Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158425225

Identifier: 158425225

GI number: 158425225

Start: 4131729

End: 4132214

Strand: Reverse

Name: 158425225

Synonym: AZC_3601

Alternate gene names: NA

Gene position: 4132214-4131729 (Counterclockwise)

Preceding gene: 158425226

Following gene: 158425224

Centisome position: 76.95

GC content: 65.23

Gene sequence:

>486_bases
ATGCGCAAGATCACACACATCGTCATCCACTGTGCGGCCACCCCGGAAGGCCGCGAGGTCTCCGTTAAGGAGATCGACCG
TTGGCACCGGGAGCGTGGCTTCGCCAAGATCGGCTATCACTACGTTATCCATCTCGACGGCTCGATTGATCCCGGCCGCT
CCGAGGAGGAGATCGGCGCCCACGTTCAGGGCCACAACGCCACGTCCATCGGCATCTGCTACATCGGGGGCACGGAAGCC
CACGACGTGAAGAAGCCGAAGGACACCCGCACCCCCGCTCAGAAGGCGGCAATGGAGCGGCTGGTGAAGGAGCTTCTGAC
CCGCTACCCCGGCGCTGAAGTGCTCGGCCACAACGACTTTCCCGGCGTGAACAAGGCGTGCCCTGCCTTCGACACCCGCA
AGTGGTGGGCCGAAGTCAGCAAGCGGGACGCCGCTCCCGCGCCGCAGCCGGCCTTCTGCAAGACCTGCGGCCAGAAGCTG
CCCTGA

Upstream 100 bases:

>100_bases
GACCACTTACGCCATGTGGTGTGAGAAGAACGGCTTCAAATACGCTGACCGCAGCATCCCCGCAGAGTGGCTGAAAGAGC
CCGCGCGGAACTGACAGACA

Downstream 100 bases:

>100_bases
TCCAACCCCCTCCCACAAACACCCTGAAGCCCTCGGCCCCGCGCCGGGGGCTTTTTCGCATCCAGCTTTTGAGCATCCCA
CGGAAAGGAGCGATATGAGC

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGAHVQGHNATSIGICYIGGTEA
HDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDFPGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKL
P

Sequences:

>Translated_161_residues
MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGAHVQGHNATSIGICYIGGTEA
HDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDFPGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKL
P
>Mature_161_residues
MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGAHVQGHNATSIGICYIGGTEA
HDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDFPGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKL
P

Specific function: Unknown

COG id: COG3023

COG function: function code V; Negative regulator of beta-lactamase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage T3 and T7 N-acetylmuramoyl-L-alanine amidases [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002502
- InterPro:   IPR018247
- InterPro:   IPR015510 [H]

Pfam domain/function: PF01510 Amidase_2 [H]

EC number: NA

Molecular weight: Translated: 17876; Mature: 17876

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGA
CCCEEEEEEEEECCCCCCEECHHHHHHHHHHCCCEEECEEEEEEECCCCCCCCCHHHHCC
HVQGHNATSIGICYIGGTEAHDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDF
EECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKLP
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MRKITHIVIHCAATPEGREVSVKEIDRWHRERGFAKIGYHYVIHLDGSIDPGRSEEEIGA
CCCEEEEEEEEECCCCCCEECHHHHHHHHHHCCCEEECEEEEEEECCCCCCCCCHHHHCC
HVQGHNATSIGICYIGGTEAHDVKKPKDTRTPAQKAAMERLVKELLTRYPGAEVLGHNDF
EECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PGVNKACPAFDTRKWWAEVSKRDAAPAPQPAFCKTCGQKLP
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]