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The map label for this gene is dctM [C]

Identifier: 158424925

GI number: 158424925

Start: 3813072

End: 3814424

Strand: Direct

Name: dctM [C]

Synonym: AZC_3301

Alternate gene names: 158424925

Gene position: 3813072-3814424 (Clockwise)

Preceding gene: 158424924

Following gene: 158424931

Centisome position: 71.01

GC content: 65.71

Gene sequence:

>1353_bases
ATGAGCACGCTCGTCGTCGGCCTCATGTATGGCGGGGCGACCCTCGCCACCATGTTCATCGGCATGCCCATCGCCTTTGC
CCTCGGCGCGGTGGCGGTGCTTTTCATGTTCGGCTTCATGCCCTCCGCCTCCCTCGATACGGTGACGCAAAATGTCTACG
AGGAGATGGCCTCCATCACCCTCCTCTCCATTCCGCTGTTCATCCTGAAAGGCGCGGCCATCGGCAAGTCGCGCGCCGGA
CAGGACCTCTATTCGGCCCTGCACGCCTGGATGCACAAGGTGCCCGGCGGGCTCGGGATCGCCAATGTGTTTGCCTGCGC
GCTGTTCGCGGCCATGGCCGGCTCCTCGCCCGCCACCTGCTCGGCCATCGGCTCGGCGGGCATTCCGGAGATGCGCAAGC
GCGGCTATTCGGGCGCCTTCGCCGCCGGCATCATTGCGGCAGGCGGCACGCTCGGCATCCTGCTTCCGCCCTCCATCACC
ATGATCCTCTATGCGGTGGCGGCCGAGCAGTCGCTGGGGCGGCTGTTCCTCGCCGGCCTCGGCCCGGGCCTGCTGCTGGT
GGTGCTGTTCGCCGGCTACGCCATGATCCGTTTCCGGCAGGAATATGCCGCCGCCAAGATCGCGTATGAGCGCACGGGCG
CGCATTCGGAGATCCTCGCCGAGGACAAGCTCACCATGCGCGACCGCTTCGCGGCCCTGCCCCGCGTGCTGCCGTTCGTG
ATCCTGCTCACCGGCGTCATGGTCGCGCTCTATGGGGGCTATGCCACCCCCTCCGAGACGGCCGGCCTCGGCGGCATTCT
GGCGCTCGGGCTGATCGCAGCCATCTATGGCGTGTGGAAGCCGGCGGACCTTGCGCCCATCCTCACCTCCACCATCCGCG
AATCCACCATGCTGATGCTCATCATCGGCATGTCCCTGCTCTACTCCTATGTGATGAGCTATCTGCACATCAGCCAGGCG
GCCGCGCAGGCCATCGTGGGATTGCAGCTCTCCAAATGGCTGCTGCTCGCCACCATCCTGCTGCTGGTGGTGGTGCTCGG
CTTCTTCCTGCCGCCGGTCTCCATCATCCTCATGACGGCGCCCATCATTCTGCCGCCGCTGCGCGTGGCCGGGTTCGACC
TCATCTGGTTCGGCGTGGTGATGACCATCGTGATGGAGATGGGGCTCATCCACCCACCGGTGGGGCTCAACATCTTCGTC
ATCAAGAACATCGCACCCGACATCCCGCTCAAGGATGTCATCTGGGGCACGGTGCCCTTCGTGCTCTTGATGCTGCTGGC
CGTGGTGCTGCTGTGCCTGTTCCCGCAGATCGCCACCGGCCTGCCGGACATGGTGATGGGCAAGGGCCGCTGA

Upstream 100 bases:

>100_bases
CCATGTGGATCCCCTACTCGGTCATGACGCTGGGCATGGGCCTGCTGTCGGTGCAGATCGCGCTGCAGTTCATCTGCGCG
CTGGCGGGAGGACGCCGCTC

Downstream 100 bases:

>100_bases
GGCGGACAAAGGATCGGACAGCGGGGCGCTTCGGCGCCCCGTTCATGTCAGGAGGCCGGCGCGTCCGCCTGCGGGCGCTC
GACGGGGATCACGTCCACGC

Product: C4-dicarboxylate transport precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MSTLVVGLMYGGATLATMFIGMPIAFALGAVAVLFMFGFMPSASLDTVTQNVYEEMASITLLSIPLFILKGAAIGKSRAG
QDLYSALHAWMHKVPGGLGIANVFACALFAAMAGSSPATCSAIGSAGIPEMRKRGYSGAFAAGIIAAGGTLGILLPPSIT
MILYAVAAEQSLGRLFLAGLGPGLLLVVLFAGYAMIRFRQEYAAAKIAYERTGAHSEILAEDKLTMRDRFAALPRVLPFV
ILLTGVMVALYGGYATPSETAGLGGILALGLIAAIYGVWKPADLAPILTSTIRESTMLMLIIGMSLLYSYVMSYLHISQA
AAQAIVGLQLSKWLLLATILLLVVVLGFFLPPVSIILMTAPIILPPLRVAGFDLIWFGVVMTIVMEMGLIHPPVGLNIFV
IKNIAPDIPLKDVIWGTVPFVLLMLLAVVLLCLFPQIATGLPDMVMGKGR

Sequences:

>Translated_450_residues
MSTLVVGLMYGGATLATMFIGMPIAFALGAVAVLFMFGFMPSASLDTVTQNVYEEMASITLLSIPLFILKGAAIGKSRAG
QDLYSALHAWMHKVPGGLGIANVFACALFAAMAGSSPATCSAIGSAGIPEMRKRGYSGAFAAGIIAAGGTLGILLPPSIT
MILYAVAAEQSLGRLFLAGLGPGLLLVVLFAGYAMIRFRQEYAAAKIAYERTGAHSEILAEDKLTMRDRFAALPRVLPFV
ILLTGVMVALYGGYATPSETAGLGGILALGLIAAIYGVWKPADLAPILTSTIRESTMLMLIIGMSLLYSYVMSYLHISQA
AAQAIVGLQLSKWLLLATILLLVVVLGFFLPPVSIILMTAPIILPPLRVAGFDLIWFGVVMTIVMEMGLIHPPVGLNIFV
IKNIAPDIPLKDVIWGTVPFVLLMLLAVVLLCLFPQIATGLPDMVMGKGR
>Mature_449_residues
STLVVGLMYGGATLATMFIGMPIAFALGAVAVLFMFGFMPSASLDTVTQNVYEEMASITLLSIPLFILKGAAIGKSRAGQ
DLYSALHAWMHKVPGGLGIANVFACALFAAMAGSSPATCSAIGSAGIPEMRKRGYSGAFAAGIIAAGGTLGILLPPSITM
ILYAVAAEQSLGRLFLAGLGPGLLLVVLFAGYAMIRFRQEYAAAKIAYERTGAHSEILAEDKLTMRDRFAALPRVLPFVI
LLTGVMVALYGGYATPSETAGLGGILALGLIAAIYGVWKPADLAPILTSTIRESTMLMLIIGMSLLYSYVMSYLHISQAA
AQAIVGLQLSKWLLLATILLLVVVLGFFLPPVSIILMTAPIILPPLRVAGFDLIWFGVVMTIVMEMGLIHPPVGLNIFVI
KNIAPDIPLKDVIWGTVPFVLLMLLAVVLLCLFPQIATGLPDMVMGKGR

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=415, Percent_Identity=27.2289156626506, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 47453; Mature: 47322

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLVVGLMYGGATLATMFIGMPIAFALGAVAVLFMFGFMPSASLDTVTQNVYEEMASIT
CCCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLSIPLFILKGAAIGKSRAGQDLYSALHAWMHKVPGGLGIANVFACALFAAMAGSSPATC
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH
SAIGSAGIPEMRKRGYSGAFAAGIIAAGGTLGILLPPSITMILYAVAAEQSLGRLFLAGL
HHHCCCCCCHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
GPGLLLVVLFAGYAMIRFRQEYAAAKIAYERTGAHSEILAEDKLTMRDRFAALPRVLPFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLTGVMVALYGGYATPSETAGLGGILALGLIAAIYGVWKPADLAPILTSTIRESTMLML
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IIGMSLLYSYVMSYLHISQAAAQAIVGLQLSKWLLLATILLLVVVLGFFLPPVSIILMTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIILPPLRVAGFDLIWFGVVMTIVMEMGLIHPPVGLNIFVIKNIAPDIPLKDVIWGTVPF
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
VLLMLLAVVLLCLFPQIATGLPDMVMGKGR
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
>Mature Secondary Structure 
STLVVGLMYGGATLATMFIGMPIAFALGAVAVLFMFGFMPSASLDTVTQNVYEEMASIT
CCEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LLSIPLFILKGAAIGKSRAGQDLYSALHAWMHKVPGGLGIANVFACALFAAMAGSSPATC
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH
SAIGSAGIPEMRKRGYSGAFAAGIIAAGGTLGILLPPSITMILYAVAAEQSLGRLFLAGL
HHHCCCCCCHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHC
GPGLLLVVLFAGYAMIRFRQEYAAAKIAYERTGAHSEILAEDKLTMRDRFAALPRVLPFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLTGVMVALYGGYATPSETAGLGGILALGLIAAIYGVWKPADLAPILTSTIRESTMLML
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IIGMSLLYSYVMSYLHISQAAAQAIVGLQLSKWLLLATILLLVVVLGFFLPPVSIILMTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIILPPLRVAGFDLIWFGVVMTIVMEMGLIHPPVGLNIFVIKNIAPDIPLKDVIWGTVPF
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
VLLMLLAVVLLCLFPQIATGLPDMVMGKGR
HHHHHHHHHHHHHHHHHHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]