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The map label for this gene is glxA [H]

Identifier: 158424673

GI number: 158424673

Start: 3484550

End: 3485791

Strand: Reverse

Name: glxA [H]

Synonym: AZC_3049

Alternate gene names: 158424673

Gene position: 3485791-3484550 (Counterclockwise)

Preceding gene: 158424676

Following gene: 158424662

Centisome position: 64.92

GC content: 69.32

Gene sequence:

>1242_bases
ATGCCGCTTCTGGGGATGAGGCAGCATGCCTCACCCGCGCGCTTGCATCTCGGCCAACTGCGCCTAGCATCTGGAACAAA
TGCGACATCCTGTTCCGATGCTCCCTTCCCACTTCCAGCCGTTCGATGGTCTTCGCGAGTGCCGTTCCATTGCGCGGGCT
GGCGGGACGGCCCTGCCGGAGCGGCACCCATGAGCCTCGCACCGCATTCCGTCCCGTCCCGTACCGCCTCCGGCGCCAAG
CTTCGCGTCGGCTTCCTGCCGCTGCACAACTTCACCTTGACCGCCTTTTCGAGCTTCCTCGACGTGCTGCGTCTCGCCGG
CGACGAGGGCGACCGCTCCCGGCCCATCGCTTGTTCCTGGGCGGTGATGGCGCCCGGACGCCGCCCGGTGCGGGCCTCCT
GCGGCATCGAAATCCAGCCGAGCGCGGATCTCTCCGATCCCAAGGGCTTCGATTATATGGTGGTGGTCGGCGGACTTCTC
CACGGCATGCCGCCGCTTGCACCTGCGCTCGCCACCTATCTCCAGCAGGCGGCGCAGGCGGGCGTGCCGCTCATCGGCGT
ATGCACCGGCTCCTTCGTGCTCTGCCGCCTCGGCCTCATGGCCCAGCGCAAATGCTGCGTGAGCTGGTACCACTACCGCG
ACTTCCTGGAGGAATTTCCTGCCCTCGTGCCGGTGGCCGACCGCCTGTTCGTCATCGACCGCGACCGCATCACATGCTCG
GGCGGGGCGGGGGTGGCGGACCTTGCCGCCCATCTGGTTGCCGCCCATCTCGGCGCGGCAACGGCCCAGAAGGCGCTCAA
TATCCTGCTCATCGACAGGCCGCGCACGCCGGAGAGTGCCCAGCCCGCCCCGCCCGTGGGCGAAGGCTCGGGTGCCGACG
ATCGCGTATCCCGCGCCCTACTGCTGATGGAGCAGAATCTCGCCGAGCCCTTGAGTGTCGCGGAAATCGCCCGCCGGCTG
GCGGTGAGCCCGCGCCAGCTCGAGCGGCTGTTCGCCGAGCGCCTCGCGGAAACGCCGCAGGAGAGCTATCTGGCCCTGCG
CTTGCGTCACGGCCGCTGGATGCTCGCCAACACCGTCTTTTCGGCGGCGCAGATCGCGGCGGAGCTGGGCTTTGCGGACG
GCTCGCACTTTGGCCGCGCCTTCAAGGGGCGGTTCGGGGAGACGCCCGCCGCCTTCCGCAAGGCCGCCGTGCCGGCGGGC
CGCAAGGGCGCGCGCGAGCCGCTGCCACGCATCTACGACTGA

Upstream 100 bases:

>100_bases
CCTCTCCTTCATTCTGCAGGGCCGCACACGGTTTAAGCGGGGCGAACCGGGCAGCCATAGGGCAGGCGGTGCGCGCCTCC
ACCAGAAGCCGGGGATTGGC

Downstream 100 bases:

>100_bases
GCCGCGCCGGGCCTGTTTCCGACCTCGCGTCAGGCGGCCCGCGCCGTCCAGCGGCCGATGTCGAAGGGCTCAAGCGGCAC
GTCGGTGCGCCCGTCGAGCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MPLLGMRQHASPARLHLGQLRLASGTNATSCSDAPFPLPAVRWSSRVPFHCAGWRDGPAGAAPMSLAPHSVPSRTASGAK
LRVGFLPLHNFTLTAFSSFLDVLRLAGDEGDRSRPIACSWAVMAPGRRPVRASCGIEIQPSADLSDPKGFDYMVVVGGLL
HGMPPLAPALATYLQQAAQAGVPLIGVCTGSFVLCRLGLMAQRKCCVSWYHYRDFLEEFPALVPVADRLFVIDRDRITCS
GGAGVADLAAHLVAAHLGAATAQKALNILLIDRPRTPESAQPAPPVGEGSGADDRVSRALLLMEQNLAEPLSVAEIARRL
AVSPRQLERLFAERLAETPQESYLALRLRHGRWMLANTVFSAAQIAAELGFADGSHFGRAFKGRFGETPAAFRKAAVPAG
RKGAREPLPRIYD

Sequences:

>Translated_413_residues
MPLLGMRQHASPARLHLGQLRLASGTNATSCSDAPFPLPAVRWSSRVPFHCAGWRDGPAGAAPMSLAPHSVPSRTASGAK
LRVGFLPLHNFTLTAFSSFLDVLRLAGDEGDRSRPIACSWAVMAPGRRPVRASCGIEIQPSADLSDPKGFDYMVVVGGLL
HGMPPLAPALATYLQQAAQAGVPLIGVCTGSFVLCRLGLMAQRKCCVSWYHYRDFLEEFPALVPVADRLFVIDRDRITCS
GGAGVADLAAHLVAAHLGAATAQKALNILLIDRPRTPESAQPAPPVGEGSGADDRVSRALLLMEQNLAEPLSVAEIARRL
AVSPRQLERLFAERLAETPQESYLALRLRHGRWMLANTVFSAAQIAAELGFADGSHFGRAFKGRFGETPAAFRKAAVPAG
RKGAREPLPRIYD
>Mature_412_residues
PLLGMRQHASPARLHLGQLRLASGTNATSCSDAPFPLPAVRWSSRVPFHCAGWRDGPAGAAPMSLAPHSVPSRTASGAKL
RVGFLPLHNFTLTAFSSFLDVLRLAGDEGDRSRPIACSWAVMAPGRRPVRASCGIEIQPSADLSDPKGFDYMVVVGGLLH
GMPPLAPALATYLQQAAQAGVPLIGVCTGSFVLCRLGLMAQRKCCVSWYHYRDFLEEFPALVPVADRLFVIDRDRITCSG
GAGVADLAAHLVAAHLGAATAQKALNILLIDRPRTPESAQPAPPVGEGSGADDRVSRALLLMEQNLAEPLSVAEIARRLA
VSPRQLERLFAERLAETPQESYLALRLRHGRWMLANTVFSAAQIAAELGFADGSHFGRAFKGRFGETPAAFRKAAVPAGR
KGAREPLPRIYD

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 44198; Mature: 44067

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLGMRQHASPARLHLGQLRLASGTNATSCSDAPFPLPAVRWSSRVPFHCAGWRDGPAG
CCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
AAPMSLAPHSVPSRTASGAKLRVGFLPLHNFTLTAFSSFLDVLRLAGDEGDRSRPIACSW
CCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
AVMAPGRRPVRASCGIEIQPSADLSDPKGFDYMVVVGGLLHGMPPLAPALATYLQQAAQA
EEECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GVPLIGVCTGSFVLCRLGLMAQRKCCVSWYHYRDFLEEFPALVPVADRLFVIDRDRITCS
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEC
GGAGVADLAAHLVAAHLGAATAQKALNILLIDRPRTPESAQPAPPVGEGSGADDRVSRAL
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
LLMEQNLAEPLSVAEIARRLAVSPRQLERLFAERLAETPQESYLALRLRHGRWMLANTVF
HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEEEECCCEEHHHHHH
SAAQIAAELGFADGSHFGRAFKGRFGETPAAFRKAAVPAGRKGAREPLPRIYD
HHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLLGMRQHASPARLHLGQLRLASGTNATSCSDAPFPLPAVRWSSRVPFHCAGWRDGPAG
CCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
AAPMSLAPHSVPSRTASGAKLRVGFLPLHNFTLTAFSSFLDVLRLAGDEGDRSRPIACSW
CCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
AVMAPGRRPVRASCGIEIQPSADLSDPKGFDYMVVVGGLLHGMPPLAPALATYLQQAAQA
EEECCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GVPLIGVCTGSFVLCRLGLMAQRKCCVSWYHYRDFLEEFPALVPVADRLFVIDRDRITCS
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEC
GGAGVADLAAHLVAAHLGAATAQKALNILLIDRPRTPESAQPAPPVGEGSGADDRVSRAL
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
LLMEQNLAEPLSVAEIARRLAVSPRQLERLFAERLAETPQESYLALRLRHGRWMLANTVF
HHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEEEEECCCEEHHHHHH
SAAQIAAELGFADGSHFGRAFKGRFGETPAAFRKAAVPAGRKGAREPLPRIYD
HHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]