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The map label for this gene is 158424630

Identifier: 158424630

GI number: 158424630

Start: 3436708

End: 3438126

Strand: Reverse

Name: 158424630

Synonym: AZC_3006

Alternate gene names: NA

Gene position: 3438126-3436708 (Counterclockwise)

Preceding gene: 158424631

Following gene: 158424628

Centisome position: 64.03

GC content: 70.26

Gene sequence:

>1419_bases
ATGATCCATGTGCGACTGGAGTGCGAGACGGATTTCGCCGGCTGGCGGCAGGCGGCGCGGCGCCTCATCGGCGGCGGCAT
CGCGCCCCGCGATGTGATGTGGAGCGTCGGCGGGGCGGCGGACCTGTTCGGCGCGGGCGCCCCGCTCCCCGATGACACGC
CTGCCGCCCAGTTCACCGTGCCCCGCGGCTTCCTGCGGCTGGCGGAAACCGCCTTCCTGCACCGGGACCGCGAGCGCTTC
GGGCTGCTCTATCGCCTGCTGGCGCGCCTGCGGGCTGAACCTGGCCTGCTCTCCATCGCCATGGACAGCGATGTGGCGCG
GGTGGAGGGCATGGCGAAATCCGTGCGGCGCGACATTCACAAGATGCGCGCCTTCGTCCGCTTCCGGCAGGTGGAGGTAG
CGGGGGCGGAGTGGTTCGTCGCATGGTTCGAGCCCGAGCATCACATTCTGGAAGCCAACGCCCCCTTCTTCCAGCGGCGT
TTCGCCGGCATGAAATGGTCGATCCTGACGCCGGAGGCGAGCGCCCATTGGGATGGCGAAACGCTCACCTTCGGTCCCGG
CGGCACGCGGGCCGAGGCGCCGGCGGACGATGCCATGGAGACGCTGTGGCGGGATTATTACGCCAGCATCTTCAATCCGG
CCCGGCTGAAGATCAGCGCCATGAAGTCCGAAATGCCGGTGAAATACTGGCGCAACCTGCCGGAGGCCGCGCTGATCGCC
CCTCTCATCGCCGATGCCGAGCGCCGGGCGGGCGAGATGATTGCCCATGCTGCGACCCCCGCCAATCCGCGCCCCCACCG
CCTCGAAAAGGCGGCCCTCGATGCGGAGCAAGCCGATGGTCTTGAGGCGTTAAGGGCGCAAGCGCTCGGCTGCCGGGCCT
GCCCGCTCTGGGCGCCGGCGACGCAGACGGTCTTCGGCGAGGGGCCGACCGATGCGCCGGTGATGTTCGTGGGCGAGCAG
CCGGGCGATCAGGAGGATCTGGACGGGCGCCCCTTCGTCGGGCCGGCCGGGCGGCTGTTCGATCAGGCCCTGCAGGATGC
TGGGCTGGAGCGGGCGCGGGCCTATGTCACCAATGCGGTGAAGCACTTCAAGTTCGAGCCGCGGGGCAAGCGGCGCCTCC
ATCAGTCGCCCAATCCCGTCGAGATCCGCGCCTGCAACACGTGGCTGGCGCGGGAGATCGCTCTGGTGCGGCCGCGCCTT
GTGGTGGCGCTGGGCGCCAGCGCCGCGCAGGCGGTGTCCGGCCGCGCGGTGCGCGTGGGCGAAAGTCGCGGGCGTATCAT
GCCACTTGAGGGGCGGGACGCGCTGGTGAGCGTTCATCCCTCCTATCTGCTGCGCCTGCCGGATGCGGAAGCCCGGGCGC
GCGAATATGACCGCTTCGTCGCGGACCTGCGGCTGGCGGCGCCCTATCTCGCCGGCTGA

Upstream 100 bases:

>100_bases
TGCGCCGACCACCGGCCCGGCGCCCTTCTGGACCGGACGGATCTGGAAGTCCGGCTCGCGCCGAAGCCGCGCCAGCTCGA
ACTCGCCTTGTGAGGCGGCG

Downstream 100 bases:

>100_bases
GATCAGCCGTGGCCGAGATAGAGCTTGGCCGCCCGCTCGTCCGCCAGCAGGCTCGCCGCATCGCCGGAGAGTGCCACCTT
TCCCCCATCGAGGATGGCGC

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA-Directed DNA Polymerase Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Glycosylase; Uracil DNA Glycosylase Protein; Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Spo1 DNA Polymerase-Related Protein; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MIHVRLECETDFAGWRQAARRLIGGGIAPRDVMWSVGGAADLFGAGAPLPDDTPAAQFTVPRGFLRLAETAFLHRDRERF
GLLYRLLARLRAEPGLLSIAMDSDVARVEGMAKSVRRDIHKMRAFVRFRQVEVAGAEWFVAWFEPEHHILEANAPFFQRR
FAGMKWSILTPEASAHWDGETLTFGPGGTRAEAPADDAMETLWRDYYASIFNPARLKISAMKSEMPVKYWRNLPEAALIA
PLIADAERRAGEMIAHAATPANPRPHRLEKAALDAEQADGLEALRAQALGCRACPLWAPATQTVFGEGPTDAPVMFVGEQ
PGDQEDLDGRPFVGPAGRLFDQALQDAGLERARAYVTNAVKHFKFEPRGKRRLHQSPNPVEIRACNTWLAREIALVRPRL
VVALGASAAQAVSGRAVRVGESRGRIMPLEGRDALVSVHPSYLLRLPDAEARAREYDRFVADLRLAAPYLAG

Sequences:

>Translated_472_residues
MIHVRLECETDFAGWRQAARRLIGGGIAPRDVMWSVGGAADLFGAGAPLPDDTPAAQFTVPRGFLRLAETAFLHRDRERF
GLLYRLLARLRAEPGLLSIAMDSDVARVEGMAKSVRRDIHKMRAFVRFRQVEVAGAEWFVAWFEPEHHILEANAPFFQRR
FAGMKWSILTPEASAHWDGETLTFGPGGTRAEAPADDAMETLWRDYYASIFNPARLKISAMKSEMPVKYWRNLPEAALIA
PLIADAERRAGEMIAHAATPANPRPHRLEKAALDAEQADGLEALRAQALGCRACPLWAPATQTVFGEGPTDAPVMFVGEQ
PGDQEDLDGRPFVGPAGRLFDQALQDAGLERARAYVTNAVKHFKFEPRGKRRLHQSPNPVEIRACNTWLAREIALVRPRL
VVALGASAAQAVSGRAVRVGESRGRIMPLEGRDALVSVHPSYLLRLPDAEARAREYDRFVADLRLAAPYLAG
>Mature_472_residues
MIHVRLECETDFAGWRQAARRLIGGGIAPRDVMWSVGGAADLFGAGAPLPDDTPAAQFTVPRGFLRLAETAFLHRDRERF
GLLYRLLARLRAEPGLLSIAMDSDVARVEGMAKSVRRDIHKMRAFVRFRQVEVAGAEWFVAWFEPEHHILEANAPFFQRR
FAGMKWSILTPEASAHWDGETLTFGPGGTRAEAPADDAMETLWRDYYASIFNPARLKISAMKSEMPVKYWRNLPEAALIA
PLIADAERRAGEMIAHAATPANPRPHRLEKAALDAEQADGLEALRAQALGCRACPLWAPATQTVFGEGPTDAPVMFVGEQ
PGDQEDLDGRPFVGPAGRLFDQALQDAGLERARAYVTNAVKHFKFEPRGKRRLHQSPNPVEIRACNTWLAREIALVRPRL
VVALGASAAQAVSGRAVRVGESRGRIMPLEGRDALVSVHPSYLLRLPDAEARAREYDRFVADLRLAAPYLAG

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 52160; Mature: 52160

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHVRLECETDFAGWRQAARRLIGGGIAPRDVMWSVGGAADLFGAGAPLPDDTPAAQFTV
CEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHEECCCHHHHCCCCCCCCCCCCCCEEEC
PRGFLRLAETAFLHRDRERFGLLYRLLARLRAEPGLLSIAMDSDVARVEGMAKSVRRDIH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KMRAFVRFRQVEVAGAEWFVAWFEPEHHILEANAPFFQRRFAGMKWSILTPEASAHWDGE
HHHHHHHHHHHEECCCEEEEEEECCCCEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCC
TLTFGPGGTRAEAPADDAMETLWRDYYASIFNPARLKISAMKSEMPVKYWRNLPEAALIA
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEHHHCCCCHHHHHCCCHHHHHH
PLIADAERRAGEMIAHAATPANPRPHRLEKAALDAEQADGLEALRAQALGCRACPLWAPA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHCCHHHHHHHHCCCCCCCCCCCC
TQTVFGEGPTDAPVMFVGEQPGDQEDLDGRPFVGPAGRLFDQALQDAGLERARAYVTNAV
CHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KHFKFEPRGKRRLHQSPNPVEIRACNTWLAREIALVRPRLVVALGASAAQAVSGRAVRVG
HHCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHCCEEEEEECCHHHHHHCCCEEEEE
ESRGRIMPLEGRDALVSVHPSYLLRLPDAEARAREYDRFVADLRLAAPYLAG
CCCCCEEEECCCCCEEEECHHHEEECCCHHHHHHHHHHHHHHHHHHCHHCCC
>Mature Secondary Structure
MIHVRLECETDFAGWRQAARRLIGGGIAPRDVMWSVGGAADLFGAGAPLPDDTPAAQFTV
CEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHEECCCHHHHCCCCCCCCCCCCCCEEEC
PRGFLRLAETAFLHRDRERFGLLYRLLARLRAEPGLLSIAMDSDVARVEGMAKSVRRDIH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KMRAFVRFRQVEVAGAEWFVAWFEPEHHILEANAPFFQRRFAGMKWSILTPEASAHWDGE
HHHHHHHHHHHEECCCEEEEEEECCCCEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCC
TLTFGPGGTRAEAPADDAMETLWRDYYASIFNPARLKISAMKSEMPVKYWRNLPEAALIA
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEEEHHHCCCCHHHHHCCCHHHHHH
PLIADAERRAGEMIAHAATPANPRPHRLEKAALDAEQADGLEALRAQALGCRACPLWAPA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHCCHHHHHHHHCCCCCCCCCCCC
TQTVFGEGPTDAPVMFVGEQPGDQEDLDGRPFVGPAGRLFDQALQDAGLERARAYVTNAV
CHHEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KHFKFEPRGKRRLHQSPNPVEIRACNTWLAREIALVRPRLVVALGASAAQAVSGRAVRVG
HHCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHCCEEEEEECCHHHHHHCCCEEEEE
ESRGRIMPLEGRDALVSVHPSYLLRLPDAEARAREYDRFVADLRLAAPYLAG
CCCCCEEEECCCCCEEEECHHHEEECCCHHHHHHHHHHHHHHHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA