| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425109
Identifier: 158425109
GI number: 158425109
Start: 4002027
End: 4002884
Strand: Direct
Name: 158425109
Synonym: AZC_3485
Alternate gene names: NA
Gene position: 4002027-4002884 (Clockwise)
Preceding gene: 158425108
Following gene: 158425110
Centisome position: 74.53
GC content: 67.37
Gene sequence:
>858_bases ATGAGCATGCAGTCATCACAACTGCCTTCGCGCGCGGGCATCGGCTTCAAGCCGCAGCACTTCGCGGACATCGTGGCCTC CCGCCAGCCCCTCGGCTTCTTCGAGGTGCATGCGGAGAACTACATGGGCGCCGGCGGCCCGCCCCATGCCCAGCTCCGCC GGCTGCGGGAGGATTATGCCCTCTCGATCCATGGCGTCGGCCTGTCCATCGGCGCCATGCAGCCGCTCGATGCGGACCAT CTTGAGCGCCTGCGCCTCCTGTGTGATCGCTACGAGCCGGAGAGCTTTTCGGAGCACCTCGCCTGGTCGAGCCACGACAG CGTCTATCTCAATGACCTGCTGCCCCTGCCCTATACGGACGGGACGCTCAGCCGCGTGGTGGAGCATGTGGACCGCGTGC AAACGCGCCTCCGGCGGCAGATGCTGCTGGAGAATCCGGCCACCTATCTCACCTTCGCCGAGAGCACCCTCGCGGAGACC GATTTCCTCGCCGAAGTGGCCCGGCGGGCCGGCTGCGGCCTGCTGCTGGACGTGAACAACGTCTTCGTGGCGGCCACGAA CCACAATACGGACCCCGCCGCCTATCTCGCCCGCTTTCCTCTCGAGGCGGTCCGCGAAATCCACCTGAGCGGGCATTCGC GGACCACGGACGAGACCGGCGCGCCCCTGCTCATCGATTCCCACGACACGCCGGTCACCGACCCTGTGTGGGCGCTCTAT GCGGACGTCATTGCGCGAACCGGCCCCGTACCGACGCTGATCGAATGGGACAATGACGTGCCCGCCTGGCCGATCTTGCG CGCCGAGGCCCTGCGCGCTGAGACGGTGCTCGCAGGCGCTCGGCAGAATGCGGCGTGA
Upstream 100 bases:
>100_bases GGCGGCATGGGTTCGCTGAAGCAGGGTCCCGCTCCCGTCTGAGACACACCGACACGCCCCGCGCGGCGCCCGAGGGCGCC GCGCATCCGCCTTCGAGGAG
Downstream 100 bases:
>100_bases GGGCACCATGATGAGCGCCCTCCCCGCCGCCCAAAGCGCATTTGCCGCCGCTCTCACCACGGCTGATGCGCCGATGCCGG TCGGCCTCGTGTGCTGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSMQSSQLPSRAGIGFKPQHFADIVASRQPLGFFEVHAENYMGAGGPPHAQLRRLREDYALSIHGVGLSIGAMQPLDADH LERLRLLCDRYEPESFSEHLAWSSHDSVYLNDLLPLPYTDGTLSRVVEHVDRVQTRLRRQMLLENPATYLTFAESTLAET DFLAEVARRAGCGLLLDVNNVFVAATNHNTDPAAYLARFPLEAVREIHLSGHSRTTDETGAPLLIDSHDTPVTDPVWALY ADVIARTGPVPTLIEWDNDVPAWPILRAEALRAETVLAGARQNAA
Sequences:
>Translated_285_residues MSMQSSQLPSRAGIGFKPQHFADIVASRQPLGFFEVHAENYMGAGGPPHAQLRRLREDYALSIHGVGLSIGAMQPLDADH LERLRLLCDRYEPESFSEHLAWSSHDSVYLNDLLPLPYTDGTLSRVVEHVDRVQTRLRRQMLLENPATYLTFAESTLAET DFLAEVARRAGCGLLLDVNNVFVAATNHNTDPAAYLARFPLEAVREIHLSGHSRTTDETGAPLLIDSHDTPVTDPVWALY ADVIARTGPVPTLIEWDNDVPAWPILRAEALRAETVLAGARQNAA >Mature_284_residues SMQSSQLPSRAGIGFKPQHFADIVASRQPLGFFEVHAENYMGAGGPPHAQLRRLREDYALSIHGVGLSIGAMQPLDADHL ERLRLLCDRYEPESFSEHLAWSSHDSVYLNDLLPLPYTDGTLSRVVEHVDRVQTRLRRQMLLENPATYLTFAESTLAETD FLAEVARRAGCGLLLDVNNVFVAATNHNTDPAAYLARFPLEAVREIHLSGHSRTTDETGAPLLIDSHDTPVTDPVWALYA DVIARTGPVPTLIEWDNDVPAWPILRAEALRAETVLAGARQNAA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 31506; Mature: 31375
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMQSSQLPSRAGIGFKPQHFADIVASRQPLGFFEVHAENYMGAGGPPHAQLRRLREDYA CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHE LSIHGVGLSIGAMQPLDADHLERLRLLCDRYEPESFSEHLAWSSHDSVYLNDLLPLPYTD EEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEECCCCCCCCC GTLSRVVEHVDRVQTRLRRQMLLENPATYLTFAESTLAETDFLAEVARRAGCGLLLDVNN HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECC VFVAATNHNTDPAAYLARFPLEAVREIHLSGHSRTTDETGAPLLIDSHDTPVTDPVWALY EEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH ADVIARTGPVPTLIEWDNDVPAWPILRAEALRAETVLAGARQNAA HHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SMQSSQLPSRAGIGFKPQHFADIVASRQPLGFFEVHAENYMGAGGPPHAQLRRLREDYA CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHE LSIHGVGLSIGAMQPLDADHLERLRLLCDRYEPESFSEHLAWSSHDSVYLNDLLPLPYTD EEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEECCCCCCCCC GTLSRVVEHVDRVQTRLRRQMLLENPATYLTFAESTLAETDFLAEVARRAGCGLLLDVNN HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEECC VFVAATNHNTDPAAYLARFPLEAVREIHLSGHSRTTDETGAPLLIDSHDTPVTDPVWALY EEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHH ADVIARTGPVPTLIEWDNDVPAWPILRAEALRAETVLAGARQNAA HHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA