Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is yjgR [H]

Identifier: 158424683

GI number: 158424683

Start: 3497496

End: 3499169

Strand: Reverse

Name: yjgR [H]

Synonym: AZC_3059

Alternate gene names: 158424683

Gene position: 3499169-3497496 (Counterclockwise)

Preceding gene: 158424685

Following gene: 158424682

Centisome position: 65.16

GC content: 68.28

Gene sequence:

>1674_bases
TTGCCTGAGCCGGCAGAACAGGGGCAAGACGGTGCGTCAGGCGGGTGCGCACCCGTGGCCTTGTGCCCGGCGCGACGCTA
TGGGTGTGAGGTCAAGGGAGGAGCGGCCATGGCACGGGACGAGGGCACGGTCTTTGTCGGACACAGCCCGGCGGCGGGCA
AGGACGAGGAACTGGCCCTGCGGCTCGCCAACCGGCACGGGCTCGTCACCGGTGCCACGGGCACGGGCAAGACCGTGACC
CTCCAAGTGCTGGCGGAAGGCTTTGCCCGCGCCGGCGTACCGGTCTTTGCCGCCGACGTGAAAGGCGACCTCTCGGGCAT
CGCGATGCCGGGAGAGCCAAAGGACTTCCTGCTGAAGCGGGCGCAGGAGGTGGGGATCACCTACACGCCCGACAGCTTCC
CGGTGATCTTTTGGGATCTGTTCGGCGAGAAGGGCCATTCCGTCCGCACCACCATCTCCGAGATGGGGCCGCTGCTGCTG
GCCCAGCTCATGGAGCTGAACGAGGTGCAGGAAGGCGTCCTCAACATCGCCTTCCGTCTCGCCGATGAACGCGGCCTCTG
GCTCTATGACCTCAAGGACCTGCGTGCCGTCATCGGCTTCGTCGCCGATAATGCCAAGACGCTGACGCGCGACTATGGCA
ACGTTTCCGCCGCCACCGTCGGCGCGATCCAGCGCCAGCTGCTGGTGCTGGAGAATCAGGGCGCCGACCGTTTCTTCGGC
AAGCCCGACCTCAAGATTTCCGATCTCATGCGGGTGGACCGCTCCGGCTACGGCACCATTTCCGTGCTTGCTGCGGACAA
GCTCATGGGGAGCCCGCGCCTCTACGCCACCTTCCTGCTGTGGCTGCTTTCCGAACTGTTCGAGGACCTGCCCGAGGTGG
GCGATCTCGACAAGCCCAAGCTCGTCTTCTTCTTCGACGAGGCGCACCTATTGTTCGATGCCGCGCCCAAGGCGCTGCTG
GAGAAGGTGGAACAGGTGGTCCGCCTCATCCGCTCCAAGGGCGTGGGCGTCTATTTCGTGACGCAGAACCCGCTGGACGT
GCCGGACAGCGTGCTCGCCCAGCTCGGCAACCGCGTGCAGCACGCGCTGCGGGCCTTCACGCCGCGGGACCAGAAGGCGG
TCCGAGCGGCGGCGGAAACCTTCCGCCCCAATCCGAAGCTCGACACGGCCCGGGTCATCACCGAACTCGGCAAGGGCGAG
GCGCTGGTCTCCGTGCTGGAGGGCGCCGGCACGCCGACCATGGTGGAGCGCACCCTGATCGCCCCGCCGAGCGCGCGGGT
GGGCGCCATCACCGATGCGGAGCGGGCGGAGGTGATCGCCCGCAGCCCTGTGCGAGGGCTTTATGACGTGACCGAAGACC
CCCGGTCCGCCTTCGAGATGCTGCGCGAGGAGGCGGAGCCGGCGGCGCAGACCTCCGGACCGGTAACAGATGCGCCGTCC
GGCCCCTGGGGCCATGTGCCGCGCGAGCACGCCCCGGACAGCCGGCCCGAGCCCACGGACCGTTCGGCTGGACGATCGCC
GGGCGGCGTCCCGCGCGTGCCCCGGACGGGCTCCGCGCGCATGACCACGACGGAGCTGGTTGTAAGAACGGTGGCGCGCT
CGCTGGCGTCGCAAGTGGGTAACCAACTCGGAAAAGCCATATTGCGGGGCATTCTCGGCGGCCGAAGCCGCTGA

Upstream 100 bases:

>100_bases
ATGAGGCGGTCGGTGAGGGGCTCCATGAAGGTCTCTTCTGCCGTCTCTGGGAGCGGCATGGTGACGGTGAAGACCGGGCC
TTGCAAGCGTGGCCGGGGCC

Downstream 100 bases:

>100_bases
CCGGATTCGGGGGTCTGTTCGTCAGCGGGTTGATTGGCCGAACGACCCCCGGTATGATTTTCCCAAAGTCGGATGAGATT
GCGGGGTCTCTTTCGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MPEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELALRLANRHGLVTGATGTGKTVT
LQVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKRAQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLL
AQLMELNEVQEGVLNIAFRLADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFG
KPDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPKLVFFFDEAHLLFDAAPKALL
EKVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQHALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGE
ALVSVLEGAGTPTMVERTLIAPPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPS
GPWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVGNQLGKAILRGILGGRSR

Sequences:

>Translated_557_residues
MPEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELALRLANRHGLVTGATGTGKTVT
LQVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKRAQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLL
AQLMELNEVQEGVLNIAFRLADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFG
KPDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPKLVFFFDEAHLLFDAAPKALL
EKVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQHALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGE
ALVSVLEGAGTPTMVERTLIAPPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPS
GPWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVGNQLGKAILRGILGGRSR
>Mature_556_residues
PEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELALRLANRHGLVTGATGTGKTVTL
QVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKRAQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLLA
QLMELNEVQEGVLNIAFRLADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFGK
PDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPKLVFFFDEAHLLFDAAPKALLE
KVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQHALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGEA
LVSVLEGAGTPTMVERTLIAPPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPSG
PWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVGNQLGKAILRGILGGRSR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=506, Percent_Identity=53.7549407114625, Blast_Score=509, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 59724; Mature: 59593

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELAL
CCCCCCCCCCCCCCCCCHHEECCHHHCCCCCCCCCEEECCCCEEEEECCCCCCCCHHHHH
RLANRHGLVTGATGTGKTVTLQVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKR
HHHCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLLAQLMELNEVQEGVLNIAFRL
HHHCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFG
HCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCC
KPDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPK
CCCCCHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
LVFFFDEAHLLFDAAPKALLEKVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQ
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHH
HALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGEALVSVLEGAGTPTMVERTLI
HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHEEE
APPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPS
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCC
GPWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NQLGKAILRGILGGRSR
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PEPAEQGQDGASGGCAPVALCPARRYGCEVKGGAAMARDEGTVFVGHSPAAGKDEELAL
CCCCCCCCCCCCCCCCHHEECCHHHCCCCCCCCCEEECCCCEEEEECCCCCCCCHHHHH
RLANRHGLVTGATGTGKTVTLQVLAEGFARAGVPVFAADVKGDLSGIAMPGEPKDFLLKR
HHHCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AQEVGITYTPDSFPVIFWDLFGEKGHSVRTTISEMGPLLLAQLMELNEVQEGVLNIAFRL
HHHCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADERGLWLYDLKDLRAVIGFVADNAKTLTRDYGNVSAATVGAIQRQLLVLENQGADRFFG
HCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCCCCC
KPDLKISDLMRVDRSGYGTISVLAADKLMGSPRLYATFLLWLLSELFEDLPEVGDLDKPK
CCCCCHHHHHHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCE
LVFFFDEAHLLFDAAPKALLEKVEQVVRLIRSKGVGVYFVTQNPLDVPDSVLAQLGNRVQ
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHH
HALRAFTPRDQKAVRAAAETFRPNPKLDTARVITELGKGEALVSVLEGAGTPTMVERTLI
HHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHEEE
APPSARVGAITDAERAEVIARSPVRGLYDVTEDPRSAFEMLREEAEPAAQTSGPVTDAPS
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCC
GPWGHVPREHAPDSRPEPTDRSAGRSPGGVPRVPRTGSARMTTTELVVRTVARSLASQVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NQLGKAILRGILGGRSR
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]