| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is epsN [H]
Identifier: 158425094
GI number: 158425094
Start: 3987836
End: 3988999
Strand: Direct
Name: epsN [H]
Synonym: AZC_3470
Alternate gene names: 158425094
Gene position: 3987836-3988999 (Clockwise)
Preceding gene: 158425093
Following gene: 158425095
Centisome position: 74.26
GC content: 66.15
Gene sequence:
>1164_bases ATGATCACTTCGGCGGAGCGCATTCCTGTGGCCGGTCCTTCCATCACGGACCGGGAGGCGGAGCTCGCCGCCGAAGCGGC ACGCACCGCCTGGTACGCCAATCATTACGCCTATAATGCGCGCTTCGAGAAGATGATGGCGGACTATGTGGGCGTCGGCC ATGCCGTCAGTGTCCCCCATGCCACGTCCGCCCTGCACCTGATCTTCGCGGCTCTCGGCATCGGCCCCGGCGACGAGGTC ATCGTGCCGGACGTGACCTGGATCGCCTCCGTCGCTCCCATCGTGCATCTCGGCGCGACGCCTATCCTCGTCGATATCCT CCCCGATACATGGTGCATCGATCCTGCGGCCGTGGAAGCCGCCATCGGCCCGTGCACCAAGGCGATCCTCGGCGTCGATC TCTACGGCTCCATGTGCGACTGGCCGACCCTTCAGGCCATCGCCGACCGCCACGGCCTGTATCTCGTGGAGGACGCTGCC GAGGCGCTCGGTTCCTCCCTCAACGGGCGCCGCGCCGGCGCCTTCGGACGTGCGGCCGCCTTCAGCTTCCACGGCTCGAA GACGGTGGCCACCGGCGAGGGGGGCATGTTCGTGACCGATGATCCCGAACTCAACGCCCGCGTGCTCTTCCTGCGCGACC ATGGCCGCAAGCCGGGGGACCGCTTCTTCCAGAACCACGAGATCGCGTTCAAGTACCGCATGAATGCGGTCACCGCCGCC CTCGGCATCGCCCAGATGGAGCGCATCGATGCGCTCATCGCGCACAAGCGCGCCATCTATGGCTGGTATCACGACCGCCT CGCCGACATGGACGGCCTGACGCTGAACTGCGAGCCCGAGGGCGTGTCCAATTCCTACTGGATGGTGACGGCCGTCCCCT GCGAGGCCTATGGCTTCGACAAATTCGCCCTGATGGCCGAGATGGAGCGCCGGAACATCGACACCCGGCCCTTCTTCTCG CCGCTCTCCAGCCTTCCCGCCTTCGACGCGCATCCCGAAGCCAAGCGCTTCGTGACGCCGAACGACTGCGGGCAGTTCAT CGCCCGGGTCGGCATCAACCTGCCGTCGGGCTACAACATGACCGAAGAAAAGGTCGACATCGTCTGTGCCGCCTTCCGCG AAGTGCTCGCCGGTGGCCGGACGCATCGCGTGGCAGCGGAATGA
Upstream 100 bases:
>100_bases GATTGCCGAAGTATTCGCGGGCAAAGGCCAGGAAGGCAGGCTTGGGGCAAGCCTCCGATCCTAGTCTCCACCCTGCGGAT AAGCTCGAGAGCAGACGAAC
Downstream 100 bases:
>100_bases CCCAGATGATCAAGGACGACCGTCTCGAATTCGAAGCGCACAAGCGCGACATGTGCCTGGCGCTGGGGCGCGACGAGGCC ACCTTCAACAAGATCACCAC
Product: perosamine synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPHATSALHLIFAALGIGPGDEV IVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEAAIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAA EALGSSLNGRRAGAFGRAAAFSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFDKFALMAEMERRNIDTRPFFS PLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNMTEEKVDIVCAAFREVLAGGRTHRVAAE
Sequences:
>Translated_387_residues MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPHATSALHLIFAALGIGPGDEV IVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEAAIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAA EALGSSLNGRRAGAFGRAAAFSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFDKFALMAEMERRNIDTRPFFS PLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNMTEEKVDIVCAAFREVLAGGRTHRVAAE >Mature_387_residues MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPHATSALHLIFAALGIGPGDEV IVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEAAIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAA EALGSSLNGRRAGAFGRAAAFSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFDKFALMAEMERRNIDTRPFFS PLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNMTEEKVDIVCAAFREVLAGGRTHRVAAE
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=388, Percent_Identity=31.701030927835, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI2367285, Length=271, Percent_Identity=31.3653136531365, Blast_Score=135, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR002129 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 41988; Mature: 41988
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCEECCCC ATSALHLIFAALGIGPGDEVIVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEA HHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH AIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAAEALGSSLNGRRAGAFGRAAA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCCCEE FSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA EEECCCCEEEECCCCEEEECCCCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEHHHHHHH LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCC KFALMAEMERRNIDTRPFFSPLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNM HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC TEEKVDIVCAAFREVLAGGRTHRVAAE CHHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure MITSAERIPVAGPSITDREAELAAEAARTAWYANHYAYNARFEKMMADYVGVGHAVSVPH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCEECCCC ATSALHLIFAALGIGPGDEVIVPDVTWIASVAPIVHLGATPILVDILPDTWCIDPAAVEA HHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH AIGPCTKAILGVDLYGSMCDWPTLQAIADRHGLYLVEDAAEALGSSLNGRRAGAFGRAAA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCCCCCEE FSFHGSKTVATGEGGMFVTDDPELNARVLFLRDHGRKPGDRFFQNHEIAFKYRMNAVTAA EEECCCCEEEECCCCEEEECCCCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEHHHHHHH LGIAQMERIDALIAHKRAIYGWYHDRLADMDGLTLNCEPEGVSNSYWMVTAVPCEAYGFD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCC KFALMAEMERRNIDTRPFFSPLSSLPAFDAHPEAKRFVTPNDCGQFIARVGINLPSGYNM HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC TEEKVDIVCAAFREVLAGGRTHRVAAE CHHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]