| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is yjgR [H]
Identifier: 158424683
GI number: 158424683
Start: 3497496
End: 3499169
Strand: Reverse
Name: yjgR [H]
Synonym: AZC_3059
Alternate gene names: 158424683
Gene position: 3499169-3497496 (Counterclockwise)
Preceding gene: 158424685
Following gene: 158424682
Centisome position: 65.16
GC content: 68.28
Gene sequence:
>1674_bases TTGCCTGAGCCGGCAGAACAGGGGCAAGACGGTGCGTCAGGCGGGTGCGCACCCGTGGCCTTGTGCCCGGCGCGACGCTA TGGGTGTGAGGTCAAGGGAGGAGCGGCCATGGCACGGGACGAGGGCACGGTCTTTGTCGGACACAGCCCGGCGGCGGGCA AGGACGAGGAACTGGCCCTGCGGCTCGCCAACCGGCACGGGCTCGTCACCGGTGCCACGGGCACGGGCAAGACCGTGACC CTCCAAGTGCTGGCGGAAGGCTTTGCCCGCGCCGGCGTACCGGTCTTTGCCGCCGACGTGAAAGGCGACCTCTCGGGCAT CGCGATGCCGGGAGAGCCAAAGGACTTCCTGCTGAAGCGGGCGCAGGAGGTGGGGATCACCTACACGCCCGACAGCTTCC CGGTGATCTTTTGGGATCTGTTCGGCGAGAAGGGCCATTCCGTCCGCACCACCATCTCCGAGATGGGGCCGCTGCTGCTG GCCCAGCTCATGGAGCTGAACGAGGTGCAGGAAGGCGTCCTCAACATCGCCTTCCGTCTCGCCGATGAACGCGGCCTCTG GCTCTATGACCTCAAGGACCTGCGTGCCGTCATCGGCTTCGTCGCCGATAATGCCAAGACGCTGACGCGCGACTATGGCA ACGTTTCCGCCGCCACCGTCGGCGCGATCCAGCGCCAGCTGCTGGTGCTGGAGAATCAGGGCGCCGACCGTTTCTTCGGC AAGCCCGACCTCAAGATTTCCGATCTCATGCGGGTGGACCGCTCCGGCTACGGCACCATTTCCGTGCTTGCTGCGGACAA GCTCATGGGGAGCCCGCGCCTCTACGCCACCTTCCTGCTGTGGCTGCTTTCCGAACTGTTCGAGGACCTGCCCGAGGTGG GCGATCTCGACAAGCCCAAGCTCGTCTTCTTCTTCGACGAGGCGCACCTATTGTTCGATGCCGCGCCCAAGGCGCTGCTG GAGAAGGTGGAACAGGTGGTCCGCCTCATCCGCTCCAAGGGCGTGGGCGTCTATTTCGTGACGCAGAACCCGCTGGACGT GCCGGACAGCGTGCTCGCCCAGCTCGGCAACCGCGTGCAGCACGCGCTGCGGGCCTTCACGCCGCGGGACCAGAAGGCGG TCCGAGCGGCGGCGGAAACCTTCCGCCCCAATCCGAAGCTCGACACGGCCCGGGTCATCACCGAACTCGGCAAGGGCGAG GCGCTGGTCTCCGTGCTGGAGGGCGCCGGCACGCCGACCATGGTGGAGCGCACCCTGATCGCCCCGCCGAGCGCGCGGGT GGGCGCCATCACCGATGCGGAGCGGGCGGAGGTGATCGCCCGCAGCCCTGTGCGAGGGCTTTATGACGTGACCGAAGACC CCCGGTCCGCCTTCGAGATGCTGCGCGAGGAGGCGGAGCCGGCGGCGCAGACCTCCGGACCGGTAACAGATGCGCCGTCC GGCCCCTGGGGCCATGTGCCGCGCGAGCACGCCCCGGACAGCCGGCCCGAGCCCACGGACCGTTCGGCTGGACGATCGCC GGGCGGCGTCCCGCGCGTGCCCCGGACGGGCTCCGCGCGCATGACCACGACGGAGCTGGTTGTAAGAACGGTGGCGCGCT CGCTGGCGTCGCAAGTGGGTAACCAACTCGGAAAAGCCATATTGCGGGGCATTCTCGGCGGCCGAAGCCGCTGA
Upstream 100 bases:
>100_bases ATGAGGCGGTCGGTGAGGGGCTCCATGAAGGTCTCTTCTGCCGTCTCTGGGAGCGGCATGGTGACGGTGAAGACCGGGCC TTGCAAGCGTGGCCGGGGCC
Downstream 100 bases:
>100_bases CCGGATTCGGGGGTCTGTTCGTCAGCGGGTTGATTGGCCGAACGACCCCCGGTATGATTTTCCCAAAGTCGGATGAGATT GCGGGGTCTCTTTCGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MPEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELALRLANRHGLVTGATGTGKTVT LQVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKRAQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLL AQLMELNEVQEGVLNIAFRLADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFG KPDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPKLVFFFDEAHLLFDAAPKALL EKVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQHALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGE ALVSVLEGAGTPTMVERTLIAPPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPS GPWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVGNQLGKAILRGILGGRSR
Sequences:
>Translated_557_residues MPEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELALRLANRHGLVTGATGTGKTVT LQVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKRAQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLL AQLMELNEVQEGVLNIAFRLADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFG KPDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPKLVFFFDEAHLLFDAAPKALL EKVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQHALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGE ALVSVLEGAGTPTMVERTLIAPPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPS GPWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVGNQLGKAILRGILGGRSR >Mature_556_residues PEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELALRLANRHGLVTGATGTGKTVTL QVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKRAQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLLA QLMELNEVQEGVLNIAFRLADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFGK PDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPKLVFFFDEAHLLFDAAPKALLE KVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQHALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGEA LVSVLEGAGTPTMVERTLIAPPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPSG PWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVGNQLGKAILRGILGGRSR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=506, Percent_Identity=53.7549407114625, Blast_Score=509, Evalue=1e-145,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 59724; Mature: 59593
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELAL CCCCCCCCCCCCCCCCCHHEECCHHHCCCCCCCCCEEECCCCEEEEECCCCCCCCHHHHH RLANRHGLVTGATGTGKTVTLQVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKR HHHCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHH AQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLLAQLMELNEVQEGVLNIAFRL HHHCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFG HCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCC KPDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPK CCCCCHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVFFFDEAHLLFDAAPKALLEKVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQ EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHH HALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGEALVSVLEGAGTPTMVERTLI HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHEEE APPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPS CCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCC GPWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH NQLGKAILRGILGGRSR HHHHHHHHHHHHCCCCC >Mature Secondary Structure PEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELAL CCCCCCCCCCCCCCCCHHEECCHHHCCCCCCCCCEEECCCCEEEEECCCCCCCCHHHHH RLANRHGLVTGATGTGKTVTLQVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKR HHHCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHH AQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLLAQLMELNEVQEGVLNIAFRL HHHCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFG HCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCC KPDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPK CCCCCHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVFFFDEAHLLFDAAPKALLEKVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQ EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHH HALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGEALVSVLEGAGTPTMVERTLI HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHEEE APPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPS CCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCC GPWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH NQLGKAILRGILGGRSR HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]