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The map label for this gene is fliY [H]

Identifier: 158424904

GI number: 158424904

Start: 3787568

End: 3788371

Strand: Reverse

Name: fliY [H]

Synonym: AZC_3280

Alternate gene names: 158424904

Gene position: 3788371-3787568 (Counterclockwise)

Preceding gene: 158424905

Following gene: 158424903

Centisome position: 70.55

GC content: 65.17

Gene sequence:

>804_bases
ATGGAGCGCCTGAACATCGGCCGTCGCGCCTTTCTCGCCGGGGCCGCCGGCCTTGCGGCCATGGGCAGCTTTGCCCTGCC
GGCCCGCGCCGACACGCTCGACGAGATCAAGAAGCGCGGCAAGATCCTAATCGCGGTGGACCTCGGCTCCCCGCCCTTCG
GCATGAACGATGCCAACATGCAGCCCACCGGCTCGGATGTGGAGAGCGCCAAGCTCATCGCCGCCGATCTCGGCTTCCCG
CTGGAGATCGTGCAGGTCACGAGCCCCAACCGCATCCCCTTCCTGCTCACCGGCAAGGCGGATCTGGTGATGGCCTCGTT
CAGCGTTACCGACGAGCGCAAGAAGGTGATCGACTTCTCCGATCCCTACGGCGTGATCCAGATCGTCGTCGCCGCGCCCA
AGAGCGTTGCCGTCAAGGATCTGAAGGACCTCGTGGGCAAGCGCCTCGGCACCACCCGCGGCTCCAGCAACGACAAGGAA
GCCACCACCCAGGCGCAGGGCGCCGAGATGGTGCGCTATGACGACGACGCGACCCTCATCACCGCGCTGGTGTCCGGCCA
GGTGAACATCATGGCCTCCTCGCCGCAGGTGATGGCGGCGGTGAATGCGCGCCGTCCCAACGATCCGCTGGAAATCAAGC
TGGTGCTCAAGACCAACCCCTATGCGGCCGGTCTGCGCAAGGGCGACGATGCGCTGCGGGAGGCGGTCAACAAGGTGATC
GCCACCAACCTGAAGAACGGCAAGCTGAACGAGATCTACACCCGCTACAACGGGACCTCGCTGCCGGAAGACATGTTGAA
GTGA

Upstream 100 bases:

>100_bases
TCGGCAGCGGGCTGTGACCTGCTGGCCCAGCGCCTGCCATAACCAAAAACGCCGACGCCACTCTCAAACCGACGCCAAGC
ACACAAGAAGGGATGGAACC

Downstream 100 bases:

>100_bases
TTTGACGAGGCGGCCCGGTCTCCACCGGGCCGCCGCCCTGTTCCATTTCAGGAAAGACCTGGACGATGAAGGCGTTACTC
TGCGAAGAACCCGGCCGCCT

Product: extracellular substrate-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MERLNIGRRAFLAGAAGLAAMGSFALPARADTLDEIKKRGKILIAVDLGSPPFGMNDANMQPTGSDVESAKLIAADLGFP
LEIVQVTSPNRIPFLLTGKADLVMASFSVTDERKKVIDFSDPYGVIQIVVAAPKSVAVKDLKDLVGKRLGTTRGSSNDKE
ATTQAQGAEMVRYDDDATLITALVSGQVNIMASSPQVMAAVNARRPNDPLEIKLVLKTNPYAAGLRKGDDALREAVNKVI
ATNLKNGKLNEIYTRYNGTSLPEDMLK

Sequences:

>Translated_267_residues
MERLNIGRRAFLAGAAGLAAMGSFALPARADTLDEIKKRGKILIAVDLGSPPFGMNDANMQPTGSDVESAKLIAADLGFP
LEIVQVTSPNRIPFLLTGKADLVMASFSVTDERKKVIDFSDPYGVIQIVVAAPKSVAVKDLKDLVGKRLGTTRGSSNDKE
ATTQAQGAEMVRYDDDATLITALVSGQVNIMASSPQVMAAVNARRPNDPLEIKLVLKTNPYAAGLRKGDDALREAVNKVI
ATNLKNGKLNEIYTRYNGTSLPEDMLK
>Mature_267_residues
MERLNIGRRAFLAGAAGLAAMGSFALPARADTLDEIKKRGKILIAVDLGSPPFGMNDANMQPTGSDVESAKLIAADLGFP
LEIVQVTSPNRIPFLLTGKADLVMASFSVTDERKKVIDFSDPYGVIQIVVAAPKSVAVKDLKDLVGKRLGTTRGSSNDKE
ATTQAQGAEMVRYDDDATLITALVSGQVNIMASSPQVMAAVNARRPNDPLEIKLVLKTNPYAAGLRKGDDALREAVNKVI
ATNLKNGKLNEIYTRYNGTSLPEDMLK

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=264, Percent_Identity=28.7878787878788, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787031, Length=223, Percent_Identity=28.2511210762332, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787085, Length=220, Percent_Identity=25.9090909090909, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788648, Length=225, Percent_Identity=24.8888888888889, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28543; Mature: 28543

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLNIGRRAFLAGAAGLAAMGSFALPARADTLDEIKKRGKILIAVDLGSPPFGMNDANM
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCC
QPTGSDVESAKLIAADLGFPLEIVQVTSPNRIPFLLTGKADLVMASFSVTDERKKVIDFS
CCCCCCCHHHEEEEECCCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCHHHEECCC
DPYGVIQIVVAAPKSVAVKDLKDLVGKRLGTTRGSSNDKEATTQAQGAEMVRYDDDATLI
CCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEECCCHHEE
TALVSGQVNIMASSPQVMAAVNARRPNDPLEIKLVLKTNPYAAGLRKGDDALREAVNKVI
EHHHCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
ATNLKNGKLNEIYTRYNGTSLPEDMLK
HHCCCCCCHHHEEEECCCCCCCHHHHC
>Mature Secondary Structure
MERLNIGRRAFLAGAAGLAAMGSFALPARADTLDEIKKRGKILIAVDLGSPPFGMNDANM
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCC
QPTGSDVESAKLIAADLGFPLEIVQVTSPNRIPFLLTGKADLVMASFSVTDERKKVIDFS
CCCCCCCHHHEEEEECCCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCHHHEECCC
DPYGVIQIVVAAPKSVAVKDLKDLVGKRLGTTRGSSNDKEATTQAQGAEMVRYDDDATLI
CCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEECCCHHEE
TALVSGQVNIMASSPQVMAAVNARRPNDPLEIKLVLKTNPYAAGLRKGDDALREAVNKVI
EHHHCCCEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
ATNLKNGKLNEIYTRYNGTSLPEDMLK
HHCCCCCCHHHEEEECCCCCCCHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]