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The map label for this gene is soxC [H]

Identifier: 158424789

GI number: 158424789

Start: 3619954

End: 3621183

Strand: Direct

Name: soxC [H]

Synonym: AZC_3165

Alternate gene names: 158424789

Gene position: 3619954-3621183 (Clockwise)

Preceding gene: 158424788

Following gene: 158424798

Centisome position: 67.41

GC content: 69.19

Gene sequence:

>1230_bases
GTGAACCAGATCGCCTCGCCACCGCGCCCCACCTTCTCCGGCCCGCTGAGCCATCGCTCGCCGGAGCTGAAGGACCTCTT
CGCCTTCATCGCCGCAGGCGCAGCGGAGCGCGACCGCGAGCGCATCCACCCCTATGAGGTGTTCGATCTCATCCGCAGCG
CCCGCCTCGGCGCGCTGCGCCTGCGGCCAGAGGACGGCGGGCCCGGCGCCAGCCTGCGGGAGCTGTTCGAGGTGGTGATC
GCGCTTGCCGCCGCCGACCCCAACATCGCCCATTCCCTGCGCAATCATTATGCCTTCGTGGAGCGCTATCCCCTCTCACG
CCGCGCGTCCCACCGCAAGAAGTGGGCGGATGTGACCGCCAGCGGCGCCATCGTCGGCCTCGCCAGCACGGAGTTGACCA
GCCCGCGCGTCGGTGCCAGCCCCTTCGAGACGAAGCTGGTGCCGGAGGGCAACGGCTTCCGCCTGACGGGCACGAAATAT
TACAGCACCGGCACGCTCTATGCGGACTATGTGCAGGTGCGCGCCGCCGGCCCGGATGACGCCGTGCTCACCGCCATCAT
CCCCACCACCCGCGAGGGCATCGAGCGGATCGACGACTGGGACGGTGCCGGCCAGCGCCTCACCGGCTCCGGCACCACGC
ACTTCCACAATGTGCGGGTGGAGGCGGATGAGATCGAGCCGGACAGCCTGACGACCGGCTATGGCGTGCCGCACAGCAAC
AGCCTGGCCCAGCTCCTCGTTACGGCCACCGTCGCCGGCATCCTGCGCAACATCCTCACGGACTCGGTGGCGCTCTTGAA
CAGCCGCAAGGACCGCCACTTCTATTTCGCCCAGACCGAGCGGGTGGCGGACGACCCGCTGCTCCAGCAGATCATCGGCC
AGCTCTCGGCCAATGCCTATGCGGCCGAGGTACTGATCCTCGCCGCCGCCGACGCCCATGATCTGGTGTTCCAGGCCCGC
GAGCGGGGCGAGCCGGACGCGGAACTGGCCCATCAGGCCTCGCTTGCCGCCTCCAAGGCGAAGCTGATCGTGGACGACCT
CACCATTCGCGGCGGCAGCCAGCTGTTCGATGTGGCCGGCGCCTCCGCCACCCGGCGTGCGAAGAATCTCGACCGCCACT
GGCGCAACGCCCGTACCCTCGCCTCCCACAACCCCGCCGCCCTCAAGGCGCGGGCAATCGGCGACTATGAGCTGCACGGC
ACGTGGCTGCCGGAGAAGGGCTTCTTCTGA

Upstream 100 bases:

>100_bases
GCTCCTCCTCACCCTCACCCGCCCTCTGCTGAAGGGCTACGACCTCGACGCCTGAGGACCGCCTCAGGCGCCTCTCCTGC
CTGCTCCAAGGATGTGACCC

Downstream 100 bases:

>100_bases
GGCCTTCAAAAGCCTCTCATCAAGCAGAAGCCCCGGGACGGCGGACCGTCCCGGGGCTTTCATTCACGCTCACTGGATCG
AAATCAGTTGCGCGCCACCG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MNQIASPPRPTFSGPLSHRSPELKDLFAFIAAGAAERDRERIHPYEVFDLIRSARLGALRLRPEDGGPGASLRELFEVVI
ALAAADPNIAHSLRNHYAFVERYPLSRRASHRKKWADVTASGAIVGLASTELTSPRVGASPFETKLVPEGNGFRLTGTKY
YSTGTLYADYVQVRAAGPDDAVLTAIIPTTREGIERIDDWDGAGQRLTGSGTTHFHNVRVEADEIEPDSLTTGYGVPHSN
SLAQLLVTATVAGILRNILTDSVALLNSRKDRHFYFAQTERVADDPLLQQIIGQLSANAYAAEVLILAAADAHDLVFQAR
ERGEPDAELAHQASLAASKAKLIVDDLTIRGGSQLFDVAGASATRRAKNLDRHWRNARTLASHNPAALKARAIGDYELHG
TWLPEKGFF

Sequences:

>Translated_409_residues
MNQIASPPRPTFSGPLSHRSPELKDLFAFIAAGAAERDRERIHPYEVFDLIRSARLGALRLRPEDGGPGASLRELFEVVI
ALAAADPNIAHSLRNHYAFVERYPLSRRASHRKKWADVTASGAIVGLASTELTSPRVGASPFETKLVPEGNGFRLTGTKY
YSTGTLYADYVQVRAAGPDDAVLTAIIPTTREGIERIDDWDGAGQRLTGSGTTHFHNVRVEADEIEPDSLTTGYGVPHSN
SLAQLLVTATVAGILRNILTDSVALLNSRKDRHFYFAQTERVADDPLLQQIIGQLSANAYAAEVLILAAADAHDLVFQAR
ERGEPDAELAHQASLAASKAKLIVDDLTIRGGSQLFDVAGASATRRAKNLDRHWRNARTLASHNPAALKARAIGDYELHG
TWLPEKGFF
>Mature_409_residues
MNQIASPPRPTFSGPLSHRSPELKDLFAFIAAGAAERDRERIHPYEVFDLIRSARLGALRLRPEDGGPGASLRELFEVVI
ALAAADPNIAHSLRNHYAFVERYPLSRRASHRKKWADVTASGAIVGLASTELTSPRVGASPFETKLVPEGNGFRLTGTKY
YSTGTLYADYVQVRAAGPDDAVLTAIIPTTREGIERIDDWDGAGQRLTGSGTTHFHNVRVEADEIEPDSLTTGYGVPHSN
SLAQLLVTATVAGILRNILTDSVALLNSRKDRHFYFAQTERVADDPLLQQIIGQLSANAYAAEVLILAAADAHDLVFQAR
ERGEPDAELAHQASLAASKAKLIVDDLTIRGGSQLFDVAGASATRRAKNLDRHWRNARTLASHNPAALKARAIGDYELHG
TWLPEKGFF

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44480; Mature: 44480

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIASPPRPTFSGPLSHRSPELKDLFAFIAAGAAERDRERIHPYEVFDLIRSARLGALR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCEEE
LRPEDGGPGASLRELFEVVIALAAADPNIAHSLRNHYAFVERYPLSRRASHRKKWADVTA
EECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
SGAIVGLASTELTSPRVGASPFETKLVPEGNGFRLTGTKYYSTGTLYADYVQVRAAGPDD
CCEEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCEEEECCCEEEEEEEEEECCCCC
AVLTAIIPTTREGIERIDDWDGAGQRLTGSGTTHFHNVRVEADEIEPDSLTTGYGVPHSN
CEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
SLAQLLVTATVAGILRNILTDSVALLNSRKDRHFYFAQTERVADDPLLQQIIGQLSANAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHH
AAEVLILAAADAHDLVFQARERGEPDAELAHQASLAASKAKLIVDDLTIRGGSQLFDVAG
EEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHCC
ASATRRAKNLDRHWRNARTLASHNPAALKARAIGDYELHGTWLPEKGFF
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECEEECCCCCCC
>Mature Secondary Structure
MNQIASPPRPTFSGPLSHRSPELKDLFAFIAAGAAERDRERIHPYEVFDLIRSARLGALR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCCCCEEE
LRPEDGGPGASLRELFEVVIALAAADPNIAHSLRNHYAFVERYPLSRRASHRKKWADVTA
EECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
SGAIVGLASTELTSPRVGASPFETKLVPEGNGFRLTGTKYYSTGTLYADYVQVRAAGPDD
CCEEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEECCEEEECCCEEEEEEEEEECCCCC
AVLTAIIPTTREGIERIDDWDGAGQRLTGSGTTHFHNVRVEADEIEPDSLTTGYGVPHSN
CEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
SLAQLLVTATVAGILRNILTDSVALLNSRKDRHFYFAQTERVADDPLLQQIIGQLSANAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHH
AAEVLILAAADAHDLVFQARERGEPDAELAHQASLAASKAKLIVDDLTIRGGSQLFDVAG
EEEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHCC
ASATRRAKNLDRHWRNARTLASHNPAALKARAIGDYELHGTWLPEKGFF
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]