGCCATGGCGGTGTCGCCGGCAACGCTCAAGCCGCGCATCATGCGCC ACATCGCCGACGAGATCGCGCACGCCCGCGCCGGCCGCCCGGCCGCCATCTGGCTGAAGTGCAACTCGCTGGTGGACCCG GTGGTGATCGACGCCCTCTATGCGGCGAGCAGCGCCGGCGTGCAGGTGGACTGCGTTGTGCGCGGCATCTGCTGCCTGCG CCCCGGCATCCCCGGCCTGTCGGAGAACATCCGGGTGAAGTCCATCGTCGGCCGCTTCCTCGAGCACAGCCGCGTCTACT GCTTCGGCGCCGGCCATGGCCTGCCGCACCCGAAGGCCATCGTCTACATCTCCTCGGCCGATCTGATGACCCGCAACCTC GACCGCCGGGTTGAGACACTCTGCCCCATCACCAATCCCACGGTGCATGAGCAGGTGCTGGATCAGATCATGGTCGCCAA TCTTATCGACAACGAACAGAGCTGGCGGGTGTTGCCCGACGGCTCTTCGGAACGCATAGTCCCGGCGCCGGGCGAAGAGC CGTTCAACGCCCATCGCTATTTCATGACCAACCCGAGCTTGTCAGGACGTGGAAAGTCTCTCAAGGATTCTTCGCCGCGC AGTCTCCTCGTCCGCCGTTCGGGAGGATGA
Upstream 100 bases:
>100_bases GGAGGGCGGCGGCCACCGTTCCCCCGGTGCGGCATCCCGTCATAGAGTGGTCATGCAAGGCGGCCATGGTCCGCCGCGTG CAAAACAGGGGAAGTGTTCC
Downstream 100 bases:
>100_bases CCACAGGGGCCTTTCCACCCTGATGGCCGGCGAGGCCCCGGTCGCGGTCATCGACATCGGATCCAATTCCGTCCGCCTCG TGGTCTATGAGGCGGTGACC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MTATEATALAMTPEADGPASDLATSPQRFINREISWLHFNRRVLEEASNRNHPLLEQLRFLSISANNLDEFFMVRVAGLK EQIREGLTIASPDGLLPAEQLTNVVAEAGSLIFDQQQRWLELRKELAGAGIVLVDGADVSAGDLEVLEKHFLHHVFPVLT PLAIDPAHPFPFIPNLGFSLALQLVRQTDGRGMNALIRIPAKVERFIRLPEREPGTMRFITLEQMTGLFIGRLFPGYAVK GQGVFRVVRDSDLEIEEEAEDLVRLFETALKQRRYGEVIRMEADAGMPEELRVFVARELDVQDDEIFVVDGVLALNEFSQ LVSVDRPDLKFQAFNARFPERIRDHGGDCFLAIREKDILVHHPYESFDVVVQFLRQAARDPNVVAIKQTLYRTSSDSPIV KALAEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIDLKTHGKLSMVVRREGGALATYCHVGTGNYHPI TARIYTDLSFFTADPVIAQDVARIFNFITGYAQPGELDAMAVSPATLKPRIMRHIADEIAHARAGRPAAIWLKCNSLVDP VVIDALYAASSAGVQVDCVVRGICCLRPGIPGLSENIRVKSIVGRFLEHSRVYCFGAGHGLPHPKAIVYISSADLMTRNL DRRVETLCPITNPTVHEQVLDQIMVANLIDNEQSWRVLPDGSSERIVPAPGEEPFNAHRYFMTNPSLSGRGKSLKDSSPR SLLVRRSGG
Sequences:
>Translated_729_residues MTATEATALAMTPEADGPASDLATSPQRFINREISWLHFNRRVLEEASNRNHPLLEQLRFLSISANNLDEFFMVRVAGLK EQIREGLTIASPDGLLPAEQLTNVVAEAGSLIFDQQQRWLELRKELAGAGIVLVDGADVSAGDLEVLEKHFLHHVFPVLT PLAIDPAHPFPFIPNLGFSLALQLVRQTDGRGMNALIRIPAKVERFIRLPEREPGTMRFITLEQMTGLFIGRLFPGYAVK GQGVFRVVRDSDLEIEEEAEDLVRLFETALKQRRYGEVIRMEADAGMPEELRVFVARELDVQDDEIFVVDGVLALNEFSQ LVSVDRPDLKFQAFNARFPERIRDHGGDCFLAIREKDILVHHPYESFDVVVQFLRQAARDPNVVAIKQTLYRTSSDSPIV KALAEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIDLKTHGKLSMVVRREGGALATYCHVGTGNYHPI TARIYTDLSFFTADPVIAQDVARIFNFITGYAQPGELDAMAVSPATLKPRIMRHIADEIAHARAGRPAAIWLKCNSLVDP VVIDALYAASSAGVQVDCVVRGICCLRPGIPGLSENIRVKSIVGRFLEHSRVYCFGAGHGLPHPKAIVYISSADLMTRNL DRRVETLCPITNPTVHEQVLDQIMVANLIDNEQSWRVLPDGSSERIVPAPGEEPFNAHRYFMTNPSLSGRGKSLKDSSPR SLLVRRSGG >Mature_728_residues TATEATALAMTPEADGPASDLATSPQRFINREISWLHFNRRVLEEASNRNHPLLEQLRFLSISANNLDEFFMVRVAGLKE QIREGLTIASPDGLLPAEQLTNVVAEAGSLIFDQQQRWLELRKELAGAGIVLVDGADVSAGDLEVLEKHFLHHVFPVLTP LAIDPAHPFPFIPNLGFSLALQLVRQTDGRGMNALIRIPAKVERFIRLPEREPGTMRFITLEQMTGLFIGRLFPGYAVKG QGVFRVVRDSDLEIEEEAEDLVRLFETALKQRRYGEVIRMEADAGMPEELRVFVARELDVQDDEIFVVDGVLALNEFSQL VSVDRPDLKFQAFNARFPERIRDHGGDCFLAIREKDILVHHPYESFDVVVQFLRQAARDPNVVAIKQTLYRTSSDSPIVK ALAEAAEAGKSVTALVELKARFDEEANIRWARDLERAGVQVVFGFIDLKTHGKLSMVVRREGGALATYCHVGTGNYHPIT ARIYTDLSFFTADPVIAQDVARIFNFITGYAQPGELDAMAVSPATLKPRIMRHIADEIAHARAGRPAAIWLKCNSLVDPV VIDALYAASSAGVQVDCVVRGICCLRPGIPGLSENIRVKSIVGRFLEHSRVYCFGAGHGLPHPKAIVYISSADLMTRNLD RRVETLCPITNPTVHEQVLDQIMVANLIDNEQSWRVLPDGSSERIVPAPGEEPFNAHRYFMTNPSLSGRGKSLKDSSPRS LLVRRSGG
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family
Homologues:
Organism=Escherichia coli, GI1788847, Length=688, Percent_Identity=37.3546511627907, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPK_AZOC5 (A8IMV5)
Other databases:
- EMBL: AP009384 - RefSeq: YP_001526582.1 - ProteinModelPortal: A8IMV5 - SMR: A8IMV5 - GeneID: 5688127 - GenomeReviews: AP009384_GR - KEGG: azc:AZC_3666 - HOGENOM: HBG341268 - OMA: NYHAGNA - ProtClustDB: PRK05443 - BioCyc: ACAU438753:AZC_3666-MONOMER - HAMAP: MF_00347 - InterPro: IPR003414 - PIRSF: PIRSF015589 - TIGRFAMs: TIGR03705
Pfam domain/function: PF02503 PP_kinase
EC number: =2.7.4.1
Molecular weight: Translated: 80967; Mature: 80836
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: ACT_SITE 452-452 ACT_SITE 471-471
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATEATALAMTPEADGPASDLATSPQRFINREISWLHFNRRVLEEASNRNHPLLEQLRF CCCCCCEEEEECCCCCCCHHHHCCCHHHHHCCCHHHEEHHHHHHHHHCCCCCCHHHHHHH LSISANNLDEFFMVRVAGLKEQIREGLTIASPDGLLPAEQLTNVVAEAGSLIFDQQQRWL HEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ELRKELAGAGIVLVDGADVSAGDLEVLEKHFLHHVFPVLTPLAIDPAHPFPFIPNLGFSL HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH ALQLVRQTDGRGMNALIRIPAKVERFIRLPEREPGTMRFITLEQMTGLFIGRLFPGYAVK HHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEC GQGVFRVVRDSDLEIEEEAEDLVRLFETALKQRRYGEVIRMEADAGMPEELRVFVARELD CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCC VQDDEIFVVDGVLALNEFSQLVSVDRPDLKFQAFNARFPERIRDHGGDCFLAIREKDILV CCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCCEEEEEECCCEEE HHPYESFDVVVQFLRQAARDPNVVAIKQTLYRTSSDSPIVKALAEAAEAGKSVTALVELK ECCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHH ARFDEEANIRWARDLERAGVQVVFGFIDLKTHGKLSMVVRREGGALATYCHVGTGNYHPI HHCCCCCCCHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEECCCEEEEEEEECCCCCCEE TARIYTDLSFFTADPVIAQDVARIFNFITGYAQPGELDAMAVSPATLKPRIMRHIADEIA EEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH HARAGRPAAIWLKCNSLVDPVVIDALYAASSAGVQVDCVVRGICCLRPGIPGLSENIRVK HHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHH SIVGRFLEHSRVYCFGAGHGLPHPKAIVYISSADLMTRNLDRRVETLCPITNPTVHEQVL HHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHH DQIMVANLIDNEQSWRVLPDGSSERIVPAPGEEPFNAHRYFMTNPSLSGRGKSLKDSSPR HHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC SLLVRRSGG EEEEEECCC >Mature Secondary Structure TATEATALAMTPEADGPASDLATSPQRFINREISWLHFNRRVLEEASNRNHPLLEQLRF CCCCCEEEEECCCCCCCHHHHCCCHHHHHCCCHHHEEHHHHHHHHHCCCCCCHHHHHHH LSISANNLDEFFMVRVAGLKEQIREGLTIASPDGLLPAEQLTNVVAEAGSLIFDQQQRWL HEECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ELRKELAGAGIVLVDGADVSAGDLEVLEKHFLHHVFPVLTPLAIDPAHPFPFIPNLGFSL HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH ALQLVRQTDGRGMNALIRIPAKVERFIRLPEREPGTMRFITLEQMTGLFIGRLFPGYAVK HHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEC GQGVFRVVRDSDLEIEEEAEDLVRLFETALKQRRYGEVIRMEADAGMPEELRVFVARELD CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCC VQDDEIFVVDGVLALNEFSQLVSVDRPDLKFQAFNARFPERIRDHGGDCFLAIREKDILV CCCCCEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHCCCCEEEEEECCCEEE HHPYESFDVVVQFLRQAARDPNVVAIKQTLYRTSSDSPIVKALAEAAEAGKSVTALVELK ECCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHH ARFDEEANIRWARDLERAGVQVVFGFIDLKTHGKLSMVVRREGGALATYCHVGTGNYHPI HHCCCCCCCHHHHHHHHCCEEEEEEEEEEECCCCEEEEEEECCCEEEEEEEECCCCCCEE TARIYTDLSFFTADPVIAQDVARIFNFITGYAQPGELDAMAVSPATLKPRIMRHIADEIA EEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH HARAGRPAAIWLKCNSLVDPVVIDALYAASSAGVQVDCVVRGICCLRPGIPGLSENIRVK HHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHH SIVGRFLEHSRVYCFGAGHGLPHPKAIVYISSADLMTRNLDRRVETLCPITNPTVHEQVL HHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHH DQIMVANLIDNEQSWRVLPDGSSERIVPAPGEEPFNAHRYFMTNPSLSGRGKSLKDSSPR HHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC SLLVRRSGG EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA