| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425203
Identifier: 158425203
GI number: 158425203
Start: 4105809
End: 4107410
Strand: Reverse
Name: 158425203
Synonym: AZC_3579
Alternate gene names: NA
Gene position: 4107410-4105809 (Counterclockwise)
Preceding gene: 158425204
Following gene: 158425202
Centisome position: 76.49
GC content: 65.29
Gene sequence:
>1602_bases ATGGCTCTTTCCTACGCTCAGTATCAGGGGAACGGTTCGCAGCAGACCTTCGCGGTTCCGTTCCCCTATCTGGATCGGTC CCACATTCAGGTCCGCGTTGCGCTCGACCTGTCCGGTTTCACTTGGGACGATCCTCAGACCATCCGCATCACCCCGGCCC CTGCACCGGGCGCGGTGGTCGAAATCCGCCGGGTGACCCCGCGCGAAAACCGAATGGTGGACTTCGTGGACGGTTCGGTG CTCACCGAAAGCGACCTCGACCTCGCCAACATCCAGACCTTCTACATCGTGCAGGAGGCCATAGACATCGCCGGGGGCAC CCTTGAGCTGCTTTCCGATGGGTCCTATGGCGCGGGTGGTCGGCGCATCAAGAACGTGGGCACCGCCATCGAGCCGCGTG ACGCGATCACGAAGGAATATCACGACGGCGTCTTCCTGCCGCAGATGAACTCGCTCCTCTCTCAGGGAGTGGCTGCGCGG GATGTCGCGGTCTCGGCGCGGGACCTGGCACTCGCGGCACGGGACACCGCCAACGCCGCCCGTGACACGGCGCTTCAGTA TCGTGATGAGGCGGGCGGGCACCGCTCCGCTGCGGCCACCCACGAAGCCAATGCGTGGACGCACCGGCAGGCAGCCGCCG GCCATGAGGCGAATGCCGGCTCTCACTCGGCTTCGGCGCAGTCTTCGGCCTCTACGGCGGTTGGCGCTCGGGATGCGGCG CAGACCTATCGCAACGCTGCCGAGACGTTCCGCAATGACGCCAGCCGGTTCCGCAATGAGGCTGAGACGTTCCGCAATCA GGCCGCTCAGAGCGCAGCCAATGCGGCTCTCTGGAACCCGAGCAGCTATTACACCCGGAGCGAGGCGGACGGGCGCTATC TCCTGCTTACCGGCGGGACGATCACGGACAGCCTGCACATCTACAACGATGCCCCGACGCTGGGGCTTCGCGACAGGGAC GGCCGGACGGCTTGGCTGCACTGCAACGGCGGGAGCTTCTATGTCCTTTCCGGGCCTCCGAACTCGGTGGGCGCGGATCG TGGCGAGTTCTTCGTTGACCTGAACACGGGCGCGGTGTGGTGCCGCCAGCTTGGCGACCTGAACACCCGCATTGAGGAAC GCGCTGCGGCGTGGGCCGGGGGGCGGGTGTCGAAGGGTGGGGACACCATGACCGGCGACCTCATGATTGAGAAGTTCGAC GCCGCGTTGCGGCTGCACTCGCCCAACATCTCCATCTGGACCGCCCTCGCGGCGAGCAACGGCGAGTATCAGCTTCACAA CACGTCCGGCGTCCGCATGGCGGTGAACCCCGACGGTTATGTCTGGGCAGCGCCCTACGGCTTCCTTCACGACTACATCA ACACGGTCGCGAACGACCGGGGGTATGCGCAAGCGAACGCCCTCGATTATGTCCACCGTGTCCGCATCACCGGCTATGGC GAGGCGGGTTTCCCCGGCTCCCCTCAGTGGACCCACGCCAGCCCGAACGTCATCACGGGCGTTCGATGGAGCTGGAACGG GTTCGTGGATGCCATCGGCTACCGGTCCCTTCAAGTTTACCTGCCGAAGCACGGCGGGTGGCACGCAATCTATGACGAAT GA
Upstream 100 bases:
>100_bases GCCGCAGGAGCGGACACCCGCCCGACCCGGTCAAGTGCAGTGACTGCACCAATCAGGCCCCCGGATCACTCCGGGGGTCT TTCTCTAACAGAGGAGACGA
Downstream 100 bases:
>100_bases GAACGCATGAAGCCCATTGCTGACCTCGGCGTGTGGGAGGTCTATAAGCCCGACCTTCCCGCCGATGACCCGCGTCCGGC CCTGCGCGTGGCCTTCTTCA
Product: phage tail fiber protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MALSYAQYQGNGSQQTFAVPFPYLDRSHIQVRVALDLSGFTWDDPQTIRITPAPAPGAVVEIRRVTPRENRMVDFVDGSV LTESDLDLANIQTFYIVQEAIDIAGGTLELLSDGSYGAGGRRIKNVGTAIEPRDAITKEYHDGVFLPQMNSLLSQGVAAR DVAVSARDLALAARDTANAARDTALQYRDEAGGHRSAAATHEANAWTHRQAAAGHEANAGSHSASAQSSASTAVGARDAA QTYRNAAETFRNDASRFRNEAETFRNQAAQSAANAALWNPSSYYTRSEADGRYLLLTGGTITDSLHIYNDAPTLGLRDRD GRTAWLHCNGGSFYVLSGPPNSVGADRGEFFVDLNTGAVWCRQLGDLNTRIEERAAAWAGGRVSKGGDTMTGDLMIEKFD AALRLHSPNISIWTALAASNGEYQLHNTSGVRMAVNPDGYVWAAPYGFLHDYINTVANDRGYAQANALDYVHRVRITGYG EAGFPGSPQWTHASPNVITGVRWSWNGFVDAIGYRSLQVYLPKHGGWHAIYDE
Sequences:
>Translated_533_residues MALSYAQYQGNGSQQTFAVPFPYLDRSHIQVRVALDLSGFTWDDPQTIRITPAPAPGAVVEIRRVTPRENRMVDFVDGSV LTESDLDLANIQTFYIVQEAIDIAGGTLELLSDGSYGAGGRRIKNVGTAIEPRDAITKEYHDGVFLPQMNSLLSQGVAAR DVAVSARDLALAARDTANAARDTALQYRDEAGGHRSAAATHEANAWTHRQAAAGHEANAGSHSASAQSSASTAVGARDAA QTYRNAAETFRNDASRFRNEAETFRNQAAQSAANAALWNPSSYYTRSEADGRYLLLTGGTITDSLHIYNDAPTLGLRDRD GRTAWLHCNGGSFYVLSGPPNSVGADRGEFFVDLNTGAVWCRQLGDLNTRIEERAAAWAGGRVSKGGDTMTGDLMIEKFD AALRLHSPNISIWTALAASNGEYQLHNTSGVRMAVNPDGYVWAAPYGFLHDYINTVANDRGYAQANALDYVHRVRITGYG EAGFPGSPQWTHASPNVITGVRWSWNGFVDAIGYRSLQVYLPKHGGWHAIYDE >Mature_532_residues ALSYAQYQGNGSQQTFAVPFPYLDRSHIQVRVALDLSGFTWDDPQTIRITPAPAPGAVVEIRRVTPRENRMVDFVDGSVL TESDLDLANIQTFYIVQEAIDIAGGTLELLSDGSYGAGGRRIKNVGTAIEPRDAITKEYHDGVFLPQMNSLLSQGVAARD VAVSARDLALAARDTANAARDTALQYRDEAGGHRSAAATHEANAWTHRQAAAGHEANAGSHSASAQSSASTAVGARDAAQ TYRNAAETFRNDASRFRNEAETFRNQAAQSAANAALWNPSSYYTRSEADGRYLLLTGGTITDSLHIYNDAPTLGLRDRDG RTAWLHCNGGSFYVLSGPPNSVGADRGEFFVDLNTGAVWCRQLGDLNTRIEERAAAWAGGRVSKGGDTMTGDLMIEKFDA ALRLHSPNISIWTALAASNGEYQLHNTSGVRMAVNPDGYVWAAPYGFLHDYINTVANDRGYAQANALDYVHRVRITGYGE AGFPGSPQWTHASPNVITGVRWSWNGFVDAIGYRSLQVYLPKHGGWHAIYDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57767; Mature: 57636
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSYAQYQGNGSQQTFAVPFPYLDRSHIQVRVALDLSGFTWDDPQTIRITPAPAPGAVV CCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCEE EIRRVTPRENRMVDFVDGSVLTESDLDLANIQTFYIVQEAIDIAGGTLELLSDGSYGAGG EEEECCCCCCCEEEEECCCEEECCCCCHHHCEEEEEEHHHHHHCCCEEEEECCCCCCCCC RRIKNVGTAIEPRDAITKEYHDGVFLPQMNSLLSQGVAARDVAVSARDLALAARDTANAA CCHHHCCCCCCCHHHHHHHHCCCEECHHHHHHHHCCCCHHHEEECHHHEEEEECCCCCHH RDTALQYRDEAGGHRSAAATHEANAWTHRQAAAGHEANAGSHSASAQSSASTAVGARDAA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHH QTYRNAAETFRNDASRFRNEAETFRNQAAQSAANAALWNPSSYYTRSEADGRYLLLTGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHCCCCCCCCCCEEEEECCE ITDSLHIYNDAPTLGLRDRDGRTAWLHCNGGSFYVLSGPPNSVGADRGEFFVDLNTGAVW EECEEEEECCCCCCCEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCHHH CRQLGDLNTRIEERAAAWAGGRVSKGGDTMTGDLMIEKFDAALRLHSPNISIWTALAASN HHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEHHHEEEEECCEEEEECCCCEEEEEEECCC GEYQLHNTSGVRMAVNPDGYVWAAPYGFLHDYINTVANDRGYAQANALDYVHRVRITGYG CCEEEECCCCEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEECC EAGFPGSPQWTHASPNVITGVRWSWNGFVDAIGYRSLQVYLPKHGGWHAIYDE CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCEEEEEEECCCCCEEEECCC >Mature Secondary Structure ALSYAQYQGNGSQQTFAVPFPYLDRSHIQVRVALDLSGFTWDDPQTIRITPAPAPGAVV CCEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCEE EIRRVTPRENRMVDFVDGSVLTESDLDLANIQTFYIVQEAIDIAGGTLELLSDGSYGAGG EEEECCCCCCCEEEEECCCEEECCCCCHHHCEEEEEEHHHHHHCCCEEEEECCCCCCCCC RRIKNVGTAIEPRDAITKEYHDGVFLPQMNSLLSQGVAARDVAVSARDLALAARDTANAA CCHHHCCCCCCCHHHHHHHHCCCEECHHHHHHHHCCCCHHHEEECHHHEEEEECCCCCHH RDTALQYRDEAGGHRSAAATHEANAWTHRQAAAGHEANAGSHSASAQSSASTAVGARDAA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHH QTYRNAAETFRNDASRFRNEAETFRNQAAQSAANAALWNPSSYYTRSEADGRYLLLTGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHCCCCCCCCCCEEEEECCE ITDSLHIYNDAPTLGLRDRDGRTAWLHCNGGSFYVLSGPPNSVGADRGEFFVDLNTGAVW EECEEEEECCCCCCCEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCHHH CRQLGDLNTRIEERAAAWAGGRVSKGGDTMTGDLMIEKFDAALRLHSPNISIWTALAASN HHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEHHHEEEEECCEEEEECCCCEEEEEEECCC GEYQLHNTSGVRMAVNPDGYVWAAPYGFLHDYINTVANDRGYAQANALDYVHRVRITGYG CCEEEECCCCEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEECC EAGFPGSPQWTHASPNVITGVRWSWNGFVDAIGYRSLQVYLPKHGGWHAIYDE CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCEEEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA