Click here to switch to the map view.

The map label for this gene is yfgC [H]

Identifier: 158424695

GI number: 158424695

Start: 3511249

End: 3512784

Strand: Direct

Name: yfgC [H]

Synonym: AZC_3071

Alternate gene names: 158424695

Gene position: 3511249-3512784 (Clockwise)

Preceding gene: 158424687

Following gene: 158424696

Centisome position: 65.39

GC content: 69.53

Gene sequence:

>1536_bases
GTGGGGCGTGGTAACGCGCCGCCGCACTGTCGCCAAGGGGCGGGCGCAACCCGCCGCATGGTTCAGGAAGACGACCGAGC
ACCATTCGTGGGGGATCGACTGCTCGTGATGTTCGCCAGCCGCGCCGTTTGCCCAACCCGCGTCCTGCGCCGCGCATCCA
GCGTGGCGCTCAGCCTCATCGCCAGTTGCCATCTGGCGCTTGCCCCGGCGCAGGCGCAGGAGAAGTCCGGTCGCGGCCTG
CCGACCATCCGCGACACCGAGATCGAGAACCTGCTGCGCGACTACACCCGCCCCATCCTGCGCGCCGCCAAGCTGGCGCA
GCAGAACATCGAGGTGGTGCTGGTCAACGACCGCAGCTTCAACGCCTTCGTGGCGGACGGCCGGCGCATCTTCATCAACA
CCGGCGCGCTCGTCGATTCGACGACGCCCAACCAGATCATCGGCGTGCTCGCCCATGAGACCGGCCATATCGCCGGCGGC
CACCTCGCCCGGCGCCGCGAGCAGCTCGCGGGCGCGCAGACCATGGCCATCGTCGCCATGATGCTGGCGGCGGGCGGAGT
CGCGGCGGGCGCGGCAAGCGGGGCCAATGGCGGCAACATGGGCAATGCGGCGGCGGGCGCTGTCATGGCGCCGCAGGAGA
TGATCCGCCGTTCGCTCCTCGCCTATCAGCGCGAGGAAGAGCAGGCCGCCGACCGGTCGGCAGTCACCTATCTCAACGCC
ACCCAGCAGTCGGCCAAGGGCATGCTGGAGACGTTCGAGCGCTTCCAGAACGACCAGTTGTTCCTGACCCAGCGCACCGA
TCCCTACCTGCTGAGCCACCCCATGGCCCGCGAGCGCATCGCGGCGCTGGAGGTGCTCGCCAAGGCCAGCCCCTATTTCA
ACGCCAAGGACCCGCCTGCCCTCCAGCACCGGCACGACATGATGCGGGCAAAGCTCATCGGCTTCCAGGAGCGGCCGGAC
GTGGTGGCGCGGCGCTATCCGCCCACCGACCAGTCCCTGCCCGCCCAATATGCCCGCGCCATCTCCGCCTATCGCTTCGC
CAGCATGTCCGGGGCGGTGGCGCAGATCGACGCTCTCATCGCCAAGGAGCCGGGCAATCCCTATTTCCAGGAACTGAAGG
GGCAGGCGCTGCTGGAGAGCGGCCGGGCGAGCGAGGCGGTGCCGCCGCTGCGCAAGGCGGTGGCCATGACCGACGGCGCA
CCGCTGATCCGCGCCATGCTCGGGCAGGCGCTGGTGGAGACCGGCAATGCGGGCATGATGGACGAGGCCATCCGCGAGCT
GACCTTCTCAACCCAGCGCGATCCGGACAATGCCTCGGGCTGGCGCGCCCTTGCCAAGGCCTACGGTTTCAAGAACAACA
GGCCGCAGGCGGATCTCGCCTCGGCGCAGGCGGCGCTCGCCACCGGCGACGTCCGCACCGCGCGGGAACTCGCCGCCCGC
GCGCGCCAGACCTTTCCCCCCAATTCGCCCGGCTGGCTGAAGGCGGACGACATCGTCAACATCAAGCCGCCGCAATCCAG
CGACAATCGCCAGTAG

Upstream 100 bases:

>100_bases
CGGAAGACGCAGCGTCAGCCAAGCCGCCGTCTTGCCGCCGCATTCGCCCCGAGGGTAGACGCTAGGACAACCGGAGCGGC
AAGCCGTTCCGGCGGAACCG

Downstream 100 bases:

>100_bases
AATTGCCCTTCCGAACATGGAGAGACCGATGCTGTCCCGAACCGGCCTGCGTGCCGCCCTCGCCGCTGTGGCCGCCCTCG
GGCTGACGGCAACCACCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MGRGNAPPHCRQGAGATRRMVQEDDRAPFVGDRLLVMFASRAVCPTRVLRRASSVALSLIASCHLALAPAQAQEKSGRGL
PTIRDTEIENLLRDYTRPILRAAKLAQQNIEVVLVNDRSFNAFVADGRRIFINTGALVDSTTPNQIIGVLAHETGHIAGG
HLARRREQLAGAQTMAIVAMMLAAGGVAAGAASGANGGNMGNAAAGAVMAPQEMIRRSLLAYQREEEQAADRSAVTYLNA
TQQSAKGMLETFERFQNDQLFLTQRTDPYLLSHPMARERIAALEVLAKASPYFNAKDPPALQHRHDMMRAKLIGFQERPD
VVARRYPPTDQSLPAQYARAISAYRFASMSGAVAQIDALIAKEPGNPYFQELKGQALLESGRASEAVPPLRKAVAMTDGA
PLIRAMLGQALVETGNAGMMDEAIRELTFSTQRDPDNASGWRALAKAYGFKNNRPQADLASAQAALATGDVRTARELAAR
ARQTFPPNSPGWLKADDIVNIKPPQSSDNRQ

Sequences:

>Translated_511_residues
MGRGNAPPHCRQGAGATRRMVQEDDRAPFVGDRLLVMFASRAVCPTRVLRRASSVALSLIASCHLALAPAQAQEKSGRGL
PTIRDTEIENLLRDYTRPILRAAKLAQQNIEVVLVNDRSFNAFVADGRRIFINTGALVDSTTPNQIIGVLAHETGHIAGG
HLARRREQLAGAQTMAIVAMMLAAGGVAAGAASGANGGNMGNAAAGAVMAPQEMIRRSLLAYQREEEQAADRSAVTYLNA
TQQSAKGMLETFERFQNDQLFLTQRTDPYLLSHPMARERIAALEVLAKASPYFNAKDPPALQHRHDMMRAKLIGFQERPD
VVARRYPPTDQSLPAQYARAISAYRFASMSGAVAQIDALIAKEPGNPYFQELKGQALLESGRASEAVPPLRKAVAMTDGA
PLIRAMLGQALVETGNAGMMDEAIRELTFSTQRDPDNASGWRALAKAYGFKNNRPQADLASAQAALATGDVRTARELAAR
ARQTFPPNSPGWLKADDIVNIKPPQSSDNRQ
>Mature_510_residues
GRGNAPPHCRQGAGATRRMVQEDDRAPFVGDRLLVMFASRAVCPTRVLRRASSVALSLIASCHLALAPAQAQEKSGRGLP
TIRDTEIENLLRDYTRPILRAAKLAQQNIEVVLVNDRSFNAFVADGRRIFINTGALVDSTTPNQIIGVLAHETGHIAGGH
LARRREQLAGAQTMAIVAMMLAAGGVAAGAASGANGGNMGNAAAGAVMAPQEMIRRSLLAYQREEEQAADRSAVTYLNAT
QQSAKGMLETFERFQNDQLFLTQRTDPYLLSHPMARERIAALEVLAKASPYFNAKDPPALQHRHDMMRAKLIGFQERPDV
VARRYPPTDQSLPAQYARAISAYRFASMSGAVAQIDALIAKEPGNPYFQELKGQALLESGRASEAVPPLRKAVAMTDGAP
LIRAMLGQALVETGNAGMMDEAIRELTFSTQRDPDNASGWRALAKAYGFKNNRPQADLASAQAALATGDVRTARELAARA
RQTFPPNSPGWLKADDIVNIKPPQSSDNRQ

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=385, Percent_Identity=25.1948051948052, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 55194; Mature: 55062

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGNAPPHCRQGAGATRRMVQEDDRAPFVGDRLLVMFASRAVCPTRVLRRASSVALSLI
CCCCCCCCCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ASCHLALAPAQAQEKSGRGLPTIRDTEIENLLRDYTRPILRAAKLAQQNIEVVLVNDRSF
HHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
NAFVADGRRIFINTGALVDSTTPNQIIGVLAHETGHIAGGHLARRREQLAGAQTMAIVAM
CEEEECCCEEEEECCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MLAAGGVAAGAASGANGGNMGNAAAGAVMAPQEMIRRSLLAYQREEEQAADRSAVTYLNA
HHHHCCHHHCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQQSAKGMLETFERFQNDQLFLTQRTDPYLLSHPMARERIAALEVLAKASPYFNAKDPPA
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
LQHRHDMMRAKLIGFQERPDVVARRYPPTDQSLPAQYARAISAYRFASMSGAVAQIDALI
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
AKEPGNPYFQELKGQALLESGRASEAVPPLRKAVAMTDGAPLIRAMLGQALVETGNAGMM
HCCCCCHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
DEAIRELTFSTQRDPDNASGWRALAKAYGFKNNRPQADLASAQAALATGDVRTARELAAR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
ARQTFPPNSPGWLKADDIVNIKPPQSSDNRQ
HHHCCCCCCCCCEECCCEEECCCCCCCCCCC
>Mature Secondary Structure 
GRGNAPPHCRQGAGATRRMVQEDDRAPFVGDRLLVMFASRAVCPTRVLRRASSVALSLI
CCCCCCCCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ASCHLALAPAQAQEKSGRGLPTIRDTEIENLLRDYTRPILRAAKLAQQNIEVVLVNDRSF
HHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
NAFVADGRRIFINTGALVDSTTPNQIIGVLAHETGHIAGGHLARRREQLAGAQTMAIVAM
CEEEECCCEEEEECCCEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MLAAGGVAAGAASGANGGNMGNAAAGAVMAPQEMIRRSLLAYQREEEQAADRSAVTYLNA
HHHHCCHHHCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQQSAKGMLETFERFQNDQLFLTQRTDPYLLSHPMARERIAALEVLAKASPYFNAKDPPA
HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
LQHRHDMMRAKLIGFQERPDVVARRYPPTDQSLPAQYARAISAYRFASMSGAVAQIDALI
HHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
AKEPGNPYFQELKGQALLESGRASEAVPPLRKAVAMTDGAPLIRAMLGQALVETGNAGMM
HCCCCCHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
DEAIRELTFSTQRDPDNASGWRALAKAYGFKNNRPQADLASAQAALATGDVRTARELAAR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
ARQTFPPNSPGWLKADDIVNIKPPQSSDNRQ
HHHCCCCCCCCCEECCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]