| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158425088
Identifier: 158425088
GI number: 158425088
Start: 3979644
End: 3980651
Strand: Reverse
Name: 158425088
Synonym: AZC_3464
Alternate gene names: NA
Gene position: 3980651-3979644 (Counterclockwise)
Preceding gene: 158425089
Following gene: 158425087
Centisome position: 74.13
GC content: 70.63
Gene sequence:
>1008_bases ATGACGATGAGCGTTTTCAAGGGTCTGACACGGTTCGCGGCGGTTCTGGCGCTGGGCCTCGCCGTGACCCTGCCGATGGT GGATCACGCCGATGCGCGGCAGGGCGGGAGCATGGGCAGCCGCGGCTCGCGCACCTATCAGGCGCCCGCCGCGACCAACA CCGCCCCCTCCGCTTCACAGCCGATCCAGCGCTCGGCGACCCCCTATAACCAGAGCGCGCCGATGGCGACGCCCGCCCGC ACCGGCGGTCTGTTCGGCAACGGATTTGGCGGCGCGCTCATGCGCGGCCTGCTGATCGGCGGCCTCGTGGGCATGCTGTT CGGCGGCGGCCTCGGCGGCCTGTCGGGCTTCCTCGGCCTCTTGCTGCAGGTGGCCCTCATCGCCGGCGTGGTCATGCTGG CCCTGCGCTTCTTCGCCAACCGTCGTCAGCCGGCTCCGGCCGGCGCCGGCTACGGCATGGCGCGGGACAATGGCGCCAGC GCCTCGGGCCGTGGCCCGACCGGGCCGCTCGGCGGTCTGGGCGGCCTCGGCGCGGGTCTTGGCGGCCTGGGCGGCGGCCA GACTCAGCCCCAGCCTCAGCCCCAGGCGGCGCCGTCCGGCCCGAAGGACGAACTGGGTCTCAAGGGCGCCGATTTCGATG CCTTCGAGAAGCTCCTCTCGGACATCCAGGCGGCCTACAGCCGTGAGGATCGCAACAAGCTCGCCGAGCTCGTAACGCCG GAAATCCTCGGCTATTTCGAGGAGGAGCTGCGCGCGAATGCCGAGCGTGGCGTCCGCAACCAGGTGAACGACGTGAAGCT CCTCCAGGGCGACTTGTCGGAAGCCTGGCGCGAAGGCCAGTTCGAATATGCCACCGTCGCGCTCCGCTATGAGGCGCGAG ACACCATGCGCGACCGCACCACCGGTGCGCTGGCCGCCGGTTCCACCGATGCGCCCAGCCAGAGCACCGAGGTGTGGACC TTCATCCGCTTGCGCGGCCAGCCCTGGAAGCTCTCCGCGATCCAGTGA
Upstream 100 bases:
>100_bases AAAAAGCGTCTCAACCCCCTGACAAACGCAGCTCGGTCTTCTTATATGAGCCTCACTTGCCCTAGCGGCAGGCTTGCGCG CGTCGGGCGCGCCATAGAGG
Downstream 100 bases:
>100_bases GGCGCATCCGCCCATCCGAACGGCCGTCCGCCCCGCGCGGGCGGCCGTTTTCGTCTGCCGCGCCTTTTCCAGCCTTCATG CCCGATGCTAGCCTGATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44-Like Domain Family
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTMSVFKGLTRFAAVLALGLAVTLPMVDHADARQGGSMGSRGSRTYQAPAATNTAPSASQPIQRSATPYNQSAPMATPAR TGGLFGNGFGGALMRGLLIGGLVGMLFGGGLGGLSGFLGLLLQVALIAGVVMLALRFFANRRQPAPAGAGYGMARDNGAS ASGRGPTGPLGGLGGLGAGLGGLGGGQTQPQPQPQAAPSGPKDELGLKGADFDAFEKLLSDIQAAYSREDRNKLAELVTP EILGYFEEELRANAERGVRNQVNDVKLLQGDLSEAWREGQFEYATVALRYEARDTMRDRTTGALAAGSTDAPSQSTEVWT FIRLRGQPWKLSAIQ
Sequences:
>Translated_335_residues MTMSVFKGLTRFAAVLALGLAVTLPMVDHADARQGGSMGSRGSRTYQAPAATNTAPSASQPIQRSATPYNQSAPMATPAR TGGLFGNGFGGALMRGLLIGGLVGMLFGGGLGGLSGFLGLLLQVALIAGVVMLALRFFANRRQPAPAGAGYGMARDNGAS ASGRGPTGPLGGLGGLGAGLGGLGGGQTQPQPQPQAAPSGPKDELGLKGADFDAFEKLLSDIQAAYSREDRNKLAELVTP EILGYFEEELRANAERGVRNQVNDVKLLQGDLSEAWREGQFEYATVALRYEARDTMRDRTTGALAAGSTDAPSQSTEVWT FIRLRGQPWKLSAIQ >Mature_334_residues TMSVFKGLTRFAAVLALGLAVTLPMVDHADARQGGSMGSRGSRTYQAPAATNTAPSASQPIQRSATPYNQSAPMATPART GGLFGNGFGGALMRGLLIGGLVGMLFGGGLGGLSGFLGLLLQVALIAGVVMLALRFFANRRQPAPAGAGYGMARDNGASA SGRGPTGPLGGLGGLGAGLGGLGGGQTQPQPQPQAAPSGPKDELGLKGADFDAFEKLLSDIQAAYSREDRNKLAELVTPE ILGYFEEELRANAERGVRNQVNDVKLLQGDLSEAWREGQFEYATVALRYEARDTMRDRTTGALAAGSTDAPSQSTEVWTF IRLRGQPWKLSAIQ
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34785; Mature: 34654
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSVFKGLTRFAAVLALGLAVTLPMVDHADARQGGSMGSRGSRTYQAPAATNTAPSASQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEECCCCCCCCCCCCC PIQRSATPYNQSAPMATPARTGGLFGNGFGGALMRGLLIGGLVGMLFGGGLGGLSGFLGL CHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLQVALIAGVVMLALRFFANRRQPAPAGAGYGMARDNGASASGRGPTGPLGGLGGLGAGL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC GGLGGGQTQPQPQPQAAPSGPKDELGLKGADFDAFEKLLSDIQAAYSREDRNKLAELVTP CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EILGYFEEELRANAERGVRNQVNDVKLLQGDLSEAWREGQFEYATVALRYEARDTMRDRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHH TGALAAGSTDAPSQSTEVWTFIRLRGQPWKLSAIQ CCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure TMSVFKGLTRFAAVLALGLAVTLPMVDHADARQGGSMGSRGSRTYQAPAATNTAPSASQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEECCCCCCCCCCCCC PIQRSATPYNQSAPMATPARTGGLFGNGFGGALMRGLLIGGLVGMLFGGGLGGLSGFLGL CHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLQVALIAGVVMLALRFFANRRQPAPAGAGYGMARDNGASASGRGPTGPLGGLGGLGAGL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC GGLGGGQTQPQPQPQAAPSGPKDELGLKGADFDAFEKLLSDIQAAYSREDRNKLAELVTP CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EILGYFEEELRANAERGVRNQVNDVKLLQGDLSEAWREGQFEYATVALRYEARDTMRDRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHH TGALAAGSTDAPSQSTEVWTFIRLRGQPWKLSAIQ CCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA