| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424648
Identifier: 158424648
GI number: 158424648
Start: 3456791
End: 3457807
Strand: Direct
Name: 158424648
Synonym: AZC_3024
Alternate gene names: NA
Gene position: 3456791-3457807 (Clockwise)
Preceding gene: 158424645
Following gene: 158424649
Centisome position: 64.38
GC content: 70.6
Gene sequence:
>1017_bases ATGCCCCGCAATCCCTATCACTCCGGCCCGCAGACGTCGCATTTCGACGGCCTGCGCTTCTTCAATCCGGATCATCCGCC CACCGACCGCGCCCTGCGCGAGATCCTGCGCTGGAAGATGAAGGGCCGCGCCACGCCGTGGACGCCCGCCCCCAACCGCC CGCAGGCGATCCCCGAGGCGCGGGTGCCGGACCTCAGCGTGACCATCGTCGGCCACGCCACGGCGCTGATCCAGATCGAG GGGCTGAATATCCTGACCGACCCCGTCTGGTCGGAACGTGCGAGCCCCTTCTCCTTCGCCGGACCGAGGCGCGCCTGCCC GCCCGGCATCGCCTTCGCGCACCTGCCGCCCATCGACATCGTGCTGCTCAGCCACAACCATTACGACCACATGGATCTGG CCACGCTGCGCGCCCTCCAGACCCGCGACCGGCCGCTGATCGTGACGCCGCTCGGCAACGACGCCATCGTGCGGCGGGCG GTGCCGGACGCGCGCTTCCAGACCGGCGACTGGTGGGACGTCGTCGTGCTTGCCGGCGGGATCGAGATCACCTTCCTGCC GGCGCAGCACTGGTCCGCCCGCACGGGACGCGACCGGCGCATGGCGCTGTGGAGCGGCTTCATGGTCCGCACCGGCAGCC GCCTCGTCTATTTCGCCGGCGACACCGCTTACGGCAACGGCCGCATCTTCCGCGAGATGCGCACGCGCATGGGCCGGCCG GACATGGCGCTGATCCCCATCGGCGCCTACGAGCCGCGCTGGTTCATGAAGGCGCAGCATGCGGATGCCCGCGAGGCCGT GCAGATCATGGAGGATCTGGAGGCCGAGCAGGCGGTGGGCATCCATTGGGGCGTCTTCCGCCTGACCGACGAGGGGCGCG AGGAGCCTCCCGCGATGCTGGCGGCGAGCCTGGAGGCACGTGGCATCGCCGCAGCCCGCTTTCCGGCCGGCGAACCGGGC GCGAGCTATGGCATGGGCGGGGTTCGCCCGAACCTCGTCCTCTCCTGCACCGAATAA
Upstream 100 bases:
>100_bases CACTGCCCCAGCGGCAACGGAGCGACGGCATCAGGCCCGCTCCGCAGGTCGCCCGCGTGTGATTGGCCCCGGCCCTCGTG GAGGGCTATGAGAGGCATCC
Downstream 100 bases:
>100_bases CACCTCAGAGCGCTGATTTGGCACCGTCCTGCGGCGGATGCGCCCATGGTTGTGCACGCCCCGCAGGACGCTGGGGCAGA GCTGTTTTGAAGCCGGTGCA
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPRNPYHSGPQTSHFDGLRFFNPDHPPTDRALREILRWKMKGRATPWTPAPNRPQAIPEARVPDLSVTIVGHATALIQIE GLNILTDPVWSERASPFSFAGPRRACPPGIAFAHLPPIDIVLLSHNHYDHMDLATLRALQTRDRPLIVTPLGNDAIVRRA VPDARFQTGDWWDVVVLAGGIEITFLPAQHWSARTGRDRRMALWSGFMVRTGSRLVYFAGDTAYGNGRIFREMRTRMGRP DMALIPIGAYEPRWFMKAQHADAREAVQIMEDLEAEQAVGIHWGVFRLTDEGREEPPAMLAASLEARGIAAARFPAGEPG ASYGMGGVRPNLVLSCTE
Sequences:
>Translated_338_residues MPRNPYHSGPQTSHFDGLRFFNPDHPPTDRALREILRWKMKGRATPWTPAPNRPQAIPEARVPDLSVTIVGHATALIQIE GLNILTDPVWSERASPFSFAGPRRACPPGIAFAHLPPIDIVLLSHNHYDHMDLATLRALQTRDRPLIVTPLGNDAIVRRA VPDARFQTGDWWDVVVLAGGIEITFLPAQHWSARTGRDRRMALWSGFMVRTGSRLVYFAGDTAYGNGRIFREMRTRMGRP DMALIPIGAYEPRWFMKAQHADAREAVQIMEDLEAEQAVGIHWGVFRLTDEGREEPPAMLAASLEARGIAAARFPAGEPG ASYGMGGVRPNLVLSCTE >Mature_337_residues PRNPYHSGPQTSHFDGLRFFNPDHPPTDRALREILRWKMKGRATPWTPAPNRPQAIPEARVPDLSVTIVGHATALIQIEG LNILTDPVWSERASPFSFAGPRRACPPGIAFAHLPPIDIVLLSHNHYDHMDLATLRALQTRDRPLIVTPLGNDAIVRRAV PDARFQTGDWWDVVVLAGGIEITFLPAQHWSARTGRDRRMALWSGFMVRTGSRLVYFAGDTAYGNGRIFREMRTRMGRPD MALIPIGAYEPRWFMKAQHADAREAVQIMEDLEAEQAVGIHWGVFRLTDEGREEPPAMLAASLEARGIAAARFPAGEPGA SYGMGGVRPNLVLSCTE
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To K.pneumoniae romA [H]
Homologues:
Organism=Homo sapiens, GI170932483, Length=333, Percent_Identity=36.6366366366366, Blast_Score=197, Evalue=8e-51, Organism=Homo sapiens, GI170932481, Length=333, Percent_Identity=36.6366366366366, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17543102, Length=255, Percent_Identity=38.4313725490196, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17543100, Length=255, Percent_Identity=38.4313725490196, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI25148824, Length=255, Percent_Identity=38.4313725490196, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17543104, Length=253, Percent_Identity=38.7351778656126, Blast_Score=165, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6325154, Length=264, Percent_Identity=32.9545454545455, Blast_Score=143, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37601; Mature: 37470
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNPYHSGPQTSHFDGLRFFNPDHPPTDRALREILRWKMKGRATPWTPAPNRPQAIPEA CCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RVPDLSVTIVGHATALIQIEGLNILTDPVWSERASPFSFAGPRRACPPGIAFAHLPPIDI CCCCEEEEEEECEEEEEEECCCEEEECCCHHCCCCCCCCCCCCCCCCCCCEEECCCCEEE VLLSHNHYDHMDLATLRALQTRDRPLIVTPLGNDAIVRRAVPDARFQTGDWWDVVVLAGG EEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECC IEITFLPAQHWSARTGRDRRMALWSGFMVRTGSRLVYFAGDTAYGNGRIFREMRTRMGRP EEEEEEECCCCCCCCCCCCEEEEHHCEEEECCCEEEEEECCEECCCCCHHHHHHHHCCCC DMALIPIGAYEPRWFMKAQHADAREAVQIMEDLEAEQAVGIHWGVFRLTDEGREEPPAML CEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHH AASLEARGIAAARFPAGEPGASYGMGGVRPNLVLSCTE HHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure PRNPYHSGPQTSHFDGLRFFNPDHPPTDRALREILRWKMKGRATPWTPAPNRPQAIPEA CCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RVPDLSVTIVGHATALIQIEGLNILTDPVWSERASPFSFAGPRRACPPGIAFAHLPPIDI CCCCEEEEEEECEEEEEEECCCEEEECCCHHCCCCCCCCCCCCCCCCCCCEEECCCCEEE VLLSHNHYDHMDLATLRALQTRDRPLIVTPLGNDAIVRRAVPDARFQTGDWWDVVVLAGG EEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECC IEITFLPAQHWSARTGRDRRMALWSGFMVRTGSRLVYFAGDTAYGNGRIFREMRTRMGRP EEEEEEECCCCCCCCCCCCEEEEHHCEEEECCCEEEEEECCEECCCCCHHHHHHHHCCCC DMALIPIGAYEPRWFMKAQHADAREAVQIMEDLEAEQAVGIHWGVFRLTDEGREEPPAML CEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCHHHH AASLEARGIAAARFPAGEPGASYGMGGVRPNLVLSCTE HHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]