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The map label for this gene is xseB [H]

Identifier: 158424740

GI number: 158424740

Start: 3568339

End: 3568620

Strand: Reverse

Name: xseB [H]

Synonym: AZC_3116

Alternate gene names: 158424740

Gene position: 3568620-3568339 (Counterclockwise)

Preceding gene: 158424743

Following gene: 158424737

Centisome position: 66.46

GC content: 69.15

Gene sequence:

>282_bases
ATGGCCGAGACCAGCAAGACGGACGCCAAGACCAAGGCCGCAGCCGGTCCCGCCGTGTCCACCCTCTCCTTCGAGGCGGC
GCTTGCCGAGCTTGAGAGCATCGTCCAGCGCCTGGAGGCCGGAAACGTGCCGCTGGAAGAGAGCATCGCCATCTATGAGC
GCGGCGAAGCGCTCAAGAAGCGCTGCGAGGCGCTGTTGGGCGAAGCCGAGGCCCGGGTTGCCACCATCACCCGCGATGCG
GATGGCCGGCCCACCGGCACGGCGCCTCTCGATCCGGCCTGA

Upstream 100 bases:

>100_bases
TCGGCGTCCGCGACCACCCTGTGACAGCCGATGGCGCCTTAAGGGCGGCGCAGTGCTCCGATATAAGGAGCGCAAGCATT
GAGATTCGGAAGGACAGCCC

Downstream 100 bases:

>100_bases
GCTGTCCCGGAACGGCACAGCCCTGCCTCTCCAAAAGGAACGCGGCTGGAACGCAGCGTGTCCGAATCGAGTGACGCGGT
CCGGACGCGGTTCGTTCCGC

Product: exonuclease VII small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MAETSKTDAKTKAAAGPAVSTLSFEAALAELESIVQRLEAGNVPLEESIAIYERGEALKKRCEALLGEAEARVATITRDA
DGRPTGTAPLDPA

Sequences:

>Translated_93_residues
MAETSKTDAKTKAAAGPAVSTLSFEAALAELESIVQRLEAGNVPLEESIAIYERGEALKKRCEALLGEAEARVATITRDA
DGRPTGTAPLDPA
>Mature_92_residues
AETSKTDAKTKAAAGPAVSTLSFEAALAELESIVQRLEAGNVPLEESIAIYERGEALKKRCEALLGEAEARVATITRDAD
GRPTGTAPLDPA

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 9683; Mature: 9552

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETSKTDAKTKAAAGPAVSTLSFEAALAELESIVQRLEAGNVPLEESIAIYERGEALKK
CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RCEALLGEAEARVATITRDADGRPTGTAPLDPA
HHHHHHCCHHHHHEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AETSKTDAKTKAAAGPAVSTLSFEAALAELESIVQRLEAGNVPLEESIAIYERGEALKK
CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
RCEALLGEAEARVATITRDADGRPTGTAPLDPA
HHHHHHCCHHHHHEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA