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The map label for this gene is cmpB [H]

Identifier: 158424701

GI number: 158424701

Start: 3517655

End: 3519403

Strand: Reverse

Name: cmpB [H]

Synonym: AZC_3077

Alternate gene names: 158424701

Gene position: 3519403-3517655 (Counterclockwise)

Preceding gene: 158424702

Following gene: 158424700

Centisome position: 65.54

GC content: 66.78

Gene sequence:

>1749_bases
GTGTCCGTCATGTTTTTCCAATCCGCCGCTGTCACCACGACGCGCGATCCGCGTCGTTCCTTCGTGACCCCCTTCGACCT
GTTCGCCTTCCTGCTGGTGTTCGGGATGTTTGCCCTCTTCACGCAGGGCACGCAGCAGACGCTCATCCCCATCTCTGAGA
TGGAACAGGCGCCGATCTCGCTCAGTCCGTGGGATCTGCCGGAATATGCCCTGCGCACCACGCTGCGCATGCTGGCGGCG
ATCGTGGCCTCGCTGGTCTTCACCTTCATCTACGGTGCGCTTGCGGCGAAGAGCCGGCGGGCGGAGATGGTGCTCATCCC
GGTGCTGGACATCCTCCAGTCGGTGCCGGTGCTGGGCTTCCTGTCCTTCACCGTGCTGTTCTTCATGAATCTGTTCCCCG
GCAAGGTGATTGGCGTCGAGATGGCGGCGGTGTTCGCCATCTTCACCAGCCAGGCCTGGAACATGACCTTCAGCTTCTAC
CAGTCGCTGAAGACGCTGCCGCGCGACCTCGTGGAGGTCTCGCGCGGCTTTCGCCTCACCGGCTGGCAGCGCTTCTGGCG
GCTGGAGGTGCCCTTCTCCATGCCGGGCCTCGTGTGGAACACGATGATGTCCATGTCGGGCGGGTGGTTCTTCGTGGTGG
CGTCGGAGGCCATTTCGGTTGGCAACACCACCATCACCCTGCCGGGCATCGGCGCCTATGTGTCCACCGCCATCGCCGAA
CGGAATCTCACAGCCGTGGCGTGGTCGGTCGGGGCGATGCTGGTCATCATCCTGATCTACGACCAGCTGCTGTTCCGCCC
GCTGGTGGCCTGGGCCGACCGCTTCCGCTTCGAGCAGTCCGCGGGCGCGCCGCCGCCGCGCTCCTGGGTGCTCGACATGG
TGAAGCGGGCGCATCTGTTCCGCCTCCTCCTGTCGCCCGTCGGCGGCCTGTTCCGCGGACTCGCGGCCCTGCCGCTGCGC
CTGCCCGTGCGCCTGCCGGGGCAGGTGAACGCCGCCTGGTCCAGCCGGCCCATGGATCACGCCTGGCTGGTGATGGTCGT
CGCCATGGCCGTCTATGGCGTTTGGCTCATCGTCAGCTTCGTCGCCACCGAGGTGGGGCTCGCCGAGGTGGGCCATGTGT
TCTGGCTCGGCTTCCTGACGCTGATCCGGGTGGCGGTGCTGATCGCGCTCGCCTCCCTCATCTGGGTGCCCGTAGGGGTC
TGGATCGGCCTCCGGCCCAAGGTTGCGAACGCGCTGCAGCCGGTGGCGCAGTTCCTCGCCGCCTTCCCGGCCAACATCGT
CTTTCCGTTCGCGGTGGTGGTGATCGTGCGCCTCGGGCTCGATCCCAACATCTGGCTGTCGCCGCTGATGGTGCTGGGCA
CCCAGTGGTACATCCTCTTCAACGTCATCGCGGGCGCCAGCGCCTTTCCCAATGACATGAAGGAGGCGGCCTCCTCCTTC
CACCTGCGCGGGGCGCAGTGGTGGTTCAAGGTCATCCTGCCGGGGGTGTTCCCTTATTACGTGACCGGCGCCCTCACCGC
GAGCGGGGGCTCCTGGAACGCCTCCATCGTCGCCGAGGTGGCGAGCTGGGGCTCGACCACGCTCCGCGCCGAGGGGCTCG
GCTCCTACATCGCCGATGCCACCACGGCGGCGGACTATCCGCGCATCACGCTGGGCATCGCCGTCATGTCGCTCTACGTC
ATCGCCTTCAACCGCACCCTCTGGCGGCCGCTGTTCGATTTCGCCGCCAAGCGCCTGCGCCTCGACTGA

Upstream 100 bases:

>100_bases
TGCGCGAGCGAGCGCATGTCCCGCCGGACCGGGCCGCTCTCCCGTGCCGGCGTGATGTTTTCTCGCTCGGCGGGCGTTCC
TTCCGTCTCGTACACAGCGG

Downstream 100 bases:

>100_bases
GGAAATCCACCATGCTCGACAACCGCTCCGTTGAGGTCAACGCGCCGCTCGTGCAGCTCTCGCATGTGGTGCAGTCGTTC
AAGAAGAGCGACAACAACCG

Product: nitrate ABC transporter permease

Products: ADP; phosphate; L-proline [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MSVMFFQSAAVTTTRDPRRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPISLSPWDLPEYALRTTLRMLAA
IVASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGFLSFTVLFFMNLFPGKVIGVEMAAVFAIFTSQAWNMTFSFY
QSLKTLPRDLVEVSRGFRLTGWQRFWRLEVPFSMPGLVWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAE
RNLTAVAWSVGAMLVIILIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLFRLLLSPVGGLFRGLAALPLR
LPVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVSFVATEVGLAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGV
WIGLRPKVANALQPVAQFLAAFPANIVFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASSF
HLRGAQWWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIADATTAADYPRITLGIAVMSLYV
IAFNRTLWRPLFDFAAKRLRLD

Sequences:

>Translated_582_residues
MSVMFFQSAAVTTTRDPRRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPISLSPWDLPEYALRTTLRMLAA
IVASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGFLSFTVLFFMNLFPGKVIGVEMAAVFAIFTSQAWNMTFSFY
QSLKTLPRDLVEVSRGFRLTGWQRFWRLEVPFSMPGLVWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAE
RNLTAVAWSVGAMLVIILIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLFRLLLSPVGGLFRGLAALPLR
LPVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVSFVATEVGLAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGV
WIGLRPKVANALQPVAQFLAAFPANIVFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASSF
HLRGAQWWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIADATTAADYPRITLGIAVMSLYV
IAFNRTLWRPLFDFAAKRLRLD
>Mature_581_residues
SVMFFQSAAVTTTRDPRRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPISLSPWDLPEYALRTTLRMLAAI
VASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGFLSFTVLFFMNLFPGKVIGVEMAAVFAIFTSQAWNMTFSFYQ
SLKTLPRDLVEVSRGFRLTGWQRFWRLEVPFSMPGLVWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAER
NLTAVAWSVGAMLVIILIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLFRLLLSPVGGLFRGLAALPLRL
PVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVSFVATEVGLAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGVW
IGLRPKVANALQPVAQFLAAFPANIVFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASSFH
LRGAQWWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIADATTAADYPRITLGIAVMSLYVI
AFNRTLWRPLFDFAAKRLRLD

Specific function: Part of the ABC transporter complex CmpABCD involved in bicarbonate transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4986

COG function: function code P; ABC-type anion transport system, duplicated permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005889 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 64297; Mature: 64166

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVMFFQSAAVTTTRDPRRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPIS
CCEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCCCC
LSPWDLPEYALRTTLRMLAAIVASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCHHHH
LSFTVLFFMNLFPGKVIGVEMAAVFAIFTSQAWNMTFSFYQSLKTLPRDLVEVSRGFRLT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
GWQRFWRLEVPFSMPGLVWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAE
CHHHHEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHCCCCCEEECCCCHHHHHHHHHH
RNLTAVAWSVGAMLVIILIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RLLLSPVGGLFRGLAALPLRLPVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVSF
HHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VATEVGLAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGVWIGLRPKVANALQPVAQFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AFPANIVFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASSF
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HLRGAQWWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIADA
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
TTAADYPRITLGIAVMSLYVIAFNRTLWRPLFDFAAKRLRLD
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVMFFQSAAVTTTRDPRRSFVTPFDLFAFLLVFGMFALFTQGTQQTLIPISEMEQAPIS
CEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHCCCCCC
LSPWDLPEYALRTTLRMLAAIVASLVFTFIYGALAAKSRRAEMVLIPVLDILQSVPVLGF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCHHHH
LSFTVLFFMNLFPGKVIGVEMAAVFAIFTSQAWNMTFSFYQSLKTLPRDLVEVSRGFRLT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
GWQRFWRLEVPFSMPGLVWNTMMSMSGGWFFVVASEAISVGNTTITLPGIGAYVSTAIAE
CHHHHEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHHCCCCCEEECCCCHHHHHHHHHH
RNLTAVAWSVGAMLVIILIYDQLLFRPLVAWADRFRFEQSAGAPPPRSWVLDMVKRAHLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RLLLSPVGGLFRGLAALPLRLPVRLPGQVNAAWSSRPMDHAWLVMVVAMAVYGVWLIVSF
HHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VATEVGLAEVGHVFWLGFLTLIRVAVLIALASLIWVPVGVWIGLRPKVANALQPVAQFLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AFPANIVFPFAVVVIVRLGLDPNIWLSPLMVLGTQWYILFNVIAGASAFPNDMKEAASSF
HCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
HLRGAQWWFKVILPGVFPYYVTGALTASGGSWNASIVAEVASWGSTTLRAEGLGSYIADA
CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHH
TTAADYPRITLGIAVMSLYVIAFNRTLWRPLFDFAAKRLRLD
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-proline [Periplasm]; H2O [C]

Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]