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The map label for this gene is yedY [H]

Identifier: 158424760

GI number: 158424760

Start: 3592475

End: 3593437

Strand: Direct

Name: yedY [H]

Synonym: AZC_3136

Alternate gene names: 158424760

Gene position: 3592475-3593437 (Clockwise)

Preceding gene: 158424759

Following gene: 158424761

Centisome position: 66.9

GC content: 64.59

Gene sequence:

>963_bases
ATGCTCATCAAGTCGAAGCGCGGCTGGGAAATTCCCGAACATCTTGCGACACCGGAAGGCATCTTCCTGTCGCGGCGGCG
CCTGCTTGGGGCGGGCGCCGGACTGATCGGCGCCAGCCTGCTGCCGGGCGTTGCCCAGGCCGCCGAAACCGATCCGTCCG
CCAGCCTCTATCCGGCAAAGCGCAACGAGCGTTACACGCTCGACCGCCCCATGACGCCGGAGAAGGACGCAAGCTCGGTC
AACAATTACTATGAGTTCGGCACCAACTATGACGTCGGCCGCGCCGCCGCCAAACTGAAGGTGCGGCCCTGGACCGTGAC
CATCGACGGCATGGTGGAACAGCCCCGGCAGGTGGGCATCGACGATCTCCTGAAGGCGATGACGCTGGAAGAACGCCTCT
ATCGCCACCGCTGCGTCGAGGCCTGGTCCATGGCCGTTCCCTGGACCGGCTTTCCAATGAAGGCCTTCGTCGATTACGCC
CGTCCGCTCTCGGGCGCGAAATACGTGCGCATGGAGACCTTCCTCGATCGCGACGTGGCGCCCGGCCAGTCCGGCCGCTT
CTATCCCTGGCCCTATGTGGAGGGCCTGACGATGGCCGAGGCGACCAACGAACTCGCCTTCCTTGTCACCGGCGTCTACG
GCAAGCCCGCCCAGAACCAGTTCGGCGCACCGCTGCGGCTGGCAACGCCCTGGAAATACGGCTTCAAGTCCATCAAGGCG
ATCGTGAAGTTCACCTTCACCGACCAGCGGCCCAAGAGCTTCTGGGAAGTGGTGCAGGGCGCGGAATACGGCTTCTGGGC
GAACGTGAACCCGCAGGTGTCGCACCCCCGCTGGAGCCAGGCGACGGAGAAGGACATAGCCACCGGCGAGCGCCGGCCGA
CCCTCCTCTACAACGGTTATGGCGAATTCGTTGCCGGCCTCTATGGCGATCCGGCGCTGAAGGGCGAGAAGCTTTTCATG
TGA

Upstream 100 bases:

>100_bases
CTCCGGCCCGCCCAAGCACTGACCGTGCCTTTACGAAACACGGCCGTTTGAATTGCGCGCGGCCGCCGCGCGCATGATCC
TCCGCCCAACGGAGGATTGC

Downstream 100 bases:

>100_bases
GCGGTAATCCCGCGCTGTGCCGCGCGAAATTTAAAAATGTGTTGCACGCCAGCGCTTGACCGTTGGCGTGCCCGGGGCCA
TCGTCCGCGCAACATGGTGA

Product: sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLIKSKRGWEIPEHLATPEGIFLSRRRLLGAGAGLIGASLLPGVAQAAETDPSASLYPAKRNERYTLDRPMTPEKDASSV
NNYYEFGTNYDVGRAAAKLKVRPWTVTIDGMVEQPRQVGIDDLLKAMTLEERLYRHRCVEAWSMAVPWTGFPMKAFVDYA
RPLSGAKYVRMETFLDRDVAPGQSGRFYPWPYVEGLTMAEATNELAFLVTGVYGKPAQNQFGAPLRLATPWKYGFKSIKA
IVKFTFTDQRPKSFWEVVQGAEYGFWANVNPQVSHPRWSQATEKDIATGERRPTLLYNGYGEFVAGLYGDPALKGEKLFM

Sequences:

>Translated_320_residues
MLIKSKRGWEIPEHLATPEGIFLSRRRLLGAGAGLIGASLLPGVAQAAETDPSASLYPAKRNERYTLDRPMTPEKDASSV
NNYYEFGTNYDVGRAAAKLKVRPWTVTIDGMVEQPRQVGIDDLLKAMTLEERLYRHRCVEAWSMAVPWTGFPMKAFVDYA
RPLSGAKYVRMETFLDRDVAPGQSGRFYPWPYVEGLTMAEATNELAFLVTGVYGKPAQNQFGAPLRLATPWKYGFKSIKA
IVKFTFTDQRPKSFWEVVQGAEYGFWANVNPQVSHPRWSQATEKDIATGERRPTLLYNGYGEFVAGLYGDPALKGEKLFM
>Mature_320_residues
MLIKSKRGWEIPEHLATPEGIFLSRRRLLGAGAGLIGASLLPGVAQAAETDPSASLYPAKRNERYTLDRPMTPEKDASSV
NNYYEFGTNYDVGRAAAKLKVRPWTVTIDGMVEQPRQVGIDDLLKAMTLEERLYRHRCVEAWSMAVPWTGFPMKAFVDYA
RPLSGAKYVRMETFLDRDVAPGQSGRFYPWPYVEGLTMAEATNELAFLVTGVYGKPAQNQFGAPLRLATPWKYGFKSIKA
IVKFTFTDQRPKSFWEVVQGAEYGFWANVNPQVSHPRWSQATEKDIATGERRPTLLYNGYGEFVAGLYGDPALKGEKLFM

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=324, Percent_Identity=43.2098765432099, Blast_Score=249, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 35939; Mature: 35939

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKSKRGWEIPEHLATPEGIFLSRRRLLGAGAGLIGASLLPGVAQAAETDPSASLYPAK
CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
RNERYTLDRPMTPEKDASSVNNYYEFGTNYDVGRAAAKLKVRPWTVTIDGMVEQPRQVGI
CCCCEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHEEEEECCEEEEECCHHCCHHHCCH
DDLLKAMTLEERLYRHRCVEAWSMAVPWTGFPMKAFVDYARPLSGAKYVRMETFLDRDVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHCCCCC
PGQSGRFYPWPYVEGLTMAEATNELAFLVTGVYGKPAQNQFGAPLRLATPWKYGFKSIKA
CCCCCCCCCCCHHCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHH
IVKFTFTDQRPKSFWEVVQGAEYGFWANVNPQVSHPRWSQATEKDIATGERRPTLLYNGY
HHHEECCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCH
GEFVAGLYGDPALKGEKLFM
HHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLIKSKRGWEIPEHLATPEGIFLSRRRLLGAGAGLIGASLLPGVAQAAETDPSASLYPAK
CCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
RNERYTLDRPMTPEKDASSVNNYYEFGTNYDVGRAAAKLKVRPWTVTIDGMVEQPRQVGI
CCCCEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHEEEEECCEEEEECCHHCCHHHCCH
DDLLKAMTLEERLYRHRCVEAWSMAVPWTGFPMKAFVDYARPLSGAKYVRMETFLDRDVA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEHHHHHHCCCCC
PGQSGRFYPWPYVEGLTMAEATNELAFLVTGVYGKPAQNQFGAPLRLATPWKYGFKSIKA
CCCCCCCCCCCHHCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHH
IVKFTFTDQRPKSFWEVVQGAEYGFWANVNPQVSHPRWSQATEKDIATGERRPTLLYNGY
HHHEECCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCH
GEFVAGLYGDPALKGEKLFM
HHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA