| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424540
Identifier: 158424540
GI number: 158424540
Start: 3330324
End: 3331757
Strand: Reverse
Name: 158424540
Synonym: AZC_2916
Alternate gene names: NA
Gene position: 3331757-3330324 (Counterclockwise)
Preceding gene: 158424541
Following gene: 158424539
Centisome position: 62.05
GC content: 61.79
Gene sequence:
>1434_bases ATGAGCGCCAGCATCACCGGTATGACCGGGCATGACGCTTTGTCGATGGTGCTCCGTTTAAGAGAATCGGGCGAAGATGT GGTGCTCTTTACCGATGCGACGCGCGCGGGCAGCCGTGCTTCCGTCTACGATTTGGCAGATGCGCCGCTCCTGATGTCTG CCGGTGATCTGCTGATTTATCACTTCAACGGGCCGGATGAGGCTGCCGAGCGCATTCTCCAGAGACTTAAATGCGAGATT GTTCTGCGTCCACACACCCTCGCACAGCACGAGATCGATCCGAAATCGTCGGTTCGCGCTGCCAGGCGTCAGCGAGAAAC CCGGGCTGCTCTGGCGCGGCTGAGGGATAGAAGGGTGATAGAGGCATGGCTGCCTGCAGGCATCATTCTTGAAGAAGCCG AGCGGACACTTCGTATGCCCTGCGCTCGCGTTCCCCAGTTTATAGAGACTGATAGCCTATTTAGGGCGCAAACTGAGAGT CAGGCCAGCTCCGCGCTGACAGAGCACTGGCTTAATATCCTTATCGTTTCGCCCCTCGCGGCAGACGCCGGCATCGAGCA GGCCCTGCGCACCTTCAGCGGCTTTAACCGAACGTCGCTGGCCGGAGCGCATCTCCACATTGTCGGCGATGCCGGCGGGG ACGACCAATATTTGCGTCATCTGGGTGGCTTGGCGGGCGGCCTTCAACTCGCCGGGTCATTCACCCACCACTTCGACCCG CTGCCGGGTGCCCTCGCGTCACTCTATAGGGGCTGTGACCTGTTCCTGGCCACGCAGGGGGCGACGCCGGAAGCGGTCAC GCGCGCCCTGGCGTTCGGTCTGCCCGTCGTTGCGCTCTCGTCTTCCACCGCTGCAGATCTGGCTGGTGAAGCTGCCTTTC TGGCGGGGTCACCAGATAAGCTGGCCAATATGGCTCACACGCTGGTCATGGATGCCTTCGGCATGGCCTCCGCGAAACGT GCTGCCCTCCAGCGGTTCAACGACCATTGTGAAAGTCGGCACGTCGCTGCATCGCTCCTCACGGCACTCTCAAATACACG CCATAGGCTTCTTGAGCCGATTGGTGAACATGCCGATATCAGCGGTGACTGGTTCGGCATTCCACAGGCCGAGGAATTGG TCCGAGCGGCCATCCAACTCGCGCCGGATCTCCGGGCTCATTCTCTCGACGGGGAGGACCGCCGGCGCGATTTTATCGCA TGGATCATTTCCGCCGAGTGCGGCCGCTCCGAGGCGCGCCCCGGACTCCTCGACGGTCCGCAGTTTAGCGCCTACGCGGC GCACCTCCCGGTCCCGCGAGCCGCTTCGCATCTCGGCGCCGAACAGCGCCTGAAGTGGTTCTTTGACAGAGAAGTACGCA GCGCCTTCGATCTTCACAGCTCTGCGTCGGTGGCCGCATATATCGAATGGTCGCAGGAACAGGCGGCCGCCTAG
Upstream 100 bases:
>100_bases GTGAGCGTAACTCGATCGCCGTTTTCGCCGGGAAGGTCGCCGCCTCCCTCGGCTATGGCGACGCCTTGAGCCGGGAGATT GAGCAATGCGCATCGGCGTG
Downstream 100 bases:
>100_bases CTGCGGCGGCCGGAGAGGATTTTATCGCCGCCAACGTTCTGGATGGCTATTGCACCAACACAGCCAGTGGTTGTTAAGAT CATCCTTCGGAGACTTGAAG
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MSASITGMTGHDALSMVLRLRESGEDVVLFTDATRAGSRASVYDLADAPLLMSAGDLLIYHFNGPDEAAERILQRLKCEI VLRPHTLAQHEIDPKSSVRAARRQRETRAALARLRDRRVIEAWLPAGIILEEAERTLRMPCARVPQFIETDSLFRAQTES QASSALTEHWLNILIVSPLAADAGIEQALRTFSGFNRTSLAGAHLHIVGDAGGDDQYLRHLGGLAGGLQLAGSFTHHFDP LPGALASLYRGCDLFLATQGATPEAVTRALAFGLPVVALSSSTAADLAGEAAFLAGSPDKLANMAHTLVMDAFGMASAKR AALQRFNDHCESRHVAASLLTALSNTRHRLLEPIGEHADISGDWFGIPQAEELVRAAIQLAPDLRAHSLDGEDRRRDFIA WIISAECGRSEARPGLLDGPQFSAYAAHLPVPRAASHLGAEQRLKWFFDREVRSAFDLHSSASVAAYIEWSQEQAAA
Sequences:
>Translated_477_residues MSASITGMTGHDALSMVLRLRESGEDVVLFTDATRAGSRASVYDLADAPLLMSAGDLLIYHFNGPDEAAERILQRLKCEI VLRPHTLAQHEIDPKSSVRAARRQRETRAALARLRDRRVIEAWLPAGIILEEAERTLRMPCARVPQFIETDSLFRAQTES QASSALTEHWLNILIVSPLAADAGIEQALRTFSGFNRTSLAGAHLHIVGDAGGDDQYLRHLGGLAGGLQLAGSFTHHFDP LPGALASLYRGCDLFLATQGATPEAVTRALAFGLPVVALSSSTAADLAGEAAFLAGSPDKLANMAHTLVMDAFGMASAKR AALQRFNDHCESRHVAASLLTALSNTRHRLLEPIGEHADISGDWFGIPQAEELVRAAIQLAPDLRAHSLDGEDRRRDFIA WIISAECGRSEARPGLLDGPQFSAYAAHLPVPRAASHLGAEQRLKWFFDREVRSAFDLHSSASVAAYIEWSQEQAAA >Mature_476_residues SASITGMTGHDALSMVLRLRESGEDVVLFTDATRAGSRASVYDLADAPLLMSAGDLLIYHFNGPDEAAERILQRLKCEIV LRPHTLAQHEIDPKSSVRAARRQRETRAALARLRDRRVIEAWLPAGIILEEAERTLRMPCARVPQFIETDSLFRAQTESQ ASSALTEHWLNILIVSPLAADAGIEQALRTFSGFNRTSLAGAHLHIVGDAGGDDQYLRHLGGLAGGLQLAGSFTHHFDPL PGALASLYRGCDLFLATQGATPEAVTRALAFGLPVVALSSSTAADLAGEAAFLAGSPDKLANMAHTLVMDAFGMASAKRA ALQRFNDHCESRHVAASLLTALSNTRHRLLEPIGEHADISGDWFGIPQAEELVRAAIQLAPDLRAHSLDGEDRRRDFIAW IISAECGRSEARPGLLDGPQFSAYAAHLPVPRAASHLGAEQRLKWFFDREVRSAFDLHSSASVAAYIEWSQEQAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51621; Mature: 51490
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00087 SOD_CU_ZN_1 ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASITGMTGHDALSMVLRLRESGEDVVLFTDATRAGSRASVYDLADAPLLMSAGDLLIY CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEE HFNGPDEAAERILQRLKCEIVLRPHTLAQHEIDPKSSVRAARRQRETRAALARLRDRRVI EECCHHHHHHHHHHHCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAWLPAGIILEEAERTLRMPCARVPQFIETDSLFRAQTESQASSALTEHWLNILIVSPLA HHHCCCCHHHHHHHHHHHCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHH ADAGIEQALRTFSGFNRTSLAGAHLHIVGDAGGDDQYLRHLGGLAGGLQLAGSFTHHFDP HHHHHHHHHHHHCCCCCCEECCEEEEEEECCCCCHHHHHHHCCHHHHHHHHCCHHHCCCC LPGALASLYRGCDLFLATQGATPEAVTRALAFGLPVVALSSSTAADLAGEAAFLAGSPDK CCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCHHHHCCCCEEECCCHHH LANMAHTLVMDAFGMASAKRAALQRFNDHCESRHVAASLLTALSNTRHRLLEPIGEHADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SGDWFGIPQAEELVRAAIQLAPDLRAHSLDGEDRRRDFIAWIISAECGRSEARPGLLDGP CCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHEEEHHCCCCCCCCCCCCCC QFSAYAAHLPVPRAASHLGAEQRLKWFFDREVRSAFDLHSSASVAAYIEWSQEQAAA CCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCC >Mature Secondary Structure SASITGMTGHDALSMVLRLRESGEDVVLFTDATRAGSRASVYDLADAPLLMSAGDLLIY CCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEE HFNGPDEAAERILQRLKCEIVLRPHTLAQHEIDPKSSVRAARRQRETRAALARLRDRRVI EECCHHHHHHHHHHHCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EAWLPAGIILEEAERTLRMPCARVPQFIETDSLFRAQTESQASSALTEHWLNILIVSPLA HHHCCCCHHHHHHHHHHHCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHH ADAGIEQALRTFSGFNRTSLAGAHLHIVGDAGGDDQYLRHLGGLAGGLQLAGSFTHHFDP HHHHHHHHHHHHCCCCCCEECCEEEEEEECCCCCHHHHHHHCCHHHHHHHHCCHHHCCCC LPGALASLYRGCDLFLATQGATPEAVTRALAFGLPVVALSSSTAADLAGEAAFLAGSPDK CCHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCHHHHCCCCEEECCCHHH LANMAHTLVMDAFGMASAKRAALQRFNDHCESRHVAASLLTALSNTRHRLLEPIGEHADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SGDWFGIPQAEELVRAAIQLAPDLRAHSLDGEDRRRDFIAWIISAECGRSEARPGLLDGP CCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHEEEHHCCCCCCCCCCCCCC QFSAYAAHLPVPRAASHLGAEQRLKWFFDREVRSAFDLHSSASVAAYIEWSQEQAAA CCCCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA