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The map label for this gene is feaR [H]

Identifier: 158424854

GI number: 158424854

Start: 3703820

End: 3704860

Strand: Direct

Name: feaR [H]

Synonym: AZC_3230

Alternate gene names: 158424854

Gene position: 3703820-3704860 (Clockwise)

Preceding gene: 158424850

Following gene: 158424859

Centisome position: 68.98

GC content: 64.94

Gene sequence:

>1041_bases
GTGGGTGGGAGAACGCGCATGTCAGGAGGCATTCCGTCCAGAAGGTTCCGGACGCTGGAGTCCGATAAGGCGGAACAGTT
CGGCCGCTACCACGACCATATGGCGCCCATCTACGACGTAGCGGCGGAGGAAAATGGCAAGGCCGGCTTTGCCGCCGATA
TGACCGCATATCATCTGGGCGGCATGCTGGTCGGCGCTTCAGGCTTTTCCGATCACGCGATCGGACGAAGCAAGCGCAAG
ATCGCCCGGACGGACATGGATCACCTGCTGGTGCAACTGCACAAAACCGGTGGGCTGGACGCCGACGCCGAGGGCAATGT
TGTGCGTGTGCGTGCGGGTGACATCTCCCTGATCGATCTCGGCCGACCGATGGACGGGCATGCCAAGACCTCGCAGACGC
TCGACGTCATCCTGCCGCGTTCCCAGCTTCCGGATCTGGCGCAACGGCGCAAGACGCCGCACGGTGCCGTGCTGAGCGGC
GACAGTCTGATGGGCGGCATTCTGGGGGACTTCCTGCTTTCCTTGGCACGGAGACTGGACGCCGCCACCCCACGCGACGC
CGGTCTCCTCACCCGTGCGGCCGCCGACCTGATCACAACGTGCTTCCAGTCGGAGACGGGCGTCGCCGCAGCACAGGAGG
GGCTGCTTCTTGCAGCCTCTGAACGGGCGAGACGCTACATCGATGCCAATCTGTCGAAGGCCGAGTTGGTGCCCGTCCGC
GTCGCGCGGGAGCTGCGCATGTCGCGCTCAAGTCTGTACCGTCTGTTCGAGGCTGAAGGCGGGATCGCGAAATATATCCG
GACGCGCCGGCTGACCACCGCCTTGTACTTGCTGACACATCCGGCGCATGCCGGCATGCGCATCGGCGAGATCGCCTTCC
GGTGCGGTTTCAGTAGCGAGGCCCATTTCAGCCGCGCATTCCGCAGCGAGTTCGACATGAAACCCAGCGAGGCCAGGAAG
CGCGCCCGCTTCGAACCTGCCCTGGCTGCTGCCTCCCCGGGCGAGGGGCCTTGGATCGCCTCGCTTCGCCCCTCGGAATA
G

Upstream 100 bases:

>100_bases
GTCGGAGGGTCAACAGGTTTCCGGAACCCGAAAGAGGGAAGAACATTCCCTTTGGGAAGAGAGCCTGAGATAATGCATTG
CACGCGATGATCGGAGCCAC

Downstream 100 bases:

>100_bases
AGGCTCCCAGGCAAGGCGTGAAACGGAGCTAGCGGACGCAGGATCTGAGCCGGGGCGCTCCTGCCAAGACCGCCAATCCG
CTTTGGCGCAGGTGGAAAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MGGRTRMSGGIPSRRFRTLESDKAEQFGRYHDHMAPIYDVAAEENGKAGFAADMTAYHLGGMLVGASGFSDHAIGRSKRK
IARTDMDHLLVQLHKTGGLDADAEGNVVRVRAGDISLIDLGRPMDGHAKTSQTLDVILPRSQLPDLAQRRKTPHGAVLSG
DSLMGGILGDFLLSLARRLDAATPRDAGLLTRAAADLITTCFQSETGVAAAQEGLLLAASERARRYIDANLSKAELVPVR
VARELRMSRSSLYRLFEAEGGIAKYIRTRRLTTALYLLTHPAHAGMRIGEIAFRCGFSSEAHFSRAFRSEFDMKPSEARK
RARFEPALAAASPGEGPWIASLRPSE

Sequences:

>Translated_346_residues
MGGRTRMSGGIPSRRFRTLESDKAEQFGRYHDHMAPIYDVAAEENGKAGFAADMTAYHLGGMLVGASGFSDHAIGRSKRK
IARTDMDHLLVQLHKTGGLDADAEGNVVRVRAGDISLIDLGRPMDGHAKTSQTLDVILPRSQLPDLAQRRKTPHGAVLSG
DSLMGGILGDFLLSLARRLDAATPRDAGLLTRAAADLITTCFQSETGVAAAQEGLLLAASERARRYIDANLSKAELVPVR
VARELRMSRSSLYRLFEAEGGIAKYIRTRRLTTALYLLTHPAHAGMRIGEIAFRCGFSSEAHFSRAFRSEFDMKPSEARK
RARFEPALAAASPGEGPWIASLRPSE
>Mature_345_residues
GGRTRMSGGIPSRRFRTLESDKAEQFGRYHDHMAPIYDVAAEENGKAGFAADMTAYHLGGMLVGASGFSDHAIGRSKRKI
ARTDMDHLLVQLHKTGGLDADAEGNVVRVRAGDISLIDLGRPMDGHAKTSQTLDVILPRSQLPDLAQRRKTPHGAVLSGD
SLMGGILGDFLLSLARRLDAATPRDAGLLTRAAADLITTCFQSETGVAAAQEGLLLAASERARRYIDANLSKAELVPVRV
ARELRMSRSSLYRLFEAEGGIAKYIRTRRLTTALYLLTHPAHAGMRIGEIAFRCGFSSEAHFSRAFRSEFDMKPSEARKR
ARFEPALAAASPGEGPWIASLRPSE

Specific function: Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787649, Length=262, Percent_Identity=27.0992366412214, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37583; Mature: 37452

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGRTRMSGGIPSRRFRTLESDKAEQFGRYHDHMAPIYDVAAEENGKAGFAADMTAYHLG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHC
GMLVGASGFSDHAIGRSKRKIARTDMDHLLVQLHKTGGLDADAEGNVVRVRAGDISLIDL
CEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEC
GRPMDGHAKTSQTLDVILPRSQLPDLAQRRKTPHGAVLSGDSLMGGILGDFLLSLARRLD
CCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHC
AATPRDAGLLTRAAADLITTCFQSETGVAAAQEGLLLAASERARRYIDANLSKAELVPVR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHCCCCCHHHHHHH
VARELRMSRSSLYRLFEAEGGIAKYIRTRRLTTALYLLTHPAHAGMRIGEIAFRCGFSSE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCCCCH
AHFSRAFRSEFDMKPSEARKRARFEPALAAASPGEGPWIASLRPSE
HHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
GGRTRMSGGIPSRRFRTLESDKAEQFGRYHDHMAPIYDVAAEENGKAGFAADMTAYHLG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHC
GMLVGASGFSDHAIGRSKRKIARTDMDHLLVQLHKTGGLDADAEGNVVRVRAGDISLIDL
CEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEC
GRPMDGHAKTSQTLDVILPRSQLPDLAQRRKTPHGAVLSGDSLMGGILGDFLLSLARRLD
CCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHC
AATPRDAGLLTRAAADLITTCFQSETGVAAAQEGLLLAASERARRYIDANLSKAELVPVR
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHCCCCCHHHHHHH
VARELRMSRSSLYRLFEAEGGIAKYIRTRRLTTALYLLTHPAHAGMRIGEIAFRCGFSSE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCCCCH
AHFSRAFRSEFDMKPSEARKRARFEPALAAASPGEGPWIASLRPSE
HHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631685; 9043126; 9278503; 9109378 [H]