BacMap

Definition	Azorhizobium caulinodans ORS 571, complete genome.
Accession	NC_009937
Length	5,369,772

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The map label for this gene is mas1 [H]

Identifier: 158424669

GI number: 158424669

Start: 3480493

End: 3481188

Strand: Direct

Name: mas1 [H]

Synonym: AZC_3045

Alternate gene names: 158424669

Gene position: 3480493-3481188 (Clockwise)

Preceding gene: 158424668

Following gene: 158424670

Centisome position: 64.82

GC content: 68.39

Gene sequence:

>696_bases
ATGCTTGACCCGAACGGCCGCGTCGCCCTCGTTTCCGGTGCCTCGCGCGGCATCGGCCGGGCCATCGCGGAGCGCCTTGC
CGCCAGCGGCTATGCGGTCTCCGCCGGTGTGCGCGATATCGCGCGGGCGAAGCTGCCGGGAGGCTTCCATGCCAGCCGCT
ATGACGCCGGAGATGCCGCGAGCGCGACGCGCTGGGTGGAGGAGGCGGTGACAGCCCTCGGGCGCATCGACGTTCTGGTG
AATGCCGCCGGCATCAATGCGCGCGGCCTGTTGCTCGACGCCGACGAAAGTGCCTTTTCCGCGCTCTGGGACATCAACAC
CTTAGGCCCGCTGCGGATGATCCGCGCGGCCTGGCCGCATCTCGTGGCTTCCGGCAACGGCCGGGTGATCAATGTCTCGT
CGCTCTCGGGCAAGAGGGTGCGCAATGAGAATGTGGGCTATGCCATGAGCAAGCACGCCCTCATCGCCCTCACCCATGGG
GTGCGCCAGCAAGGATGGGAGCACGGCATCCGCGCCACCGCGCTCTGCCCTGGCTTCGTGGACACGGACATGACCGCCGC
CGTCACCAAGGTGCCGCGCGAGGCCATGAGCCGGCCGGAGGACATCGCGGTACTGGTGGAGGCGCTGGTGCGCCTGCCCA
ATACGGCGAGCGTCGCCGAGCTTCTGGTGAACTGCCAGAAGGAGGACATGCTGTGA

Upstream 100 bases:

>100_bases
CGCGCGCTGCCGAGCTGCGCGGAAGAGGTGCCGCCGCTCGTGAGCGTCGGCGGCGGACGCGCCGTCGCCTGCCCGCCCGC
CCTGTCCGAGGGGACGAGCC

Downstream 100 bases:

>100_bases
GGCTGAAGCGCCTGCGCGATCTCGACCGCGCGCCCCTCGCCCTCACGCTGGATGGCCTCGCCGTCTCCGCCCTCGCGGGC
GACACGTTGCTCACCGCGCT

Product: short-chain dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLDPNGRVALVSGASRGIGRAIAERLAASGYAVSAGVRDIARAKLPGGFHASRYDAGDAASATRWVEEAVTALGRIDVLV
NAAGINARGLLLDADESAFSALWDINTLGPLRMIRAAWPHLVASGNGRVINVSSLSGKRVRNENVGYAMSKHALIALTHG
VRQQGWEHGIRATALCPGFVDTDMTAAVTKVPREAMSRPEDIAVLVEALVRLPNTASVAELLVNCQKEDML

Sequences:

>Translated_231_residues
MLDPNGRVALVSGASRGIGRAIAERLAASGYAVSAGVRDIARAKLPGGFHASRYDAGDAASATRWVEEAVTALGRIDVLV
NAAGINARGLLLDADESAFSALWDINTLGPLRMIRAAWPHLVASGNGRVINVSSLSGKRVRNENVGYAMSKHALIALTHG
VRQQGWEHGIRATALCPGFVDTDMTAAVTKVPREAMSRPEDIAVLVEALVRLPNTASVAELLVNCQKEDML
>Mature_231_residues
MLDPNGRVALVSGASRGIGRAIAERLAASGYAVSAGVRDIARAKLPGGFHASRYDAGDAASATRWVEEAVTALGRIDVLV
NAAGINARGLLLDADESAFSALWDINTLGPLRMIRAAWPHLVASGNGRVINVSSLSGKRVRNENVGYAMSKHALIALTHG
VRQQGWEHGIRATALCPGFVDTDMTAAVTKVPREAMSRPEDIAVLVEALVRLPNTASVAELLVNCQKEDML

Specific function: Reduces deoxy-fructosyl-glutamine to mannopine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=184, Percent_Identity=33.1521739130435, Blast_Score=94, Evalue=7e-20,
Organism=Homo sapiens, GI15277342, Length=228, Percent_Identity=32.8947368421053, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI7706318, Length=190, Percent_Identity=28.9473684210526, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI20149619, Length=198, Percent_Identity=24.7474747474747, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=28.3333333333333, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI31542939, Length=203, Percent_Identity=30.0492610837438, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI32483357, Length=223, Percent_Identity=32.2869955156951, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI66933014, Length=124, Percent_Identity=34.6774193548387, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI223718074, Length=205, Percent_Identity=31.7073170731707, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI4504505, Length=223, Percent_Identity=30.0448430493274, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI40807363, Length=196, Percent_Identity=25, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI210032110, Length=191, Percent_Identity=25.6544502617801, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI50726952, Length=187, Percent_Identity=31.5508021390374, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI7705925, Length=200, Percent_Identity=30.5, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87082100, Length=232, Percent_Identity=32.7586206896552, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1787335, Length=203, Percent_Identity=32.0197044334975, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1788459, Length=188, Percent_Identity=28.7234042553192, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790717, Length=198, Percent_Identity=28.2828282828283, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI87082160, Length=195, Percent_Identity=25.1282051282051, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787905, Length=222, Percent_Identity=24.7747747747748, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1789208, Length=192, Percent_Identity=28.125, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786812, Length=185, Percent_Identity=27.5675675675676, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=188, Percent_Identity=34.0425531914894, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17560676, Length=188, Percent_Identity=30.3191489361702, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=191, Percent_Identity=30.8900523560209, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=32.1243523316062, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17508895, Length=200, Percent_Identity=24, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=242, Percent_Identity=28.099173553719, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=234, Percent_Identity=29.4871794871795, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=236, Percent_Identity=30.0847457627119, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17568967, Length=189, Percent_Identity=29.1005291005291, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=234, Percent_Identity=26.0683760683761, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17555706, Length=215, Percent_Identity=29.7674418604651, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=215, Percent_Identity=29.3023255813954, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=199, Percent_Identity=27.1356783919598, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=204, Percent_Identity=30.8823529411765, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=214, Percent_Identity=31.3084112149533, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=239, Percent_Identity=29.2887029288703, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=194, Percent_Identity=31.4432989690722, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=227, Percent_Identity=26.8722466960352, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17558628, Length=189, Percent_Identity=29.6296296296296, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=198, Percent_Identity=26.2626262626263, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=218, Percent_Identity=27.5229357798165, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI23397609, Length=182, Percent_Identity=36.8131868131868, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24641232, Length=246, Percent_Identity=32.1138211382114, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21355319, Length=225, Percent_Identity=30.6666666666667, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI116007234, Length=241, Percent_Identity=30.7053941908714, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24639444, Length=231, Percent_Identity=29.004329004329, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24641388, Length=242, Percent_Identity=31.8181818181818, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24648944, Length=240, Percent_Identity=29.5833333333333, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI116007236, Length=237, Percent_Identity=27.8481012658228, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24648693, Length=246, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355889, Length=246, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI18859837, Length=189, Percent_Identity=30.1587301587302, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281364494, Length=244, Percent_Identity=28.2786885245902, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=23.5897435897436, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28571387, Length=242, Percent_Identity=30.1652892561983, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI116007232, Length=190, Percent_Identity=32.1052631578947, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357673, Length=189, Percent_Identity=27.5132275132275, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24656154, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19922628, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24663911, Length=247, Percent_Identity=28.3400809716599, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24644339, Length=191, Percent_Identity=27.7486910994764, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR013078
- InterPro:   IPR015845
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short; PF00300 PGAM [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24385; Mature: 24385

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDPNGRVALVSGASRGIGRAIAERLAASGYAVSAGVRDIARAKLPGGFHASRYDAGDAA
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHH
SATRWVEEAVTALGRIDVLVNAAGINARGLLLDADESAFSALWDINTLGPLRMIRAAWPH
HHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHH
LVASGNGRVINVSSLSGKRVRNENVGYAMSKHALIALTHGVRQQGWEHGIRATALCPGFV
EEECCCCCEEEEECCCCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHCCEEEEECCCCC
DTDMTAAVTKVPREAMSRPEDIAVLVEALVRLPNTASVAELLVNCQKEDML
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDPNGRVALVSGASRGIGRAIAERLAASGYAVSAGVRDIARAKLPGGFHASRYDAGDAA
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHH
SATRWVEEAVTALGRIDVLVNAAGINARGLLLDADESAFSALWDINTLGPLRMIRAAWPH
HHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHH
LVASGNGRVINVSSLSGKRVRNENVGYAMSKHALIALTHGVRQQGWEHGIRATALCPGFV
EEECCCCCEEEEECCCCCCCCCCCCCEEECCCEEEEEHHHHHHHHHHHCCEEEEECCCCC
DTDMTAAVTKVPREAMSRPEDIAVLVEALVRLPNTASVAELLVNCQKEDML
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909028 [H]