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The map label for this gene is spsC [H]

Identifier: 158425047

GI number: 158425047

Start: 3945994

End: 3947199

Strand: Direct

Name: spsC [H]

Synonym: AZC_3423

Alternate gene names: 158425047

Gene position: 3945994-3947199 (Clockwise)

Preceding gene: 158425046

Following gene: 158425048

Centisome position: 73.49

GC content: 66.09

Gene sequence:

>1206_bases
ATGATTGAGTCCGCACTCATCGATGGCGATACCCGCGCGGAAACCGACGAAGCCGAACTCGATGTCGGCTTCATTCCCCT
GTCCGACCCCGATATCACCGGCGCGGAACTGGCGGCGGTCGATGGCGTGCTCCGCAGCCCGCGCCTGTCGGGGGGGGCCG
TCGTCGGGGCCTTCGAGACCGCGTTTGCGGCCTATCTGGGCCGGCGCTATGCGGTGGCGGTGCCGAGCGGCACCTTCGCT
CTCATGCTCGTTCTCAAAGCCTATGGCATCGGCCCGGGCGACGAGGTGATCGCCTCGCCCTATTCCTTCCGCGAAACGGC
CCATGCCATCAGCCTCGTGGGCGCACGACCGGTCTTTGCCGACGTGGATTACTGGTCGGGAACCCTCGTTCCCGAGAAGG
CAGAGGCGCGTATCACCCCGGCCACAAAGGCCATTCTCGCGGCCAACACCAACGGCCATCCGGCCGCGTGGGACGGCCTG
CGCGCCGTGGCGGAGCGGCACGGCCTGAAGCTGCTGGAGGATTCCACCGAAGCCATCGGCTCGCGCTACAAGGGCGCGCT
CGTCGGCACCTTCGGTGATGCGTCGGTCTTCGACTTCTCCCAACCCTTCCCCATCACCTGCGGCGAGGGCGGGATCATCG
TCACCGACGATGTGGACGTGGCGGTGGCCGCCCGGCGCCATCGCGCGCACCGGCTGGACGAGCGCTCGTCCGTGGTGGTG
AGCGGCACCCCGCCCTTCCAGGCCACGATGAGCGAGATTTCCGCCGCGCTGGCCCTGACCCAGCTTCAGCGGCTGGACGA
GATCCTGGAACGGCGGCGCAGCACCGAACACCTCTACTACAAGCACATCAAGTCCTTCGAGGGGATCAAGGATCCCTACA
TGGCGCCCGATGTGACCGAGGTGAACTGGTTCCTCTACCTCGTGCACCTCGGCAACCGCTTCTCGCGCTCCAGCCGCGAC
TCCATCGTGGAGGACCTGAAGGTCGAGCAGGTGGAGGCCGCCGGCTATTGCCACCCGCTGCACCTGCAGCGGCACTATTT
CGACCTGGGATACCGGCGTGGCGACTATCTGGTCTCGGAGAAGCTCGCGGACCGAGCCGTCGCCCTCCCTTTCCACGCCC
ATCTGAGTGAGGACCAGATCCAGTTCATCGTCGAGACGATGAAGGACGCCTCCATCAATGTGGGCGCGGGAGCAGCCATT
TATTGA

Upstream 100 bases:

>100_bases
ATGAGGTCCATCTGCTGGACACCGCCGACCACTGCGTCCAGCTCACCTCCGATCCCGCCCGCGCCACCGGCGTCGTGCTC
GCCAAGCGCAAGGTGAAGCC

Downstream 100 bases:

>100_bases
CGCCCGCCGGCGCTGCCGGCGGAACGTCCATCGGGAGCCGGAGCCAAGGGATCGCGATCCCGGCCACCCTCCGTCTCGTA
ACTGATCATTCAATCATCTG

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MIESALIDGDTRAETDEAELDVGFIPLSDPDITGAELAAVDGVLRSPRLSGGAVVGAFETAFAAYLGRRYAVAVPSGTFA
LMLVLKAYGIGPGDEVIASPYSFRETAHAISLVGARPVFADVDYWSGTLVPEKAEARITPATKAILAANTNGHPAAWDGL
RAVAERHGLKLLEDSTEAIGSRYKGALVGTFGDASVFDFSQPFPITCGEGGIIVTDDVDVAVAARRHRAHRLDERSSVVV
SGTPPFQATMSEISAALALTQLQRLDEILERRRSTEHLYYKHIKSFEGIKDPYMAPDVTEVNWFLYLVHLGNRFSRSSRD
SIVEDLKVEQVEAAGYCHPLHLQRHYFDLGYRRGDYLVSEKLADRAVALPFHAHLSEDQIQFIVETMKDASINVGAGAAI
Y

Sequences:

>Translated_401_residues
MIESALIDGDTRAETDEAELDVGFIPLSDPDITGAELAAVDGVLRSPRLSGGAVVGAFETAFAAYLGRRYAVAVPSGTFA
LMLVLKAYGIGPGDEVIASPYSFRETAHAISLVGARPVFADVDYWSGTLVPEKAEARITPATKAILAANTNGHPAAWDGL
RAVAERHGLKLLEDSTEAIGSRYKGALVGTFGDASVFDFSQPFPITCGEGGIIVTDDVDVAVAARRHRAHRLDERSSVVV
SGTPPFQATMSEISAALALTQLQRLDEILERRRSTEHLYYKHIKSFEGIKDPYMAPDVTEVNWFLYLVHLGNRFSRSSRD
SIVEDLKVEQVEAAGYCHPLHLQRHYFDLGYRRGDYLVSEKLADRAVALPFHAHLSEDQIQFIVETMKDASINVGAGAAI
Y
>Mature_401_residues
MIESALIDGDTRAETDEAELDVGFIPLSDPDITGAELAAVDGVLRSPRLSGGAVVGAFETAFAAYLGRRYAVAVPSGTFA
LMLVLKAYGIGPGDEVIASPYSFRETAHAISLVGARPVFADVDYWSGTLVPEKAEARITPATKAILAANTNGHPAAWDGL
RAVAERHGLKLLEDSTEAIGSRYKGALVGTFGDASVFDFSQPFPITCGEGGIIVTDDVDVAVAARRHRAHRLDERSSVVV
SGTPPFQATMSEISAALALTQLQRLDEILERRRSTEHLYYKHIKSFEGIKDPYMAPDVTEVNWFLYLVHLGNRFSRSSRD
SIVEDLKVEQVEAAGYCHPLHLQRHYFDLGYRRGDYLVSEKLADRAVALPFHAHLSEDQIQFIVETMKDASINVGAGAAI
Y

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=333, Percent_Identity=35.4354354354354, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI2367285, Length=379, Percent_Identity=27.4406332453826, Blast_Score=108, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43581; Mature: 43581

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESALIDGDTRAETDEAELDVGFIPLSDPDITGAELAAVDGVLRSPRLSGGAVVGAFET
CCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEHHHHH
AFAAYLGRRYAVAVPSGTFALMLVLKAYGIGPGDEVIASPYSFRETAHAISLVGARPVFA
HHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEE
DVDYWSGTLVPEKAEARITPATKAILAANTNGHPAAWDGLRAVAERHGLKLLEDSTEAIG
ECCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHH
SRYKGALVGTFGDASVFDFSQPFPITCGEGGIIVTDDVDVAVAARRHRAHRLDERSSVVV
HHCCCEEEECCCCCCEECCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEE
SGTPPFQATMSEISAALALTQLQRLDEILERRRSTEHLYYKHIKSFEGIKDPYMAPDVTE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCH
VNWFLYLVHLGNRFSRSSRDSIVEDLKVEQVEAAGYCHPLHLQRHYFDLGYRRGDYLVSE
HHHEEEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
KLADRAVALPFHAHLSEDQIQFIVETMKDASINVGAGAAIY
HHHCCEEECCHHHCCCHHHHHHHHHHHHCCCEECCCCCCCC
>Mature Secondary Structure
MIESALIDGDTRAETDEAELDVGFIPLSDPDITGAELAAVDGVLRSPRLSGGAVVGAFET
CCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEHHHHH
AFAAYLGRRYAVAVPSGTFALMLVLKAYGIGPGDEVIASPYSFRETAHAISLVGARPVFA
HHHHHHCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEE
DVDYWSGTLVPEKAEARITPATKAILAANTNGHPAAWDGLRAVAERHGLKLLEDSTEAIG
ECCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHH
SRYKGALVGTFGDASVFDFSQPFPITCGEGGIIVTDDVDVAVAARRHRAHRLDERSSVVV
HHCCCEEEECCCCCCEECCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEE
SGTPPFQATMSEISAALALTQLQRLDEILERRRSTEHLYYKHIKSFEGIKDPYMAPDVTE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCH
VNWFLYLVHLGNRFSRSSRDSIVEDLKVEQVEAAGYCHPLHLQRHYFDLGYRRGDYLVSE
HHHEEEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHH
KLADRAVALPFHAHLSEDQIQFIVETMKDASINVGAGAAIY
HHHCCEEECCHHHCCCHHHHHHHHHHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]