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The map label for this gene is med [H]

Identifier: 158424823

GI number: 158424823

Start: 3657356

End: 3658501

Strand: Direct

Name: med [H]

Synonym: AZC_3199

Alternate gene names: 158424823

Gene position: 3657356-3658501 (Clockwise)

Preceding gene: 158424822

Following gene: 158424824

Centisome position: 68.11

GC content: 65.79

Gene sequence:

>1146_bases
ATGGAATGGGCTCGCCGGCCGGCGCGAGTTGCGCCCCATCTTGCAAGGATGCCCGCAGTCACCACCCTCCTGCCGCCGGC
GCGCTGCCGGGCAGGCCTGAGACTCGGGAGCACCCACATGTTCGATGCCCTCCGGCCGAACAAGGCCCGCCGCCTTGCCA
CCACCTTCTGCGCGGCGGCACTGGCGACGCTGGCATTCGGCGGCGCCGCGCTGGCCCAGAAGGCGGCCTTCCTGTTCCCC
GGCTCCATCAACGACCAGAGCTGGAACGCGCAGGGCTTTCTCGGTGCGGAGAAGCTGAAGTCGCTCGGCTGGCAGATCTC
CTATTCGGAGAATGTGGGCGCCGCCGACATGGTGGACGCGCTGCGCGACTATGCCCGGCAAGGCAACAACGTGGTGGTCG
GCCACACGGGCCGCTTCGTCTCGGCCGCCGAGCGCGTGGGGCCGGATTTCCCCAAGACCCTGTTCCTCGTCGGCTCCGGC
GCCAAGGGTGCGGCGCCGAACGTGACCTCCATCGACTATGACAACACCCAGTTCGGCTATCTCATGGGCGTGCTGGCGGC
GCGCATGAGCAAGACAGGCAAGATCGGCTCGGTAAACAGCCTCGAAGGCATTCCGAACGTGATGGCGCAGGTCGGCGCCT
TCCGTCTCGGCGCCAAGTCGGTGAAACCCGACATCGAGGTGAAGGTCATCTACATCAAGAGCATGGAGGATGGCGCCGAG
GCCAAGGAGGCCGCCCTCTCCCTCATCGCCGGCGGCGCCGACTTCATCAGCGGCAAGCTGAACGCGGGCCAGTCCGGCAT
CATCCAGGCGGCCAAGGAGAAGAATGTCTTCGCCAACGGCCGCTCCTACGGCCACACCGCCATTGCGCCCGACAATGTGC
TCACCAACATCGTCGAGAAGTGGGCCGACATGTACACGGCGGCCGCCGAATCCAGCAAGACGACGGACATGGGCGGCAAG
TACATCCTCTATGGCTTCAACACGCCGGGCTCCACCGGTGCCGAGCTGAGCTATGGCGAGGGACAGCCCTACAACAAGGC
GGTGCCCCAGGTCGTGGTGGACGAACTCGACGGGCTCAAGAAGAAGTTTGCCTCCGGTGAGCTGAAGATCACCGTCACCA
AGGAAGATGCCCGCGGCGGCATCTGA

Upstream 100 bases:

>100_bases
GCCTGGTCCGGCGCGCGCCTCTGACGGCGCCTGAACCGCCTTTCCAAAAAGACACCAACCCCTTGTTCTGAATCGAATTT
TCCGCTTTCCATCCCGCCAG

Downstream 100 bases:

>100_bases
CCGGGAGCCCCGTCCCGGCACCTCCCCCCACCGCCGGGATGGGGCTCTTCCTTCTGGGACAAGACGGATCGAGGCGGCGT
TCATGCTGGAGATGCGTGGC

Product: ABC transporter periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MEWARRPARVAPHLARMPAVTTLLPPARCRAGLRLGSTHMFDALRPNKARRLATTFCAAALATLAFGGAALAQKAAFLFP
GSINDQSWNAQGFLGAEKLKSLGWQISYSENVGAADMVDALRDYARQGNNVVVGHTGRFVSAAERVGPDFPKTLFLVGSG
AKGAAPNVTSIDYDNTQFGYLMGVLAARMSKTGKIGSVNSLEGIPNVMAQVGAFRLGAKSVKPDIEVKVIYIKSMEDGAE
AKEAALSLIAGGADFISGKLNAGQSGIIQAAKEKNVFANGRSYGHTAIAPDNVLTNIVEKWADMYTAAAESSKTTDMGGK
YILYGFNTPGSTGAELSYGEGQPYNKAVPQVVVDELDGLKKKFASGELKITVTKEDARGGI

Sequences:

>Translated_381_residues
MEWARRPARVAPHLARMPAVTTLLPPARCRAGLRLGSTHMFDALRPNKARRLATTFCAAALATLAFGGAALAQKAAFLFP
GSINDQSWNAQGFLGAEKLKSLGWQISYSENVGAADMVDALRDYARQGNNVVVGHTGRFVSAAERVGPDFPKTLFLVGSG
AKGAAPNVTSIDYDNTQFGYLMGVLAARMSKTGKIGSVNSLEGIPNVMAQVGAFRLGAKSVKPDIEVKVIYIKSMEDGAE
AKEAALSLIAGGADFISGKLNAGQSGIIQAAKEKNVFANGRSYGHTAIAPDNVLTNIVEKWADMYTAAAESSKTTDMGGK
YILYGFNTPGSTGAELSYGEGQPYNKAVPQVVVDELDGLKKKFASGELKITVTKEDARGGI
>Mature_381_residues
MEWARRPARVAPHLARMPAVTTLLPPARCRAGLRLGSTHMFDALRPNKARRLATTFCAAALATLAFGGAALAQKAAFLFP
GSINDQSWNAQGFLGAEKLKSLGWQISYSENVGAADMVDALRDYARQGNNVVVGHTGRFVSAAERVGPDFPKTLFLVGSG
AKGAAPNVTSIDYDNTQFGYLMGVLAARMSKTGKIGSVNSLEGIPNVMAQVGAFRLGAKSVKPDIEVKVIYIKSMEDGAE
AKEAALSLIAGGADFISGKLNAGQSGIIQAAKEKNVFANGRSYGHTAIAPDNVLTNIVEKWADMYTAAAESSKTTDMGGK
YILYGFNTPGSTGAELSYGEGQPYNKAVPQVVVDELDGLKKKFASGELKITVTKEDARGGI

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 40200; Mature: 40200

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWARRPARVAPHLARMPAVTTLLPPARCRAGLRLGSTHMFDALRPNKARRLATTFCAAA
CCCCCCCHHHHHHHHHCCHHHHCCCHHHHHCCCEECCHHHHHCCCCCHHHHHHHHHHHHH
LATLAFGGAALAQKAAFLFPGSINDQSWNAQGFLGAEKLKSLGWQISYSENVGAADMVDA
HHHHHHCCHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHH
LRDYARQGNNVVVGHTGRFVSAAERVGPDFPKTLFLVGSGAKGAAPNVTSIDYDNTQFGY
HHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH
LMGVLAARMSKTGKIGSVNSLEGIPNVMAQVGAFRLGAKSVKPDIEVKVIYIKSMEDGAE
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHH
AKEAALSLIAGGADFISGKLNAGQSGIIQAAKEKNVFANGRSYGHTAIAPDNVLTNIVEK
HHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHH
WADMYTAAAESSKTTDMGGKYILYGFNTPGSTGAELSYGEGQPYNKAVPQVVVDELDGLK
HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KKFASGELKITVTKEDARGGI
HHHCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MEWARRPARVAPHLARMPAVTTLLPPARCRAGLRLGSTHMFDALRPNKARRLATTFCAAA
CCCCCCCHHHHHHHHHCCHHHHCCCHHHHHCCCEECCHHHHHCCCCCHHHHHHHHHHHHH
LATLAFGGAALAQKAAFLFPGSINDQSWNAQGFLGAEKLKSLGWQISYSENVGAADMVDA
HHHHHHCCHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHH
LRDYARQGNNVVVGHTGRFVSAAERVGPDFPKTLFLVGSGAKGAAPNVTSIDYDNTQFGY
HHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH
LMGVLAARMSKTGKIGSVNSLEGIPNVMAQVGAFRLGAKSVKPDIEVKVIYIKSMEDGAE
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHH
AKEAALSLIAGGADFISGKLNAGQSGIIQAAKEKNVFANGRSYGHTAIAPDNVLTNIVEK
HHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHH
WADMYTAAAESSKTTDMGGKYILYGFNTPGSTGAELSYGEGQPYNKAVPQVVVDELDGLK
HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KKFASGELKITVTKEDARGGI
HHHCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]