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The map label for this gene is ygiQ [C]

Identifier: 158424805

GI number: 158424805

Start: 3637642

End: 3639675

Strand: Direct

Name: ygiQ [C]

Synonym: AZC_3181

Alternate gene names: 158424805

Gene position: 3637642-3639675 (Clockwise)

Preceding gene: 158424803

Following gene: 158424808

Centisome position: 67.74

GC content: 67.45

Gene sequence:

>2034_bases
ATGCAGACCCTCTCGACCGCCGAAAAAGCCTCGATTTCCGCGCCCTGCCTGCGGACCCGCACCGGCAGGGGCGCGCCGTT
CCTGCCCATGAGCCGCGCCGAGATGGACCGGCTCGGCTGGGATGCGTGCGATATCGTGCTGGTGACGGGCGACGCTTATG
TGGACCATCCGAGCTTCGGCATGGCCATCATCGGACGCCTGCTGGAGTCGCAGGGCTACCGCGTCGGTATCATCGCCCAG
CCGGACTGGCATTCAGCCGAACCGTTCAAGGCGCTCGGCAAGCCGCGCCTCTTCTTCGGCGTGACCGGCGGCAATCTGGA
CTCGATGGTCAACCGCTACACGTCGGACCGCCGCCTGCGCAGTGACGACGCCTATACGCCCGGCGGCGAGGGCGGCAAGC
GGCCGGACCGCTGCACCATCGTCTATACGCAGCGCTGCCGCGAAGCCTACAAGGACGTGCCGGTCATACTCGGCGGCATC
GAGGCATCGCTCCGCCGCATCGCCCATTACGACTATTGGTCCGACAAGGTGCGCCGCTCCATCCTCGCGGACGCCAAGGC
CGACCTGCTGATCTACGGCAATGCCGAGCGCGCCGTGATCGAGGTGGCGAACCGCATCGCCGCCGGCGAGGCGCCTCGCG
ACCTCACGTCCGTTCGCGGCGTGGCCTTGTTCCGCAAGGTGCCGGAGCACTTCACGGAACTGCACGCGGATGATCTCGAT
TCCGCCGACGAGGCCGCCACCCGCCACCCCGGCGATACGGTGATCCGCCTGCCCTCCTTCGAGCAGGTGGAGAATGACCG
CGAGGCCTATGCCCGCGCCTCCCGCGTGCTGCACCGGGAAGCCAATCCCGGCAATGCCCGCCCGCTGGTGCAGCGGCACG
GCGACCGCGACCTGTGGCTCAATCCGCCGCCCATTCCGCTCACCACGGAAGAGATGGATCAGGTCTATGACCTGCCCTAT
GCGCGGGCGCCGCATCCCGCCTATGGCGATGCGAAGATCCCCGCCTGGGACATGATCAAGTTCTCGGTGACGATCATGCG
CGGCTGCTTCGGCGGCTGCACCTTCTGCTCCATCACGGAGCATGAGGGGCGCGTCATCCAGAACCGCTCGGAAGGCTCCA
TCCTGCGCGAGATCGAGAAGATCCGCGACCAGACGCCCGGCTTCACCGGCGTCATCTCCGACATCGGCGGGCCCACCGCC
AACATGTACCGGATGGCCTGCAAGGACCCGAAGATCGAGGCCGCCTGCCGGCTGCCGTCCTGCGTCTTCCCGGACATCTG
CCCGAACCTCAACACCTCCCATGACGACCTGATCCGCCTCTATCGCAAGGTGCGCGAGGTGGAGGGCGTGAAGAAGGTGA
TGGTGGCGTCTGGCGTGCGCTACGACCTCGCGGTCAAGAGCCCGGAATATGTGAAGGAACTCGTCACCCACCATGTGGGC
GGCTACCTGAAGATCGCCCCCGAGCACACCGAGCGCGGCCCGCTCGACAAGATGATGAAGCCGGGCATCGGCACCTATGA
CCGCTTCAAGGAGATGTTCGAGGCGGCGGCCAAGGAGGTGGGGAAGAAATACTATCTGATCCCCTATTTCATCGCCGCGC
ATCCGGGCACGACCGACGAGGACATGATGCACCTCGCGCTCTGGCTCAAGAAGAACCGCTACCGCGCCGATCAGGTGCAG
ACCTTCCTGCCCTCGCCCATGGCGACCGCAACCGCCATGTACCACACCGGCGTCAACACGCTGCGGGGCGTACGGCGCGG
GGCCACGGAGCAGGTCGAAACCATCAAGGGCGGGCGGCAGCGCCGGCTGCACAAGGCGTTCCTGCGCTACCACGACCCGG
ACAACTGGCCGCTCCTGCGCGAGGCGCTGAAAGAGATGGGCCGCGCCGACCTCATCGGCTCGCGCCCGGATCAGCTCGTG
CCCGCCTATCAGCCGCCGGGCACCGGCAAGGCCGCCGGCACCAAGCGCCCCGTGCGCCCCGGCAGCGGCACGCAGCGCTT
CACCACCAAGGGCGTGACCCTGCCCCGCCGCTAG

Upstream 100 bases:

>100_bases
GCACTGGCTTCGGCGGCCTCTTTGCCCAGCGTCACGCGCGGACGCGGGCCGCAACACCGTGAGTTGAAATCAGGCCCCTG
CGGTCTTATGCGTCATTGCC

Downstream 100 bases:

>100_bases
GCCGGCGCCCGATCAGGCGGCCGGCGGCAGCGGCGCGCGCTGGAGGACGGCGGCGAAGAAGCCGTCCATATCGTGCCGCG
CGGGCGTGAGCGAGAGATAG

Product: elongator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MQTLSTAEKASISAPCLRTRTGRGAPFLPMSRAEMDRLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLESQGYRVGIIAQ
PDWHSAEPFKALGKPRLFFGVTGGNLDSMVNRYTSDRRLRSDDAYTPGGEGGKRPDRCTIVYTQRCREAYKDVPVILGGI
EASLRRIAHYDYWSDKVRRSILADAKADLLIYGNAERAVIEVANRIAAGEAPRDLTSVRGVALFRKVPEHFTELHADDLD
SADEAATRHPGDTVIRLPSFEQVENDREAYARASRVLHREANPGNARPLVQRHGDRDLWLNPPPIPLTTEEMDQVYDLPY
ARAPHPAYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRVIQNRSEGSILREIEKIRDQTPGFTGVISDIGGPTA
NMYRMACKDPKIEAACRLPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYVKELVTHHVG
GYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFEAAAKEVGKKYYLIPYFIAAHPGTTDEDMMHLALWLKKNRYRADQVQ
TFLPSPMATATAMYHTGVNTLRGVRRGATEQVETIKGGRQRRLHKAFLRYHDPDNWPLLREALKEMGRADLIGSRPDQLV
PAYQPPGTGKAAGTKRPVRPGSGTQRFTTKGVTLPRR

Sequences:

>Translated_677_residues
MQTLSTAEKASISAPCLRTRTGRGAPFLPMSRAEMDRLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLESQGYRVGIIAQ
PDWHSAEPFKALGKPRLFFGVTGGNLDSMVNRYTSDRRLRSDDAYTPGGEGGKRPDRCTIVYTQRCREAYKDVPVILGGI
EASLRRIAHYDYWSDKVRRSILADAKADLLIYGNAERAVIEVANRIAAGEAPRDLTSVRGVALFRKVPEHFTELHADDLD
SADEAATRHPGDTVIRLPSFEQVENDREAYARASRVLHREANPGNARPLVQRHGDRDLWLNPPPIPLTTEEMDQVYDLPY
ARAPHPAYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRVIQNRSEGSILREIEKIRDQTPGFTGVISDIGGPTA
NMYRMACKDPKIEAACRLPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYVKELVTHHVG
GYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFEAAAKEVGKKYYLIPYFIAAHPGTTDEDMMHLALWLKKNRYRADQVQ
TFLPSPMATATAMYHTGVNTLRGVRRGATEQVETIKGGRQRRLHKAFLRYHDPDNWPLLREALKEMGRADLIGSRPDQLV
PAYQPPGTGKAAGTKRPVRPGSGTQRFTTKGVTLPRR
>Mature_677_residues
MQTLSTAEKASISAPCLRTRTGRGAPFLPMSRAEMDRLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLESQGYRVGIIAQ
PDWHSAEPFKALGKPRLFFGVTGGNLDSMVNRYTSDRRLRSDDAYTPGGEGGKRPDRCTIVYTQRCREAYKDVPVILGGI
EASLRRIAHYDYWSDKVRRSILADAKADLLIYGNAERAVIEVANRIAAGEAPRDLTSVRGVALFRKVPEHFTELHADDLD
SADEAATRHPGDTVIRLPSFEQVENDREAYARASRVLHREANPGNARPLVQRHGDRDLWLNPPPIPLTTEEMDQVYDLPY
ARAPHPAYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRVIQNRSEGSILREIEKIRDQTPGFTGVISDIGGPTA
NMYRMACKDPKIEAACRLPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYVKELVTHHVG
GYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFEAAAKEVGKKYYLIPYFIAAHPGTTDEDMMHLALWLKKNRYRADQVQ
TFLPSPMATATAMYHTGVNTLRGVRRGATEQVETIKGGRQRRLHKAFLRYHDPDNWPLLREALKEMGRADLIGSRPDQLV
PAYQPPGTGKAAGTKRPVRPGSGTQRFTTKGVTLPRR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=653, Percent_Identity=63.3996937212864, Blast_Score=871, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 75642; Mature: 75642

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLSTAEKASISAPCLRTRTGRGAPFLPMSRAEMDRLGWDACDIVLVTGDAYVDHPSFG
CCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCEECCCCHH
MAIIGRLLESQGYRVGIIAQPDWHSAEPFKALGKPRLFFGVTGGNLDSMVNRYTSDRRLR
HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCC
SDDAYTPGGEGGKRPDRCTIVYTQRCREAYKDVPVILGGIEASLRRIAHYDYWSDKVRRS
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHHHH
ILADAKADLLIYGNAERAVIEVANRIAAGEAPRDLTSVRGVALFRKVPEHFTELHADDLD
HHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SADEAATRHPGDTVIRLPSFEQVENDREAYARASRVLHREANPGNARPLVQRHGDRDLWL
CHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC
NPPPIPLTTEEMDQVYDLPYARAPHPAYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITE
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
HEGRVIQNRSEGSILREIEKIRDQTPGFTGVISDIGGPTANMYRMACKDPKIEAACRLPS
CCCCEECCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHCCCCCCHHHHCCCC
CVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYVKELVTHHVG
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC
GYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFEAAAKEVGKKYYLIPYFIAAHPGTTDE
CEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHH
DMMHLALWLKKNRYRADQVQTFLPSPMATATAMYHTGVNTLRGVRRGATEQVETIKGGRQ
HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHCHHH
RRLHKAFLRYHDPDNWPLLREALKEMGRADLIGSRPDQLVPAYQPPGTGKAAGTKRPVRP
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSGTQRFTTKGVTLPRR
CCCCCCEEECCCCCCCC
>Mature Secondary Structure
MQTLSTAEKASISAPCLRTRTGRGAPFLPMSRAEMDRLGWDACDIVLVTGDAYVDHPSFG
CCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCEECCCCHH
MAIIGRLLESQGYRVGIIAQPDWHSAEPFKALGKPRLFFGVTGGNLDSMVNRYTSDRRLR
HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCC
SDDAYTPGGEGGKRPDRCTIVYTQRCREAYKDVPVILGGIEASLRRIAHYDYWSDKVRRS
CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHHHHHHHH
ILADAKADLLIYGNAERAVIEVANRIAAGEAPRDLTSVRGVALFRKVPEHFTELHADDLD
HHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SADEAATRHPGDTVIRLPSFEQVENDREAYARASRVLHREANPGNARPLVQRHGDRDLWL
CHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC
NPPPIPLTTEEMDQVYDLPYARAPHPAYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITE
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
HEGRVIQNRSEGSILREIEKIRDQTPGFTGVISDIGGPTANMYRMACKDPKIEAACRLPS
CCCCEECCCCCCHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHCCCCCCHHHHCCCC
CVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYVKELVTHHVG
CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCC
GYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFEAAAKEVGKKYYLIPYFIAAHPGTTDE
CEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHH
DMMHLALWLKKNRYRADQVQTFLPSPMATATAMYHTGVNTLRGVRRGATEQVETIKGGRQ
HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHCHHH
RRLHKAFLRYHDPDNWPLLREALKEMGRADLIGSRPDQLVPAYQPPGTGKAAGTKRPVRP
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSGTQRFTTKGVTLPRR
CCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]