| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425207
Identifier: 158425207
GI number: 158425207
Start: 4114697
End: 4117054
Strand: Reverse
Name: 158425207
Synonym: AZC_3583
Alternate gene names: NA
Gene position: 4117054-4114697 (Counterclockwise)
Preceding gene: 158425208
Following gene: 158425206
Centisome position: 76.67
GC content: 62.3
Gene sequence:
>2358_bases ATGCCGGTCATCTCCGGGTCCATCCCGAACCTCATCAATGGCGTGAGTCAGCAGCCCTTCGCGCTGCGGCTCGCCTCCCA AGCCGAGGAGCAGATCAACGGCTTCAGCTCCATCGTGGAGGGCCTGACCAAGCGGCCCCCGACGCGGCACGTCGCGAAGC TCATCAACTCGCTCCCCGAGAATGCCCACGTTCACATCATCAACCGGGACGCCGCCGAGCGTTACGTGGTGGTGGCGTTC AATGGTGACCTCAGGGTGTACGGGTTCGACGGTGTCGAGCGAACCGTGAACTTCCCGCATGGTAAGGGCTATCTGGCGAA CACGTCGGCCAGCTTTGGCGCGGTCACGGTCGCGGATTACACCTTCTTCCTGAACAAGGATGTCACGGTCGCGATGTCCC CGGAGACGAAGGCCGGGCGGCCTCCCGAGGGCATCGTCTTCGTGCGGCAGGGCAATTACGCCTGCAAGTACCGCATCATC GTTGACGGGCAGGCGGTGGCCGAAAAGATCACCTCTCAGACTGACCCGAACGACATTCAGTCCAGCAAGATCGCGCAGGA CCTAGCGGCAATCATCAACTCGTGGGGTTCCATGGTGGCGAGCGTCATTGGCTCGACCATCCACATTCGACGGGCCGACA GCCTCGGCTTCTCCCTCACCACGGAAGACAGCCTCGGGGACACCGGCCTCGTCTGCATGACCAAGCAGACGCAGACCTTC GCCAACCTCCCGGCCCGCGCCGTGCAGGGCTATCAGGTCGAAATCTCGGGCACCCCCGGCAACCCCTACGACAACTTCTG GGTGGAGTACGATCAGGCCGGATCAGGAGGCAACAACGGCGTTTGGCGGGAGATCGCCGCGCCGGGACGCCAGATCGCCT TCGACCCCGCCACCATGCCCCATGTGCTGGTACGCGAGGCGAACGGGAGCTTCACCTTCAAGCAGGCGGATTGGGAGAAG TGCGCCGCTGGCTCCGATGAGACCACCCCGCGCCCGTCGTTCGTTGGGCAGCGGATCAGCGACATCTTCTTCTACCGCAA CCGCCTCGGGTTCATCTCCGACGAGAGCGTGATTTTCTCGCGCTCGGCCAAGTTCTTCAACTTCTGGCGGGAGACCGCCA CGGACCTCCTCGATACGGACCCCATCGACATCACCACGTCGCACGTCAAGGTGTCGATCCTGCGCCATGCGATCCCCTTC AACGAGAGCCTGCTTCTGTTCTCCGATCAGACGCAATTCATGCTCGGGGCAGGGGAGGTGCTGACACCCTCGGGTGTGTC TCTGGATCAGGTCACCGAGTTCGAGACGTCCAGCCGGGCGAAGCCGGTGGGTGCGGGGCAGTTCGTCTATTTCTGCACCA GCCGGGGCGAGTTCACAGGTGTTCGTGAATACTACATCGACGGGTCCACAAAGACCAACAACGCGAACGATGTCACGAAC CATGTGCCTCGCTATATCCGGGGCAAGGTCTTCAAGCTCTGTGCCTCGACCAATGAGGACATGCTTGTTGCGCTGTCTGA TACTGACCGGGACACGCTCTATGTGTACAAGTATTACAACAGCGGGCAGGAGAAGGTTCAATCGAGCTGGTCGCGCTGGA AGCTTCAGCCCGGCGACGTGATCCTCAACGCGGAGTTCATCGAGAGCACGCTTTGGCTGATCGTGCGGCGGGCGGATGGC GTCTATCTCGACAGGCTCAACATCGAGCCGGGCGTGACGGACCCCGGAATGGCCTTTGTGGTCCATCTGGATCGGCGCAT CACCGAGGCTCAGGCCGAGGCGCGGTTCTACTATCCGCAACCGAACGTCACCCACATCGTCCTGCCCTACGTCCCGCCCG ATCCGAAGGCGGTTGTCATCGTGGCGCGGCCCGGCGGCAGTGTCCCCGCTGGCAAGGTGATGCCCTACAAGCTCATCTGG AATGGTGCCGTGTGGGTCTATGAGGTGGCCGGAAACCTCACCCACTTCTATGCCGGTATCACCTACGAGCTGCGGTACAC CTTCTCGCCCTTCCTCATCCGCGAGGACGCCCCCGGCGGTGGGCGCGTGGCGAATACCGAGGGACGCATTCAGGTCCGGC GTTGCCTCCTGAACTACGCCGAGACGGGCTATTTCCGGGTCGAGGTCACGCCCTACCGGAGGGAGACGCAGGTCTATCCC TTCACGGGCCGCATCGTGGGTTCGGGCATGAACCGGCTCGGACAGGTGAATGTGGAGACCGGGTCTTTCCGGTTCTCGGT CATGGCGAGCAACATGAACGTCAAGATCGAGCTGGTGAACGACACGCACCTTCCTTCGCGCCATCTCAATCTCGATTGGG AGGCCCTGTACACCGTCCGAACCAAGCGGATGCAGTGA
Upstream 100 bases:
>100_bases CAACGCCGAGGCTGAGACCGCCGATTACAACATGCTGAGCGATAGCTGGGCCGTGGGCCGCGTGCTCAACCGGCGCTCGG GGGGCTTCGAGGGATAGCCG
Downstream 100 bases:
>100_bases TGCCGCTCTACCGCGACGCGACCCTTGCGGACTGCGAGGCGATGGCCCCGCGCCTCCGCGAGGCGGACAGGCAGGAACTG AAGGCGTTCGACGGCAGCGA
Product: tail tubular protein B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 785; Mature: 784
Protein sequence:
>785_residues MPVISGSIPNLINGVSQQPFALRLASQAEEQINGFSSIVEGLTKRPPTRHVAKLINSLPENAHVHIINRDAAERYVVVAF NGDLRVYGFDGVERTVNFPHGKGYLANTSASFGAVTVADYTFFLNKDVTVAMSPETKAGRPPEGIVFVRQGNYACKYRII VDGQAVAEKITSQTDPNDIQSSKIAQDLAAIINSWGSMVASVIGSTIHIRRADSLGFSLTTEDSLGDTGLVCMTKQTQTF ANLPARAVQGYQVEISGTPGNPYDNFWVEYDQAGSGGNNGVWREIAAPGRQIAFDPATMPHVLVREANGSFTFKQADWEK CAAGSDETTPRPSFVGQRISDIFFYRNRLGFISDESVIFSRSAKFFNFWRETATDLLDTDPIDITTSHVKVSILRHAIPF NESLLLFSDQTQFMLGAGEVLTPSGVSLDQVTEFETSSRAKPVGAGQFVYFCTSRGEFTGVREYYIDGSTKTNNANDVTN HVPRYIRGKVFKLCASTNEDMLVALSDTDRDTLYVYKYYNSGQEKVQSSWSRWKLQPGDVILNAEFIESTLWLIVRRADG VYLDRLNIEPGVTDPGMAFVVHLDRRITEAQAEARFYYPQPNVTHIVLPYVPPDPKAVVIVARPGGSVPAGKVMPYKLIW NGAVWVYEVAGNLTHFYAGITYELRYTFSPFLIREDAPGGGRVANTEGRIQVRRCLLNYAETGYFRVEVTPYRRETQVYP FTGRIVGSGMNRLGQVNVETGSFRFSVMASNMNVKIELVNDTHLPSRHLNLDWEALYTVRTKRMQ
Sequences:
>Translated_785_residues MPVISGSIPNLINGVSQQPFALRLASQAEEQINGFSSIVEGLTKRPPTRHVAKLINSLPENAHVHIINRDAAERYVVVAF NGDLRVYGFDGVERTVNFPHGKGYLANTSASFGAVTVADYTFFLNKDVTVAMSPETKAGRPPEGIVFVRQGNYACKYRII VDGQAVAEKITSQTDPNDIQSSKIAQDLAAIINSWGSMVASVIGSTIHIRRADSLGFSLTTEDSLGDTGLVCMTKQTQTF ANLPARAVQGYQVEISGTPGNPYDNFWVEYDQAGSGGNNGVWREIAAPGRQIAFDPATMPHVLVREANGSFTFKQADWEK CAAGSDETTPRPSFVGQRISDIFFYRNRLGFISDESVIFSRSAKFFNFWRETATDLLDTDPIDITTSHVKVSILRHAIPF NESLLLFSDQTQFMLGAGEVLTPSGVSLDQVTEFETSSRAKPVGAGQFVYFCTSRGEFTGVREYYIDGSTKTNNANDVTN HVPRYIRGKVFKLCASTNEDMLVALSDTDRDTLYVYKYYNSGQEKVQSSWSRWKLQPGDVILNAEFIESTLWLIVRRADG VYLDRLNIEPGVTDPGMAFVVHLDRRITEAQAEARFYYPQPNVTHIVLPYVPPDPKAVVIVARPGGSVPAGKVMPYKLIW NGAVWVYEVAGNLTHFYAGITYELRYTFSPFLIREDAPGGGRVANTEGRIQVRRCLLNYAETGYFRVEVTPYRRETQVYP FTGRIVGSGMNRLGQVNVETGSFRFSVMASNMNVKIELVNDTHLPSRHLNLDWEALYTVRTKRMQ >Mature_784_residues PVISGSIPNLINGVSQQPFALRLASQAEEQINGFSSIVEGLTKRPPTRHVAKLINSLPENAHVHIINRDAAERYVVVAFN GDLRVYGFDGVERTVNFPHGKGYLANTSASFGAVTVADYTFFLNKDVTVAMSPETKAGRPPEGIVFVRQGNYACKYRIIV DGQAVAEKITSQTDPNDIQSSKIAQDLAAIINSWGSMVASVIGSTIHIRRADSLGFSLTTEDSLGDTGLVCMTKQTQTFA NLPARAVQGYQVEISGTPGNPYDNFWVEYDQAGSGGNNGVWREIAAPGRQIAFDPATMPHVLVREANGSFTFKQADWEKC AAGSDETTPRPSFVGQRISDIFFYRNRLGFISDESVIFSRSAKFFNFWRETATDLLDTDPIDITTSHVKVSILRHAIPFN ESLLLFSDQTQFMLGAGEVLTPSGVSLDQVTEFETSSRAKPVGAGQFVYFCTSRGEFTGVREYYIDGSTKTNNANDVTNH VPRYIRGKVFKLCASTNEDMLVALSDTDRDTLYVYKYYNSGQEKVQSSWSRWKLQPGDVILNAEFIESTLWLIVRRADGV YLDRLNIEPGVTDPGMAFVVHLDRRITEAQAEARFYYPQPNVTHIVLPYVPPDPKAVVIVARPGGSVPAGKVMPYKLIWN GAVWVYEVAGNLTHFYAGITYELRYTFSPFLIREDAPGGGRVANTEGRIQVRRCLLNYAETGYFRVEVTPYRRETQVYPF TGRIVGSGMNRLGQVNVETGSFRFSVMASNMNVKIELVNDTHLPSRHLNLDWEALYTVRTKRMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87289; Mature: 87158
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVISGSIPNLINGVSQQPFALRLASQAEEQINGFSSIVEGLTKRPPTRHVAKLINSLPE CCCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC NAHVHIINRDAAERYVVVAFNGDLRVYGFDGVERTVNFPHGKGYLANTSASFGAVTVADY CCEEEEEECCCCCEEEEEEECCCEEEEECCCCHHEECCCCCCCEEEECCCCCCEEEEEEE TFFLNKDVTVAMSPETKAGRPPEGIVFVRQGNYACKYRIIVDGQAVAEKITSQTDPNDIQ EEEECCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHCCCCCCHHH SSKIAQDLAAIINSWGSMVASVIGSTIHIRRADSLGFSLTTEDSLGDTGLVCMTKQTQTF HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCHHH ANLPARAVQGYQVEISGTPGNPYDNFWVEYDQAGSGGNNGVWREIAAPGRQIAFDPATMP HCCCHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEHHHCCCCCEEEECCCCCC HVLVREANGSFTFKQADWEKCAAGSDETTPRPSFVGQRISDIFFYRNRLGFISDESVIFS EEEEEECCCCEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE RSAKFFNFWRETATDLLDTDPIDITTSHVKVSILRHAIPFNESLLLFSDQTQFMLGAGEV CCHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEHHHCCCCCCEEEEEECCCEEEEECCCE LTPSGVSLDQVTEFETSSRAKPVGAGQFVYFCTSRGEFTGVREYYIDGSTKTNNANDVTN ECCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHH HVPRYIRGKVFKLCASTNEDMLVALSDTDRDTLYVYKYYNSGQEKVQSSWSRWKLQPGDV HHHHHHHHHHHEECCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHEECCCCCE ILNAEFIESTLWLIVRRADGVYLDRLNIEPGVTDPGMAFVVHLDRRITEAQAEARFYYPQ EEEHHHHHHEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECHHHHHHHCCCEEECCC PNVTHIVLPYVPPDPKAVVIVARPGGSVPAGKVMPYKLIWNGAVWVYEVAGNLTHFYAGI CCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEE TYELRYTFSPFLIREDAPGGGRVANTEGRIQVRRCLLNYAETGYFRVEVTPYRRETQVYP EEEEEEECCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEE FTGRIVGSGMNRLGQVNVETGSFRFSVMASNMNVKIELVNDTHLPSRHLNLDWEALYTVR EECEEECCCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHEEEEE TKRMQ HHCCC >Mature Secondary Structure PVISGSIPNLINGVSQQPFALRLASQAEEQINGFSSIVEGLTKRPPTRHVAKLINSLPE CCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC NAHVHIINRDAAERYVVVAFNGDLRVYGFDGVERTVNFPHGKGYLANTSASFGAVTVADY CCEEEEEECCCCCEEEEEEECCCEEEEECCCCHHEECCCCCCCEEEECCCCCCEEEEEEE TFFLNKDVTVAMSPETKAGRPPEGIVFVRQGNYACKYRIIVDGQAVAEKITSQTDPNDIQ EEEECCCEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEEECCHHHHHHHHCCCCCCHHH SSKIAQDLAAIINSWGSMVASVIGSTIHIRRADSLGFSLTTEDSLGDTGLVCMTKQTQTF HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCHHH ANLPARAVQGYQVEISGTPGNPYDNFWVEYDQAGSGGNNGVWREIAAPGRQIAFDPATMP HCCCHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEHHHCCCCCEEEECCCCCC HVLVREANGSFTFKQADWEKCAAGSDETTPRPSFVGQRISDIFFYRNRLGFISDESVIFS EEEEEECCCCEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE RSAKFFNFWRETATDLLDTDPIDITTSHVKVSILRHAIPFNESLLLFSDQTQFMLGAGEV CCHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEHHHCCCCCCEEEEEECCCEEEEECCCE LTPSGVSLDQVTEFETSSRAKPVGAGQFVYFCTSRGEFTGVREYYIDGSTKTNNANDVTN ECCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHH HVPRYIRGKVFKLCASTNEDMLVALSDTDRDTLYVYKYYNSGQEKVQSSWSRWKLQPGDV HHHHHHHHHHHEECCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHEECCCCCE ILNAEFIESTLWLIVRRADGVYLDRLNIEPGVTDPGMAFVVHLDRRITEAQAEARFYYPQ EEEHHHHHHEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECHHHHHHHCCCEEECCC PNVTHIVLPYVPPDPKAVVIVARPGGSVPAGKVMPYKLIWNGAVWVYEVAGNLTHFYAGI CCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEE TYELRYTFSPFLIREDAPGGGRVANTEGRIQVRRCLLNYAETGYFRVEVTPYRRETQVYP EEEEEEECCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEE FTGRIVGSGMNRLGQVNVETGSFRFSVMASNMNVKIELVNDTHLPSRHLNLDWEALYTVR EECEEECCCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHEEEEE TKRMQ HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA