| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yfeH [C]
Identifier: 158424564
GI number: 158424564
Start: 3362333
End: 3363373
Strand: Reverse
Name: yfeH [C]
Synonym: AZC_2940
Alternate gene names: 158424564
Gene position: 3363373-3362333 (Counterclockwise)
Preceding gene: 158424565
Following gene: 158424563
Centisome position: 62.64
GC content: 65.9
Gene sequence:
>1041_bases ATGTCTCGCTTCAAGCTCGACCCCTTCGTCATCGCGCTCGCCCTGACCGTCCTTGCCGCTCTCGTCTGGCCCGTTCCGGG CGTGACGGATGGACCGCTCCATGCCGACAAGGCCGCGAGCTATGGCGTCGCCTTCATCTTCATCCTGTACGGCCTGTCGC TGGCGCCCGATCAGCTCTGGAAGAGCGTCGGGCGCTGGCGGGTGCATCTGGTGGTGCAATGCGCCACCTTCGTGCTCTTC CCGGTGGTGGTGCTCGCCGCCCATCCGCTGCTGCTGCGCGTGATGCCCCCCGAGATGGTGACCGGCTTCTTCTTCCTCGC CGCGCTGCCCTCCACCGTCTCGTCCTCGGTGGCGATGACCTCGCTGGCGCGGGGCAACGTGCCGGTGGCCATCTTCAATG CCAGCATCTCCAGCCTCATCGGCGTGTTCATCACGCCGCTGCTGATGGCCTGGTACATGCACGCGACGGGCGGGCAACTC GATCTGGAAGGCGTCATCATCAAGCTGGTGCTTCTGGTGATGCTGCCCGTCGGCATCGGTCAGATGCTGCGCCCCGTGGC GGCCAGTTTCATCGCTCGGCACAAGCGGGCCGCACGCATCGCCGATCGCGCCGTCATCCTGATGATCGTCTACAACTCGT TCTGCGACAGCGTCGCCGGAGGGGTGTGGAGCCGGCACGACACCAGCCTCATCATCGAGATGGTGGTGGGCGTGGTGGCG CTGTTCTTTGTCGTTTATGGCCTCCTCAGCGTGATCTGCCGGATCATCGGCTTCAACTACGGTGACCGCATCGCGGTCCT GTTCTGCGGTTCCAAGAAGTCGCTGGCGACGGGCCTGCCCATGGCCAGCGTGATCTTCGGCGCGCAGGCAGAACTCAGCC TCATCATCGCGCCGGTGATGCTCTTCCACTTCATCCAGCTGGTGCTGGTCAGCTTCATCGCCAGCCACAATGTGGGGCGG CTGGAGCGCGCGGAGGCGCAGGCCCGCGCTCAGGCCGCCGGAGACGGCCCGCTGCCAGAGCCCCGGCACGCGACGAAGTG A
Upstream 100 bases:
>100_bases AAAAAAATCGCAGACGAGTTCTTCAAGAACTTCGCCGAAGCGGTCGCGCAGCAGGAGACGCCGTAGGGGGCGACGGCCCC TCTGTTCTCGTGCGTTTCCG
Downstream 100 bases:
>100_bases TGCGCAGGCGGTCAGGTGCGGCGTTGCGCGTTCAACGCCACGCTTGACCGCCGCCGCCGCGCGGCCCCACACTGGAGCCA TTACAAAGCACCCCAGCCGT
Product: Na+-dependent transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSRFKLDPFVIALALTVLAALVWPVPGVTDGPLHADKAASYGVAFIFILYGLSLAPDQLWKSVGRWRVHLVVQCATFVLF PVVVLAAHPLLLRVMPPEMVTGFFFLAALPSTVSSSVAMTSLARGNVPVAIFNASISSLIGVFITPLLMAWYMHATGGQL DLEGVIIKLVLLVMLPVGIGQMLRPVAASFIARHKRAARIADRAVILMIVYNSFCDSVAGGVWSRHDTSLIIEMVVGVVA LFFVVYGLLSVICRIIGFNYGDRIAVLFCGSKKSLATGLPMASVIFGAQAELSLIIAPVMLFHFIQLVLVSFIASHNVGR LERAEAQARAQAAGDGPLPEPRHATK
Sequences:
>Translated_346_residues MSRFKLDPFVIALALTVLAALVWPVPGVTDGPLHADKAASYGVAFIFILYGLSLAPDQLWKSVGRWRVHLVVQCATFVLF PVVVLAAHPLLLRVMPPEMVTGFFFLAALPSTVSSSVAMTSLARGNVPVAIFNASISSLIGVFITPLLMAWYMHATGGQL DLEGVIIKLVLLVMLPVGIGQMLRPVAASFIARHKRAARIADRAVILMIVYNSFCDSVAGGVWSRHDTSLIIEMVVGVVA LFFVVYGLLSVICRIIGFNYGDRIAVLFCGSKKSLATGLPMASVIFGAQAELSLIIAPVMLFHFIQLVLVSFIASHNVGR LERAEAQARAQAAGDGPLPEPRHATK >Mature_345_residues SRFKLDPFVIALALTVLAALVWPVPGVTDGPLHADKAASYGVAFIFILYGLSLAPDQLWKSVGRWRVHLVVQCATFVLFP VVVLAAHPLLLRVMPPEMVTGFFFLAALPSTVSSSVAMTSLARGNVPVAIFNASISSLIGVFITPLLMAWYMHATGGQLD LEGVIIKLVLLVMLPVGIGQMLRPVAASFIARHKRAARIADRAVILMIVYNSFCDSVAGGVWSRHDTSLIIEMVVGVVAL FFVVYGLLSVICRIIGFNYGDRIAVLFCGSKKSLATGLPMASVIFGAQAELSLIIAPVMLFHFIQLVLVSFIASHNVGRL ERAEAQARAQAAGDGPLPEPRHATK
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfeH [H]
Homologues:
Organism=Homo sapiens, GI71725371, Length=327, Percent_Identity=30.2752293577982, Blast_Score=135, Evalue=4e-32, Organism=Escherichia coli, GI1788749, Length=336, Percent_Identity=35.7142857142857, Blast_Score=184, Evalue=7e-48, Organism=Saccharomyces cerevisiae, GI6323677, Length=382, Percent_Identity=23.8219895287958, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002657 - InterPro: IPR016833 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 37172; Mature: 37041
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFKLDPFVIALALTVLAALVWPVPGVTDGPLHADKAASYGVAFIFILYGLSLAPDQLW CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH KSVGRWRVHLVVQCATFVLFPVVVLAAHPLLLRVMPPEMVTGFFFLAALPSTVSSSVAMT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHH SLARGNVPVAIFNASISSLIGVFITPLLMAWYMHATGGQLDLEGVIIKLVLLVMLPVGIG HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHH QMLRPVAASFIARHKRAARIADRAVILMIVYNSFCDSVAGGVWSRHDTSLIIEMVVGVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LFFVVYGLLSVICRIIGFNYGDRIAVLFCGSKKSLATGLPMASVIFGAQAELSLIIAPVM HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCHHHHHHCCCHHHHHHHHHHH LFHFIQLVLVSFIASHNVGRLERAEAQARAQAAGDGPLPEPRHATK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SRFKLDPFVIALALTVLAALVWPVPGVTDGPLHADKAASYGVAFIFILYGLSLAPDQLW CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH KSVGRWRVHLVVQCATFVLFPVVVLAAHPLLLRVMPPEMVTGFFFLAALPSTVSSSVAMT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHH SLARGNVPVAIFNASISSLIGVFITPLLMAWYMHATGGQLDLEGVIIKLVLLVMLPVGIG HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHH QMLRPVAASFIARHKRAARIADRAVILMIVYNSFCDSVAGGVWSRHDTSLIIEMVVGVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LFFVVYGLLSVICRIIGFNYGDRIAVLFCGSKKSLATGLPMASVIFGAQAELSLIIAPVM HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHCCCHHHHHHCCCHHHHHHHHHHH LFHFIQLVLVSFIASHNVGRLERAEAQARAQAAGDGPLPEPRHATK HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]