| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425209
Identifier: 158425209
GI number: 158425209
Start: 4117762
End: 4118757
Strand: Reverse
Name: 158425209
Synonym: AZC_3585
Alternate gene names: NA
Gene position: 4118757-4117762 (Counterclockwise)
Preceding gene: 158425210
Following gene: 158425208
Centisome position: 76.7
GC content: 64.26
Gene sequence:
>996_bases ATGACCGACATCACTCCGTCCCGCCTTGGCCTCTCTGGTGGCACTGGCGCGGATGACGCTCTGTTCCTCAAGCAGTTCTC CGGTGAGGTCATGACGGCCTTCTCCGAGGTGAACGTCATGATGGAACGACACCTCGTGCGCACCATCACCAACGGCAAGT CGGCGCAGTTCCCTGCGACGTGGAAGGCTGATGCCTATTACCACGTCCCCGGCACCGAGCTTCAGGGCCAGTCGATCAAG CATGGCGAGCGCGTCATCACCATCGACGACCTTCTGGTGTCGCCGGTCTTCGTGGCGCAGATCGACGAAGCCAAGAACCA CTATGACGTGCGCTCGATCTACACCAACGAGTGCGGCTATGCCCTCGCCAATCAGGCGGACAAGAACGTCCTTCAGACGG CGGTTCTGGCTGCCCGCGCCTCTGCCACCATCACGGGCGGCATCGGCGGTTCCACTCTGGCCGTGGGGCCGGACATCGTG ACGAACGCCAACGGGGCACTGGTGAATGCCCTGTATCTGGCGGCTCAGACGCTGGACGAGAAGGACGTTCCCGAGCAGGG CCGCTTCGCCGTGTTCAAGCCGGCGCAGTATTACAAGCTCGTGCTGGACGACAAGGCGATCAACCGCGACTTCACCGCTG GCAACGGCGACATCCGCACCGGCAAGGTGTTCGACATCGCGGGCGTCCAGATCGTGAAGTCCAACCACCTGCCGACGAGC GCCATCGCCGCCCCGGCGGGCTCGGCCAACGTCCCCACCGGCGTCACCCCGCAGATCGGCCCGCGTCCGCTGGGCAAGTA TGCGGGCGACTTCAGCAACACCGCCGGCCTCGTGATGCACGCGAACGCCGTGGGCACGGTGAAGCTCATGGACCTGTCCG TCGAGGGTGAATACCTCATCACTCGTCAGGGCACGCTCATCGTTGCCAAGTACGCGATGGGCCACGGCATCCTGCGCCCT GAATGCGCAGTCGAGCTGTCCAAGTCCGCCACCTGA
Upstream 100 bases:
>100_bases CGCAGCCCTTGGCCCTCCGAGGAGGACAACCTTGTGTGCCTGCGAGCGTGTTCACGGGAAGCCTAGTCAGCTTCTCAACA TCCACAGGATTTACTAGGTA
Downstream 100 bases:
>100_bases TCGCGTAGCGACAGTCAGTCCTTGAGAATTGGGGGAGGTTCCATTGCAGGAACTTCCCCCTTTTTTTCGTCCATCGGTGC AGTGACTGCACTTCAGGGGC
Product: minor capsid protein 10
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTDITPSRLGLSGGTGADDALFLKQFSGEVMTAFSEVNVMMERHLVRTITNGKSAQFPATWKADAYYHVPGTELQGQSIK HGERVITIDDLLVSPVFVAQIDEAKNHYDVRSIYTNECGYALANQADKNVLQTAVLAARASATITGGIGGSTLAVGPDIV TNANGALVNALYLAAQTLDEKDVPEQGRFAVFKPAQYYKLVLDDKAINRDFTAGNGDIRTGKVFDIAGVQIVKSNHLPTS AIAAPAGSANVPTGVTPQIGPRPLGKYAGDFSNTAGLVMHANAVGTVKLMDLSVEGEYLITRQGTLIVAKYAMGHGILRP ECAVELSKSAT
Sequences:
>Translated_331_residues MTDITPSRLGLSGGTGADDALFLKQFSGEVMTAFSEVNVMMERHLVRTITNGKSAQFPATWKADAYYHVPGTELQGQSIK HGERVITIDDLLVSPVFVAQIDEAKNHYDVRSIYTNECGYALANQADKNVLQTAVLAARASATITGGIGGSTLAVGPDIV TNANGALVNALYLAAQTLDEKDVPEQGRFAVFKPAQYYKLVLDDKAINRDFTAGNGDIRTGKVFDIAGVQIVKSNHLPTS AIAAPAGSANVPTGVTPQIGPRPLGKYAGDFSNTAGLVMHANAVGTVKLMDLSVEGEYLITRQGTLIVAKYAMGHGILRP ECAVELSKSAT >Mature_330_residues TDITPSRLGLSGGTGADDALFLKQFSGEVMTAFSEVNVMMERHLVRTITNGKSAQFPATWKADAYYHVPGTELQGQSIKH GERVITIDDLLVSPVFVAQIDEAKNHYDVRSIYTNECGYALANQADKNVLQTAVLAARASATITGGIGGSTLAVGPDIVT NANGALVNALYLAAQTLDEKDVPEQGRFAVFKPAQYYKLVLDDKAINRDFTAGNGDIRTGKVFDIAGVQIVKSNHLPTSA IAAPAGSANVPTGVTPQIGPRPLGKYAGDFSNTAGLVMHANAVGTVKLMDLSVEGEYLITRQGTLIVAKYAMGHGILRPE CAVELSKSAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35012; Mature: 34881
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDITPSRLGLSGGTGADDALFLKQFSGEVMTAFSEVNVMMERHLVRTITNGKSAQFPAT CCCCCCHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE WKADAYYHVPGTELQGQSIKHGERVITIDDLLVSPVFVAQIDEAKNHYDVRSIYTNECGY ECCCEEEECCCCCCCCCCCCCCCEEEEEHHHHHCCEEEEEEHHHCCCEEHEEEEECCCCC ALANQADKNVLQTAVLAARASATITGGIGGSTLAVGPDIVTNANGALVNALYLAAQTLDE HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCEEECCCCHHHHHHHHHHHHCCC KDVPEQGRFAVFKPAQYYKLVLDDKAINRDFTAGNGDIRTGKVFDIAGVQIVKSNHLPTS CCCCCCCCEEEECCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCHH AIAAPAGSANVPTGVTPQIGPRPLGKYAGDFSNTAGLVMHANAVGTVKLMDLSVEGEYLI HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEE TRQGTLIVAKYAMGHGILRPECAVELSKSAT EECCCEEEEEEHHCCCCCCCHHHHEECCCCC >Mature Secondary Structure TDITPSRLGLSGGTGADDALFLKQFSGEVMTAFSEVNVMMERHLVRTITNGKSAQFPAT CCCCCHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE WKADAYYHVPGTELQGQSIKHGERVITIDDLLVSPVFVAQIDEAKNHYDVRSIYTNECGY ECCCEEEECCCCCCCCCCCCCCCEEEEEHHHHHCCEEEEEEHHHCCCEEHEEEEECCCCC ALANQADKNVLQTAVLAARASATITGGIGGSTLAVGPDIVTNANGALVNALYLAAQTLDE HHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCEEECCCCHHHHHHHHHHHHCCC KDVPEQGRFAVFKPAQYYKLVLDDKAINRDFTAGNGDIRTGKVFDIAGVQIVKSNHLPTS CCCCCCCCEEEECCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCHH AIAAPAGSANVPTGVTPQIGPRPLGKYAGDFSNTAGLVMHANAVGTVKLMDLSVEGEYLI HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCEEEEEEEEECCCEEE TRQGTLIVAKYAMGHGILRPECAVELSKSAT EECCCEEEEEEHHCCCCCCCHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA