| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425225
Identifier: 158425225
GI number: 158425225
Start: 4131729
End: 4132214
Strand: Reverse
Name: 158425225
Synonym: AZC_3601
Alternate gene names: NA
Gene position: 4132214-4131729 (Counterclockwise)
Preceding gene: 158425226
Following gene: 158425224
Centisome position: 76.95
GC content: 65.23
Gene sequence:
>486_bases ATGCGCAAGATCACACACATCGTCATCCACTGTGCGGCCACCCCGGAAGGCCGCGAGGTCTCCGTTAAGGAGATCGACCG TTGGCACCGGGAGCGTGGCTTCGCCAAGATCGGCTATCACTACGTTATCCATCTCGACGGCTCGATTGATCCCGGCCGCT CCGAGGAGGAGATCGGCGCCCACGTTCAGGGCCACAACGCCACGTCCATCGGCATCTGCTACATCGGGGGCACGGAAGCC CACGACGTGAAGAAGCCGAAGGACACCCGCACCCCCGCTCAGAAGGCGGCAATGGAGCGGCTGGTGAAGGAGCTTCTGAC CCGCTACCCCGGCGCTGAAGTGCTCGGCCACAACGACTTTCCCGGCGTGAACAAGGCGTGCCCTGCCTTCGACACCCGCA AGTGGTGGGCCGAAGTCAGCAAGCGGGACGCCGCTCCCGCGCCGCAGCCGGCCTTCTGCAAGACCTGCGGCCAGAAGCTG CCCTGA
Upstream 100 bases:
>100_bases GACCACTTACGCCATGTGGTGTGAGAAGAACGGCTTCAAATACGCTGACCGCAGCATCCCCGCAGAGTGGCTGAAAGAGC CCGCGCGGAACTGACAGACA
Downstream 100 bases:
>100_bases TCCAACCCCCTCCCACAAACACCCTGAAGCCCTCGGCCCCGCGCCGGGGGCTTTTTCGCATCCAGCTTTTGAGCATCCCA CGGAAAGGAGCGATATGAGC
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGAHVQGHNATSIGICYIGGTEA HDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDFPGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKL P
Sequences:
>Translated_161_residues MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGAHVQGHNATSIGICYIGGTEA HDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDFPGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKL P >Mature_161_residues MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGAHVQGHNATSIGICYIGGTEA HDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDFPGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKL P
Specific function: Unknown
COG id: COG3023
COG function: function code V; Negative regulator of beta-lactamase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002502 - InterPro: IPR018247 - InterPro: IPR015510 [H]
Pfam domain/function: PF01510 Amidase_2 [H]
EC number: NA
Molecular weight: Translated: 17876; Mature: 17876
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGA CCCEEEEEEEEECCCCCCEECHHHHHHHHHHCCCEEECEEEEEEECCCCCCCCCHHHHCC HVQGHNATSIGICYIGGTEAHDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDF EECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKLP CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC >Mature Secondary Structure MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGA CCCEEEEEEEEECCCCCCEECHHHHHHHHHHCCCEEECEEEEEEECCCCCCCCCHHHHCC HVQGHNATSIGICYIGGTEAHDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDF EECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKLP CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]