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The map label for this gene is yfdZ [C]

Identifier: 158424694

GI number: 158424694

Start: 3509933

End: 3511120

Strand: Reverse

Name: yfdZ [C]

Synonym: AZC_3070

Alternate gene names: 158424694

Gene position: 3511120-3509933 (Counterclockwise)

Preceding gene: 158424700

Following gene: 158424693

Centisome position: 65.39

GC content: 68.1

Gene sequence:

>1188_bases
GTGATGTCCTCCCTCGTGCTTCCTCCCGCGCTCGTTCCCGCCTCCCGTCGTTCGGAGGTCGCGCCCTTCATCGTGATGGA
CGTGATGGAGCACGCGGCCCGCCTGGAAGCCGAGGGGGCGAAGGTGATCCACATGGAGGTGGGCCAGCCCGCCGCGCCCG
CGCCGCGCACCGCCCGCAAGGCGGCGGCCGCCGCGCTGGAGCGCGGGCAGGTGGGCTATACGGCGGCGCTGGGCATTCCC
TCCCTGCGCGCCCGCATCGCGAAGCACTACAAGGAGCAGCACGGGTTCGACCTCGATCCCGAGCGGGTGGTGGTGACCAA
CGGCTCGTCCGGCGGCTTCATCCTCGCCTTCCTGGCCCTGTTCGAGGCCGGCGACCGGGTGGCCATCGCCGCCCCCGGCT
ATCCGCCCTATCGCCATGTGCTCTCGGCGCTCGGCTGCGAGCCGGTGCTGATCGAGACCAAGGCGGAAGACCGATTCGCC
CTGACCCCCGAGACGCTGCGCGCCGCCCATGCGGAAAAGCCGCTGAAAGGCGTGCTGGTGGCGAGCCCCGCCAATCCCAC
CGGCACCATGATGGACCGCACGGCGCTCACCGCCCTTTATGCGGCGGCCAAGGAACTCGGCCTGCGTTTCGTGTCGGATG
AGATCTACCACGGCCTCGATTATGCCTTCCCGGCGGTGACGGCGGCCGAGGTGGCCCCCGATGCCGTGGTCATCAATTCC
TTCTCCAAATACTTCTGCATGACCGGCTGGCGCGTCGGCTGGATGGTGGTGCCCGAGGGCATGTCGCGCACCATGGAGCG
CCTGCAGCAGAACTTCTCCATCTCCGTGCCCACCCTGTCGCAGATCGCCGCAGAGGCCGCCTTCGACGGGCGGGAGGAGA
TGGATGCGGTGAAGCATGGCTATGAGGAAAACCGCCGCATCCTGACCGAAGGTCTTCCCAAGATCGGGCTCGAGCATTTC
CTGCCGGCCGACGGCGCCTTTTATCTTTATGCGGATGTGTCCCGTTTCACGGGCGACTCGCACGCCTTCGCGACGCGGCT
TCTCGACGCGGCGCACGTTGCGGCGACCCCGGGCGTGGACTTCGATCCCTTCCGTGGCAAGCAGTTCCTGCGCTTCTCCT
ATGCCGGGTCGGCGGAAGACATGCGGGCGGCGGTGGCGCGCATCGGGCACTTCCTCTCCAAGGAATAG

Upstream 100 bases:

>100_bases
GGTTGTCCTAGCGTCTACCCTCGGGGCGAATGCGGCGGCAAGACGGCGGCTTGGCTGACGCTGCGTCTTCCGTGCCCGTT
TCCCGATCACGAAAGCGAAT

Downstream 100 bases:

>100_bases
TGCAGTTCTGCTGTCGCATTACTTGGTTGCGCCCCTGTCGTCCGGCCCTCACACTCCCGTCCCATAAAAACAAAGGCATA
CGGGACGAAAACGGGAGGGC

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MMSSLVLPPALVPASRRSEVAPFIVMDVMEHAARLEAEGAKVIHMEVGQPAAPAPRTARKAAAAALERGQVGYTAALGIP
SLRARIAKHYKEQHGFDLDPERVVVTNGSSGGFILAFLALFEAGDRVAIAAPGYPPYRHVLSALGCEPVLIETKAEDRFA
LTPETLRAAHAEKPLKGVLVASPANPTGTMMDRTALTALYAAAKELGLRFVSDEIYHGLDYAFPAVTAAEVAPDAVVINS
FSKYFCMTGWRVGWMVVPEGMSRTMERLQQNFSISVPTLSQIAAEAAFDGREEMDAVKHGYEENRRILTEGLPKIGLEHF
LPADGAFYLYADVSRFTGDSHAFATRLLDAAHVAATPGVDFDPFRGKQFLRFSYAGSAEDMRAAVARIGHFLSKE

Sequences:

>Translated_395_residues
MMSSLVLPPALVPASRRSEVAPFIVMDVMEHAARLEAEGAKVIHMEVGQPAAPAPRTARKAAAAALERGQVGYTAALGIP
SLRARIAKHYKEQHGFDLDPERVVVTNGSSGGFILAFLALFEAGDRVAIAAPGYPPYRHVLSALGCEPVLIETKAEDRFA
LTPETLRAAHAEKPLKGVLVASPANPTGTMMDRTALTALYAAAKELGLRFVSDEIYHGLDYAFPAVTAAEVAPDAVVINS
FSKYFCMTGWRVGWMVVPEGMSRTMERLQQNFSISVPTLSQIAAEAAFDGREEMDAVKHGYEENRRILTEGLPKIGLEHF
LPADGAFYLYADVSRFTGDSHAFATRLLDAAHVAATPGVDFDPFRGKQFLRFSYAGSAEDMRAAVARIGHFLSKE
>Mature_395_residues
MMSSLVLPPALVPASRRSEVAPFIVMDVMEHAARLEAEGAKVIHMEVGQPAAPAPRTARKAAAAALERGQVGYTAALGIP
SLRARIAKHYKEQHGFDLDPERVVVTNGSSGGFILAFLALFEAGDRVAIAAPGYPPYRHVLSALGCEPVLIETKAEDRFA
LTPETLRAAHAEKPLKGVLVASPANPTGTMMDRTALTALYAAAKELGLRFVSDEIYHGLDYAFPAVTAAEVAPDAVVINS
FSKYFCMTGWRVGWMVVPEGMSRTMERLQQNFSISVPTLSQIAAEAAFDGREEMDAVKHGYEENRRILTEGLPKIGLEHF
LPADGAFYLYADVSRFTGDSHAFATRLLDAAHVAATPGVDFDPFRGKQFLRFSYAGSAEDMRAAVARIGHFLSKE

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=320, Percent_Identity=25.9375, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI169881279, Length=320, Percent_Identity=25.9375, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI56713256, Length=376, Percent_Identity=23.4042553191489, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI56713254, Length=376, Percent_Identity=23.4042553191489, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4507369, Length=224, Percent_Identity=23.6607142857143, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI169881281, Length=243, Percent_Identity=22.6337448559671, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI19263340, Length=385, Percent_Identity=22.3376623376623, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI215599424, Length=394, Percent_Identity=23.8578680203046, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1788722, Length=385, Percent_Identity=26.7532467532467, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1786816, Length=393, Percent_Identity=27.2264631043257, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788627, Length=402, Percent_Identity=25.8706467661692, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1790797, Length=347, Percent_Identity=22.478386167147, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787710, Length=334, Percent_Identity=25.4491017964072, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17567369, Length=340, Percent_Identity=25.2941176470588, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994476, Length=295, Percent_Identity=27.1186440677966, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17567663, Length=381, Percent_Identity=23.6220472440945, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994472, Length=295, Percent_Identity=27.1186440677966, Blast_Score=89, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6322401, Length=394, Percent_Identity=23.8578680203046, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI18859735, Length=383, Percent_Identity=23.7597911227154, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28573069, Length=354, Percent_Identity=21.4689265536723, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24646114, Length=354, Percent_Identity=21.4689265536723, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28573067, Length=354, Percent_Identity=21.4689265536723, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28573065, Length=354, Percent_Identity=21.4689265536723, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42720; Mature: 42720

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSSLVLPPALVPASRRSEVAPFIVMDVMEHAARLEAEGAKVIHMEVGQPAAPAPRTARK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHH
AAAAALERGQVGYTAALGIPSLRARIAKHYKEQHGFDLDPERVVVTNGSSGGFILAFLAL
HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHH
FEAGDRVAIAAPGYPPYRHVLSALGCEPVLIETKAEDRFALTPETLRAAHAEKPLKGVLV
HCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCEEECHHHHHHHHHCCCCCEEEE
ASPANPTGTMMDRTALTALYAAAKELGLRFVSDEIYHGLDYAFPAVTAAEVAPDAVVINS
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHH
FSKYFCMTGWRVGWMVVPEGMSRTMERLQQNFSISVPTLSQIAAEAAFDGREEMDAVKHG
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCC
YEENRRILTEGLPKIGLEHFLPADGAFYLYADVSRFTGDSHAFATRLLDAAHVAATPGVD
HHHCCHHHHHCCCHHCHHHCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCC
FDPFRGKQFLRFSYAGSAEDMRAAVARIGHFLSKE
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSSLVLPPALVPASRRSEVAPFIVMDVMEHAARLEAEGAKVIHMEVGQPAAPAPRTARK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHH
AAAAALERGQVGYTAALGIPSLRARIAKHYKEQHGFDLDPERVVVTNGSSGGFILAFLAL
HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHH
FEAGDRVAIAAPGYPPYRHVLSALGCEPVLIETKAEDRFALTPETLRAAHAEKPLKGVLV
HCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCEEECHHHHHHHHHCCCCCEEEE
ASPANPTGTMMDRTALTALYAAAKELGLRFVSDEIYHGLDYAFPAVTAAEVAPDAVVINS
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHH
FSKYFCMTGWRVGWMVVPEGMSRTMERLQQNFSISVPTLSQIAAEAAFDGREEMDAVKHG
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCC
YEENRRILTEGLPKIGLEHFLPADGAFYLYADVSRFTGDSHAFATRLLDAAHVAATPGVD
HHHCCHHHHHCCCHHCHHHCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCCC
FDPFRGKQFLRFSYAGSAEDMRAAVARIGHFLSKE
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]