Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is epsN [H]

Identifier: 158425094

GI number: 158425094

Start: 3987836

End: 3988999

Strand: Direct

Name: epsN [H]

Synonym: AZC_3470

Alternate gene names: 158425094

Gene position: 3987836-3988999 (Clockwise)

Preceding gene: 158425093

Following gene: 158425095

Centisome position: 74.26

GC content: 66.15

Gene sequence:

>1164_bases
ATGATCACTTCGGCGGAGCGCATTCCTGTGGCCGGTCCTTCCATCACGGACCGGGAGGCGGAGCTCGCCGCCGAAGCGGC
ACGCACCGCCTGGTACGCCAATCATTACGCCTATAATGCGCGCTTCGAGAAGATGATGGCGGACTATGTGGGCGTCGGCC
ATGCCGTCAGTGTCCCCCATGCCACGTCCGCCCTGCACCTGATCTTCGCGGCTCTCGGCATCGGCCCCGGCGACGAGGTC
ATCGTGCCGGACGTGACCTGGATCGCCTCCGTCGCTCCCATCGTGCATCTCGGCGCGACGCCTATCCTCGTCGATATCCT
CCCCGATACATGGTGCATCGATCCTGCGGCCGTGGAAGCCGCCATCGGCCCGTGCACCAAGGCGATCCTCGGCGTCGATC
TCTACGGCTCCATGTGCGACTGGCCGACCCTTCAGGCCATCGCCGACCGCCACGGCCTGTATCTCGTGGAGGACGCTGCC
GAGGCGCTCGGTTCCTCCCTCAACGGGCGCCGCGCCGGCGCCTTCGGACGTGCGGCCGCCTTCAGCTTCCACGGCTCGAA
GACGGTGGCCACCGGCGAGGGGGGCATGTTCGTGACCGATGATCCCGAACTCAACGCCCGCGTGCTCTTCCTGCGCGACC
ATGGCCGCAAGCCGGGGGACCGCTTCTTCCAGAACCACGAGATCGCGTTCAAGTACCGCATGAATGCGGTCACCGCCGCC
CTCGGCATCGCCCAGATGGAGCGCATCGATGCGCTCATCGCGCACAAGCGCGCCATCTATGGCTGGTATCACGACCGCCT
CGCCGACATGGACGGCCTGACGCTGAACTGCGAGCCCGAGGGCGTGTCCAATTCCTACTGGATGGTGACGGCCGTCCCCT
GCGAGGCCTATGGCTTCGACAAATTCGCCCTGATGGCCGAGATGGAGCGCCGGAACATCGACACCCGGCCCTTCTTCTCG
CCGCTCTCCAGCCTTCCCGCCTTCGACGCGCATCCCGAAGCCAAGCGCTTCGTGACGCCGAACGACTGCGGGCAGTTCAT
CGCCCGGGTCGGCATCAACCTGCCGTCGGGCTACAACATGACCGAAGAAAAGGTCGACATCGTCTGTGCCGCCTTCCGCG
AAGTGCTCGCCGGTGGCCGGACGCATCGCGTGGCAGCGGAATGA

Upstream 100 bases:

>100_bases
GATTGCCGAAGTATTCGCGGGCAAAGGCCAGGAAGGCAGGCTTGGGGCAAGCCTCCGATCCTAGTCTCCACCCTGCGGAT
AAGCTCGAGAGCAGACGAAC

Downstream 100 bases:

>100_bases
CCCAGATGATCAAGGACGACCGTCTCGAATTCGAAGCGCACAAGCGCGACATGTGCCTGGCGCTGGGGCGCGACGAGGCC
ACCTTCAACAAGATCACCAC

Product: perosamine synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPHATSALHLIFAALGIGPGDEV
IVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEAAIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAA
EALGSSLNGRRAGAFGRAAAFSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA
LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFDKFALMAEMERRNIDTRPFFS
PLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNMTEEKVDIVCAAFREVLAGGRTHRVAAE

Sequences:

>Translated_387_residues
MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPHATSALHLIFAALGIGPGDEV
IVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEAAIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAA
EALGSSLNGRRAGAFGRAAAFSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA
LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFDKFALMAEMERRNIDTRPFFS
PLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNMTEEKVDIVCAAFREVLAGGRTHRVAAE
>Mature_387_residues
MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPHATSALHLIFAALGIGPGDEV
IVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEAAIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAA
EALGSSLNGRRAGAFGRAAAFSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA
LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFDKFALMAEMERRNIDTRPFFS
PLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNMTEEKVDIVCAAFREVLAGGRTHRVAAE

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=388, Percent_Identity=31.701030927835, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI2367285, Length=271, Percent_Identity=31.3653136531365, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41988; Mature: 41988

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCEECCCC
ATSALHLIFAALGIGPGDEVIVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEA
HHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH
AIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAAEALGSSLNGRRAGAFGRAAA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCCCEE
FSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA
EEECCCCEEEECCCCEEEECCCCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEHHHHHHH
LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCC
KFALMAEMERRNIDTRPFFSPLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNM
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
TEEKVDIVCAAFREVLAGGRTHRVAAE
CHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCEECCCC
ATSALHLIFAALGIGPGDEVIVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEA
HHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH
AIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAAEALGSSLNGRRAGAFGRAAA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCCCEE
FSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA
EEECCCCEEEECCCCEEEECCCCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEHHHHHHH
LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCC
KFALMAEMERRNIDTRPFFSPLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNM
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
TEEKVDIVCAAFREVLAGGRTHRVAAE
CHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]