| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ssuA [H]
Identifier: 158424794
GI number: 158424794
Start: 3624771
End: 3625883
Strand: Reverse
Name: ssuA [H]
Synonym: AZC_3170
Alternate gene names: 158424794
Gene position: 3625883-3624771 (Counterclockwise)
Preceding gene: 158424795
Following gene: 158424793
Centisome position: 67.52
GC content: 64.33
Gene sequence:
>1113_bases ATGCCAATGCCGGAGGTCATTATGGCGACCCGCTTCCGCATCCCGTTCCTGCCCCGATGGACCGCACTGGTGGCGCTCGG CTGCGCCCTGCTCGGGATGGGTGCCGTGGCGCAGGCGGAGCCGCTGGTGGTGCGCATCGGCTTTGCTTCCGTGGGCGTCG ACAATCGCCAGTTCGCCGGCGGCAGCTCGGTCGCCGTCGCCCATGCGGAGGGCTATCTGGAGAAAGCCTTCAAGGATGAT CCGGATGTCCGCTTTGAATGGTATTTCTTCAAGGGCGCCGGCCCGGCGGTGAACGAGGCCATCGCCAATGGCCAGCTCGA TTTCGCCATCCAGGGCGACCTGCCGTCGGTCATCGGCCGCGCCAATGGCCTCAAGACCAAGATCCTCATGGCTTCGGGCG CCCATGCGCCCACCTATCTGGCGGTGCCCGAGGGTTCGACGCTCTCGACCGTCAAGGAGCTGAAGGGGAAAAAAGTCGCC ATCTTCCGCGGCACCAACAACCATCTGGCGGTGGTGAAGGTGCTGGCCGCCAACGGTCTGTCCGAGCGCGACCTGCAAGT GCTCAACATGGACAATGCCACCACCAATTCGGCCCTCGCCAGCAAGGACATCGACGGGGCCTTCGGCAACTGGCCGCTGA TCTCGCTCCATCTCGCGAACCGGGCGAAGATCATCTACTCCACCAAGGGCGATGACCCCGCCTTCGAGCGCCATTCCATG GTGCTGGTGACGGAGGCGTTCGAGAGCGCGCATCCCGAGACGGTGCAGAAGATCATCACCGAATTCGTCCGTGCCGCCCG CTGGTCGTCCGAGCCTGCCAATTTCGATCAGGTGGTGGCCATCTGGGCCCGTTCCGGCACGCCGGAAGCCGTGTTCCGTT ACGACTTCGCCGATACGGACGTGCGCTACCGCAATTCGCCCATCGTCGATCCCTTCCTTGTGGAACAGTACCGCTTCCAG GCCCGGCAGGCGAAGGAGTTCGCTCTCGTGCGGCGGGACGTGGACGTGCGCGGCTGGTTCGAGCCGAAATACGTGGATTC CGCGATCAAGTCCCTCGGTCTTGAGGGCTACTGGACCCGCTACGACTCCAAGGGCAAGCCGCTCGGTTCCTGA
Upstream 100 bases:
>100_bases GCGCCGAAATATCTCCATGCCGCGCTGAAGGAGCTCGGCCTTCAGAACCGCTGGGTCCGCTATGGCGCGGACGGCAAGCC GCTCGGCTCCTGATCCATTC
Downstream 100 bases:
>100_bases CGCTTGCCGCATGCCGGGCCGCCCCCGGCCTGCCTCCAGAAGATCGCCCCAAAGGATCACCATGGCCGTTCTTGATCTCC CCCGTCAGGCCGCTCCCCAT
Product: sulfate ester transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MPMPEVIMATRFRIPFLPRWTALVALGCALLGMGAVAQAEPLVVRIGFASVGVDNRQFAGGSSVAVAHAEGYLEKAFKDD PDVRFEWYFFKGAGPAVNEAIANGQLDFAIQGDLPSVIGRANGLKTKILMASGAHAPTYLAVPEGSTLSTVKELKGKKVA IFRGTNNHLAVVKVLAANGLSERDLQVLNMDNATTNSALASKDIDGAFGNWPLISLHLANRAKIIYSTKGDDPAFERHSM VLVTEAFESAHPETVQKIITEFVRAARWSSEPANFDQVVAIWARSGTPEAVFRYDFADTDVRYRNSPIVDPFLVEQYRFQ ARQAKEFALVRRDVDVRGWFEPKYVDSAIKSLGLEGYWTRYDSKGKPLGS
Sequences:
>Translated_370_residues MPMPEVIMATRFRIPFLPRWTALVALGCALLGMGAVAQAEPLVVRIGFASVGVDNRQFAGGSSVAVAHAEGYLEKAFKDD PDVRFEWYFFKGAGPAVNEAIANGQLDFAIQGDLPSVIGRANGLKTKILMASGAHAPTYLAVPEGSTLSTVKELKGKKVA IFRGTNNHLAVVKVLAANGLSERDLQVLNMDNATTNSALASKDIDGAFGNWPLISLHLANRAKIIYSTKGDDPAFERHSM VLVTEAFESAHPETVQKIITEFVRAARWSSEPANFDQVVAIWARSGTPEAVFRYDFADTDVRYRNSPIVDPFLVEQYRFQ ARQAKEFALVRRDVDVRGWFEPKYVDSAIKSLGLEGYWTRYDSKGKPLGS >Mature_369_residues PMPEVIMATRFRIPFLPRWTALVALGCALLGMGAVAQAEPLVVRIGFASVGVDNRQFAGGSSVAVAHAEGYLEKAFKDDP DVRFEWYFFKGAGPAVNEAIANGQLDFAIQGDLPSVIGRANGLKTKILMASGAHAPTYLAVPEGSTLSTVKELKGKKVAI FRGTNNHLAVVKVLAANGLSERDLQVLNMDNATTNSALASKDIDGAFGNWPLISLHLANRAKIIYSTKGDDPAFERHSMV LVTEAFESAHPETVQKIITEFVRAARWSSEPANFDQVVAIWARSGTPEAVFRYDFADTDVRYRNSPIVDPFLVEQYRFQA RQAKEFALVRRDVDVRGWFEPKYVDSAIKSLGLEGYWTRYDSKGKPLGS
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=310, Percent_Identity=24.8387096774194, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 40588; Mature: 40456
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPEVIMATRFRIPFLPRWTALVALGCALLGMGAVAQAEPLVVRIGFASVGVDNRQFAG CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCCCCC GSSVAVAHAEGYLEKAFKDDPDVRFEWYFFKGAGPAVNEAIANGQLDFAIQGDLPSVIGR CCCEEEEEHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHCCCCEEEEEECCCHHHHHC ANGLKTKILMASGAHAPTYLAVPEGSTLSTVKELKGKKVAIFRGTNNHLAVVKVLAANGL CCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCC SERDLQVLNMDNATTNSALASKDIDGAFGNWPLISLHLANRAKIIYSTKGDDPAFERHSM CCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHCCCE VLVTEAFESAHPETVQKIITEFVRAARWSSEPANFDQVVAIWARSGTPEAVFRYDFADTD EEEEECHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCC VRYRNSPIVDPFLVEQYRFQARQAKEFALVRRDVDVRGWFEPKYVDSAIKSLGLEGYWTR CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEE YDSKGKPLGS ECCCCCCCCC >Mature Secondary Structure PMPEVIMATRFRIPFLPRWTALVALGCALLGMGAVAQAEPLVVRIGFASVGVDNRQFAG CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCCCCCCC GSSVAVAHAEGYLEKAFKDDPDVRFEWYFFKGAGPAVNEAIANGQLDFAIQGDLPSVIGR CCCEEEEEHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHCCCCEEEEEECCCHHHHHC ANGLKTKILMASGAHAPTYLAVPEGSTLSTVKELKGKKVAIFRGTNNHLAVVKVLAANGL CCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCC SERDLQVLNMDNATTNSALASKDIDGAFGNWPLISLHLANRAKIIYSTKGDDPAFERHSM CCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCHHCCCE VLVTEAFESAHPETVQKIITEFVRAARWSSEPANFDQVVAIWARSGTPEAVFRYDFADTD EEEEECHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCC VRYRNSPIVDPFLVEQYRFQARQAKEFALVRRDVDVRGWFEPKYVDSAIKSLGLEGYWTR CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEE YDSKGKPLGS ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]