| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158424608
Identifier: 158424608
GI number: 158424608
Start: 3412634
End: 3413257
Strand: Direct
Name: 158424608
Synonym: AZC_2984
Alternate gene names: NA
Gene position: 3412634-3413257 (Clockwise)
Preceding gene: 158424606
Following gene: 158424609
Centisome position: 63.55
GC content: 65.22
Gene sequence:
>624_bases ATGACCGACGCCACGCACTTCTACGAGCCCACCAAGGGCCATGGCCTGCCCCACGATCCTCTCAACGCCATCATCGGCCC GCGCCCCATCGGCTGGGTTTCGACGCGCGGCAAGGACGGCAGCATCAATCTCGCGCCCTACAGCTTCTTCAATGCCTTCA ACTACAAGCCGCCGATCATCGGCTTCTCCAGCACCAGCCCGAAGGACAGCCTGCGCAATGTGCAGGAGACGGGTGAATTC GTCTGGAACATCGTCACGCGCGACCTCGTCGGCCGTATGAACGACACCAGCGCACCGCTGCCCTATGGCCAGGACGAGTT CGAGCGCGCGGGGCTCACCAAGATCGAATCGCGCCTCGTCAATGTGCCGCGCGTCGCGGAAAGCCCGGTGCAGTTCGAGT GCAAGGTGGCCGACATCCACCAGTTGCGCAGCGCCTCCGGCGCCCCCATCCAGGCCTGGCTGGTTCTGGGTGAGGTGATC GGCGTGCACATTGCTCCGCATCTGCTGAAGGACGGCATCTTCGACACGTTCGGCGCCGGCATCGTGCTTCGCGCGGGCGG ACCGACCGCCTATGCAGCCGTCACGCCCGAGACCCGCTTCGATCTGGAGCGCCCAAAGGCCTGA
Upstream 100 bases:
>100_bases GCGTCGCTCGGCTCGGGGCTTTCCCCAGCGGTCAAGCTGGGCGATGGTCCGTCATCCTCATCCCTCTCTGCGGATCCGGC TCAGCCGGACCGGAGGCCCC
Downstream 100 bases:
>100_bases CACGACGTAGCGGCAGGCGGTGCTTGCACGCCGCAATGTTCACGCAACTGTCATGCAACCGGCCTAGGGGATGCCGCAGC GCCATCCCCTAGGAGAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTDATHFYEPTKGHGLPHDPLNAIIGPRPIGWVSTRGKDGSINLAPYSFFNAFNYKPPIIGFSSTSPKDSLRNVQETGEF VWNIVTRDLVGRMNDTSAPLPYGQDEFERAGLTKIESRLVNVPRVAESPVQFECKVADIHQLRSASGAPIQAWLVLGEVI GVHIAPHLLKDGIFDTFGAGIVLRAGGPTAYAAVTPETRFDLERPKA
Sequences:
>Translated_207_residues MTDATHFYEPTKGHGLPHDPLNAIIGPRPIGWVSTRGKDGSINLAPYSFFNAFNYKPPIIGFSSTSPKDSLRNVQETGEF VWNIVTRDLVGRMNDTSAPLPYGQDEFERAGLTKIESRLVNVPRVAESPVQFECKVADIHQLRSASGAPIQAWLVLGEVI GVHIAPHLLKDGIFDTFGAGIVLRAGGPTAYAAVTPETRFDLERPKA >Mature_206_residues TDATHFYEPTKGHGLPHDPLNAIIGPRPIGWVSTRGKDGSINLAPYSFFNAFNYKPPIIGFSSTSPKDSLRNVQETGEFV WNIVTRDLVGRMNDTSAPLPYGQDEFERAGLTKIESRLVNVPRVAESPVQFECKVADIHQLRSASGAPIQAWLVLGEVIG VHIAPHLLKDGIFDTFGAGIVLRAGGPTAYAAVTPETRFDLERPKA
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 22579; Mature: 22448
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDATHFYEPTKGHGLPHDPLNAIIGPRPIGWVSTRGKDGSINLAPYSFFNAFNYKPPII CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCEEECCHHHHHCCCCCCCEE GFSSTSPKDSLRNVQETGEFVWNIVTRDLVGRMNDTSAPLPYGQDEFERAGLTKIESRLV ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHH NVPRVAESPVQFECKVADIHQLRSASGAPIQAWLVLGEVIGVHIAPHLLKDGIFDTFGAG CCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC IVLRAGGPTAYAAVTPETRFDLERPKA EEEECCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TDATHFYEPTKGHGLPHDPLNAIIGPRPIGWVSTRGKDGSINLAPYSFFNAFNYKPPII CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCEEECCHHHHHCCCCCCCEE GFSSTSPKDSLRNVQETGEFVWNIVTRDLVGRMNDTSAPLPYGQDEFERAGLTKIESRLV ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHH NVPRVAESPVQFECKVADIHQLRSASGAPIQAWLVLGEVIGVHIAPHLLKDGIFDTFGAG CCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC IVLRAGGPTAYAAVTPETRFDLERPKA EEEECCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]