| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is msbA [C]
Identifier: 158424935
GI number: 158424935
Start: 3833235
End: 3833480
Strand: Reverse
Name: msbA [C]
Synonym: AZC_3311
Alternate gene names: 158424935
Gene position: 3833480-3833235 (Counterclockwise)
Preceding gene: 158424936
Following gene: 158424933
Centisome position: 71.39
GC content: 73.58
Gene sequence:
>246_bases GTGCCCGTGCCCGTCTCCATAGCGGGAGGTGGGGCTTCGAGGCTGAAGCACTCGGGCGGCGCGCGCCAGCGCGTCGTCAT CGCCCACCGGCTCTCCACCGTGCGCACGCTCGACCGGCTTCTGGTCTTCGATCACGGCCGCATCGCCGAGCAGGGCCGCC CGGCGGACCTGCTGCGCCTCGACGGCGGCCTCTACCGCCGCCTCCACGAGCGCCAGACGCTGGATCTGGGTCTGGCGGCG GAGTGA
Upstream 100 bases:
>100_bases ACATGGCCCCGCGGGGGCCGATCTCCGCGCGCTCGACCTTCGGCGCCGCTGGAGCCTTCCGCCGGATGTTCTTCCCGCGG AAGGCGAGGGGGCGGCGCGG
Downstream 100 bases:
>100_bases GCGGCCGTCCCAGAGGCCGTTTGGAACTCTCCGAGCGGCCTCTGCCCCTGCCGTAAGGCGGGGGGGTATCGCATAGATAT TTGACCGTCCGTCTTCGATC
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MPVPVSIAGGGASRLKHSGGARQRVVIAHRLSTVRTLDRLLVFDHGRIAEQGRPADLLRLDGGLYRRLHERQTLDLGLAA E
Sequences:
>Translated_81_residues MPVPVSIAGGGASRLKHSGGARQRVVIAHRLSTVRTLDRLLVFDHGRIAEQGRPADLLRLDGGLYRRLHERQTLDLGLAA E >Mature_80_residues PVPVSIAGGGASRLKHSGGARQRVVIAHRLSTVRTLDRLLVFDHGRIAEQGRPADLLRLDGGLYRRLHERQTLDLGLAAE
Specific function: Involved In Lipid A Export And Possibly Also In Glycerophospholipid Export And For Biogenesis Of The Outer Membrane. Transmembrane Domains (Tmd) Form A Pore In The Inner Membrane And The ATP-Binding Domain (Nbd) Is Responsible For Energy Generation. [C]
COG id: COG1132
COG function: function code V; ABC-type multidrug transport system, ATPase and permease components
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8845; Mature: 8714
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPVSIAGGGASRLKHSGGARQRVVIAHRLSTVRTLDRLLVFDHGRIAEQGRPADLLRL CCCCEEEECCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE DGGLYRRLHERQTLDLGLAAE CCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PVPVSIAGGGASRLKHSGGARQRVVIAHRLSTVRTLDRLLVFDHGRIAEQGRPADLLRL CCCEEEECCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE DGGLYRRLHERQTLDLGLAAE CCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA