| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424538
Identifier: 158424538
GI number: 158424538
Start: 3327127
End: 3329310
Strand: Reverse
Name: 158424538
Synonym: AZC_2914
Alternate gene names: NA
Gene position: 3329310-3327127 (Counterclockwise)
Preceding gene: 158424539
Following gene: 158424535
Centisome position: 62.0
GC content: 69.73
Gene sequence:
>2184_bases ATGGACAATCAGCCCATTCCGACACCGACGGCCCGCATGCGGGCGCTGCTCATCCTGTTCGCGGCCACCATCCTGTTGCC GGTGGCTCTCATCGGCCTAGGATACTGGGAGCACGGGCGGGTTTCGGACGCGCTTGGGCAGGCGCAGGATCGGCGTGATC GGATGGCTGGCATGCTCCAGCAACTGGAAGCTCGACAGAAGCCGGGCGCCGGCATCGATTACAGCATCCGCTTCATGCGC GGCGGGCAGACCTTCGTGGGTCCGCTGGCCATCTCCGAGGCCCGCAAGACGCTCGACTATCTGGAGGAAGGCGTTCTCCT GGAGGAGGTGCGGCAACCCCTGCCGACAGTGGCGATGGTGAGCGCCGCGGCGGTCGCCGCGCTCTCCGTGCTGGCCATTC TCACGGCCGTCCTGCTGGGCCGGGCGGGGCGTGCGTCGCGCGACATGCTGGTCACCGGCTTCTCCTTCGCCCGCCGCATG CTGCGCCCGCTGCTGCTCGTGCAGGTGGTGCTGGGGGCGCTCGCGTTGATTGCGGTGGTTGTCTTTGAGGCGCTGCCCTT CGTGCATGGGGGCGGGCGGGAGTGGGGCCTGAGCGACGGGAACGGCGCCAAGCTGTTTGCGCTGGGCGTCGCGATTGCCG GCGTCGCCGCTTGGACCGCCATCAAGACCTTCGTCGGGCTGCGGCGCGCCGTGCAGCTCTTCGACCCCGATCCCATGCCG ATCATCGGCCACACGGTCAGTCGCGCGGAAGCGCCGGGCCTGTGGGGGCTCGTGGACGATCTGGCCGGGCGCCTAGGCGC GCTGAAGCCGGACAATGTGGTGGTGGGTCTCGCCGGCGGCTTCTTCGTGTCCTCCGGCCCCAAGGTGCTCCGGCCGGACG ATACGCGGCTCTCGGGCAACACGCTCTATCTGCCCTTGCCTTATCTCGCTTTGCTGCGGGAGGACGAGGTGGCCACCATC ATCGGCCACGAACTGGCGCATTTTTCCGGCGGCGATACGCAATACAGCCTCCGCTTCGTGCCGCTCTATGCCGGGGTCTC CCGCTCGCTGGAGGCGGTGGCGCTGGCCGGCATGACCGGTGACGGCAAGATCTCGCCCTTCACCTATCCGGCCTTCCAGC TCGGTGTGTTCGTGCTCAACCAGTTCGACGGCGCGGTGCTGCACTGGAGTCGCAAGCGCGAGTTCGAGGCCGACGCGGCG GGTGCGCGTGTCACGTCGAACGAGGCGGGCGCCCGCGCGCTGCTGCGCACGCTGGCGGTGGAGCCCCGCATCAATGAGGT GCTCGAGGCGGCCCACGAAGATCCCGACAACGCCCCGGCGGATCTGGTGGCCTTCACCGTGGACCATGTGGCAGACCGGG GGGCCGAGGATCCGAGCCCTCACCTGGACAAGCGCCAGCCGCACCCCACGGACACCCATCCGCCCACCGTGCAGCGCATC GCTGCCCTCGGGCGGGAGGTGACGCCGGCCGCACTCGCCGAGGCCGTGGCGCCGCCCGCGCCGGGTGCCCTGGCTCGCCT GTCCGCCTATTTCGCGGACCCGGCCGGCATCGCGCGGACCGCCAGTGCGCGCTTCGTCGGCACCGTGCGCCAGAACATGC AGGCCCAGCGCGAGGCCCTTCAGGCGCTGGCCGACGAGGTGCAGGCCGAGCCGGTGCCGCTCCATGAGAACACGCGGCCC GGTGCGATCTTCCTCTTCGTCTTCGGTGGGCTGTTCGTCGCGGCCGCGGCCGCCGTGGCCTTCATGGGGCGCGTGCCGGG CTTCTCTGTCTCCGAGACGCAGCTCCTGGCCGGGCTCGCCGGCGGGATGGGGCTGATCTTCATGCTGTTCGGCATTCCGC TGCTGCTGCGCAGCCGGAAGCCCTGCCTGATCCTGGAGCGGGATGCGCTGGTTCACCCGGGCCTCGACCGCCCCATCGTG TGGACCGACATCAGCGGCACCGGATACGTGAATGACCGCGGCGCCCTGGTCATCAATCTGGCGATCGGTCCGGACGCCCC GTTTCCAGCCAAGGTACGAGGCGCGCGCCGCATCAAGGTGAAGCCGAAGCAGCGGCTCATCACCATCAAGGCGGTGCCCC CGCGCAAGCTCAAGGCGCGCGGGATGGCGGATCTCATCGAGGACTATATCCGGGCTGCCCATGCCCGCCGCATTCTGGCG GAAGATGCGCGGCTGAGCGCGTGA
Upstream 100 bases:
>100_bases ATGGATAAGCGTAGCGTCATCTTGCGCAGCCTCCATGCCTGATGCAGAAAAAGACATGGTGCGCGTATCTGCTTGCTGAA TTCGCCCGGAGCCCCGTCCC
Downstream 100 bases:
>100_bases GCCGCATCGCCAGACGTTGATATGAAAGAAGGGGGGAGGCGCGCCTCCCCCCTTTGGTTTCAGCGATCCGCGCTTACTTG GCGGGCTTCACGTTCATCGC
Product: peptidase
Products: NA
Alternate protein names: Oligopeptide ABC Transporter
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MDNQPIPTPTARMRALLILFAATILLPVALIGLGYWEHGRVSDALGQAQDRRDRMAGMLQQLEARQKPGAGIDYSIRFMR GGQTFVGPLAISEARKTLDYLEEGVLLEEVRQPLPTVAMVSAAAVAALSVLAILTAVLLGRAGRASRDMLVTGFSFARRM LRPLLLVQVVLGALALIAVVVFEALPFVHGGGREWGLSDGNGAKLFALGVAIAGVAAWTAIKTFVGLRRAVQLFDPDPMP IIGHTVSRAEAPGLWGLVDDLAGRLGALKPDNVVVGLAGGFFVSSGPKVLRPDDTRLSGNTLYLPLPYLALLREDEVATI IGHELAHFSGGDTQYSLRFVPLYAGVSRSLEAVALAGMTGDGKISPFTYPAFQLGVFVLNQFDGAVLHWSRKREFEADAA GARVTSNEAGARALLRTLAVEPRINEVLEAAHEDPDNAPADLVAFTVDHVADRGAEDPSPHLDKRQPHPTDTHPPTVQRI AALGREVTPAALAEAVAPPAPGALARLSAYFADPAGIARTASARFVGTVRQNMQAQREALQALADEVQAEPVPLHENTRP GAIFLFVFGGLFVAAAAAVAFMGRVPGFSVSETQLLAGLAGGMGLIFMLFGIPLLLRSRKPCLILERDALVHPGLDRPIV WTDISGTGYVNDRGALVINLAIGPDAPFPAKVRGARRIKVKPKQRLITIKAVPPRKLKARGMADLIEDYIRAAHARRILA EDARLSA
Sequences:
>Translated_727_residues MDNQPIPTPTARMRALLILFAATILLPVALIGLGYWEHGRVSDALGQAQDRRDRMAGMLQQLEARQKPGAGIDYSIRFMR GGQTFVGPLAISEARKTLDYLEEGVLLEEVRQPLPTVAMVSAAAVAALSVLAILTAVLLGRAGRASRDMLVTGFSFARRM LRPLLLVQVVLGALALIAVVVFEALPFVHGGGREWGLSDGNGAKLFALGVAIAGVAAWTAIKTFVGLRRAVQLFDPDPMP IIGHTVSRAEAPGLWGLVDDLAGRLGALKPDNVVVGLAGGFFVSSGPKVLRPDDTRLSGNTLYLPLPYLALLREDEVATI IGHELAHFSGGDTQYSLRFVPLYAGVSRSLEAVALAGMTGDGKISPFTYPAFQLGVFVLNQFDGAVLHWSRKREFEADAA GARVTSNEAGARALLRTLAVEPRINEVLEAAHEDPDNAPADLVAFTVDHVADRGAEDPSPHLDKRQPHPTDTHPPTVQRI AALGREVTPAALAEAVAPPAPGALARLSAYFADPAGIARTASARFVGTVRQNMQAQREALQALADEVQAEPVPLHENTRP GAIFLFVFGGLFVAAAAAVAFMGRVPGFSVSETQLLAGLAGGMGLIFMLFGIPLLLRSRKPCLILERDALVHPGLDRPIV WTDISGTGYVNDRGALVINLAIGPDAPFPAKVRGARRIKVKPKQRLITIKAVPPRKLKARGMADLIEDYIRAAHARRILA EDARLSA >Mature_727_residues MDNQPIPTPTARMRALLILFAATILLPVALIGLGYWEHGRVSDALGQAQDRRDRMAGMLQQLEARQKPGAGIDYSIRFMR GGQTFVGPLAISEARKTLDYLEEGVLLEEVRQPLPTVAMVSAAAVAALSVLAILTAVLLGRAGRASRDMLVTGFSFARRM LRPLLLVQVVLGALALIAVVVFEALPFVHGGGREWGLSDGNGAKLFALGVAIAGVAAWTAIKTFVGLRRAVQLFDPDPMP IIGHTVSRAEAPGLWGLVDDLAGRLGALKPDNVVVGLAGGFFVSSGPKVLRPDDTRLSGNTLYLPLPYLALLREDEVATI IGHELAHFSGGDTQYSLRFVPLYAGVSRSLEAVALAGMTGDGKISPFTYPAFQLGVFVLNQFDGAVLHWSRKREFEADAA GARVTSNEAGARALLRTLAVEPRINEVLEAAHEDPDNAPADLVAFTVDHVADRGAEDPSPHLDKRQPHPTDTHPPTVQRI AALGREVTPAALAEAVAPPAPGALARLSAYFADPAGIARTASARFVGTVRQNMQAQREALQALADEVQAEPVPLHENTRP GAIFLFVFGGLFVAAAAAVAFMGRVPGFSVSETQLLAGLAGGMGLIFMLFGIPLLLRSRKPCLILERDALVHPGLDRPIV WTDISGTGYVNDRGALVINLAIGPDAPFPAKVRGARRIKVKPKQRLITIKAVPPRKLKARGMADLIEDYIRAAHARRILA EDARLSA
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77562; Mature: 77562
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNQPIPTPTARMRALLILFAATILLPVALIGLGYWEHGRVSDALGQAQDRRDRMAGMLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH QLEARQKPGAGIDYSIRFMRGGQTFVGPLAISEARKTLDYLEEGVLLEEVRQPLPTVAMV HHHHHCCCCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHH SAAAVAALSVLAILTAVLLGRAGRASRDMLVTGFSFARRMLRPLLLVQVVLGALALIAVV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH VFEALPFVHGGGREWGLSDGNGAKLFALGVAIAGVAAWTAIKTFVGLRRAVQLFDPDPMP HHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IIGHTVSRAEAPGLWGLVDDLAGRLGALKPDNVVVGLAGGFFVSSGPKVLRPDDTRLSGN CCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCEECCCCCEECCC TLYLPLPYLALLREDEVATIIGHELAHFSGGDTQYSLRFVPLYAGVSRSLEAVALAGMTG EEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEHHCHHHCHHHHEEECCCC DGKISPFTYPAFQLGVFVLNQFDGAVLHWSRKREFEADAAGARVTSNEAGARALLRTLAV CCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHCCCCCCCCCCEEECCHHHHHHHHHHHHC EPRINEVLEAAHEDPDNAPADLVAFTVDHVADRGAEDPSPHLDKRQPHPTDTHPPTVQRI CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH AALGREVTPAALAEAVAPPAPGALARLSAYFADPAGIARTASARFVGTVRQNMQAQREAL HHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QALADEVQAEPVPLHENTRPGAIFLFVFGGLFVAAAAAVAFMGRVPGFSVSETQLLAGLA HHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH GGMGLIFMLFGIPLLLRSRKPCLILERDALVHPGLDRPIVWTDISGTGYVNDRGALVINL HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEE AIGPDAPFPAKVRGARRIKVKPKQRLITIKAVPPRKLKARGMADLIEDYIRAAHARRILA EECCCCCCCHHCCCCEEEEECCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHH EDARLSA HHHHCCC >Mature Secondary Structure MDNQPIPTPTARMRALLILFAATILLPVALIGLGYWEHGRVSDALGQAQDRRDRMAGMLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH QLEARQKPGAGIDYSIRFMRGGQTFVGPLAISEARKTLDYLEEGVLLEEVRQPLPTVAMV HHHHHCCCCCCCCEEEEEEECCCCEECHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHH SAAAVAALSVLAILTAVLLGRAGRASRDMLVTGFSFARRMLRPLLLVQVVLGALALIAVV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH VFEALPFVHGGGREWGLSDGNGAKLFALGVAIAGVAAWTAIKTFVGLRRAVQLFDPDPMP HHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IIGHTVSRAEAPGLWGLVDDLAGRLGALKPDNVVVGLAGGFFVSSGPKVLRPDDTRLSGN CCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCEECCCCCEECCC TLYLPLPYLALLREDEVATIIGHELAHFSGGDTQYSLRFVPLYAGVSRSLEAVALAGMTG EEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEHHCHHHCHHHHEEECCCC DGKISPFTYPAFQLGVFVLNQFDGAVLHWSRKREFEADAAGARVTSNEAGARALLRTLAV CCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHCCCCCCCCCCEEECCHHHHHHHHHHHHC EPRINEVLEAAHEDPDNAPADLVAFTVDHVADRGAEDPSPHLDKRQPHPTDTHPPTVQRI CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH AALGREVTPAALAEAVAPPAPGALARLSAYFADPAGIARTASARFVGTVRQNMQAQREAL HHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QALADEVQAEPVPLHENTRPGAIFLFVFGGLFVAAAAAVAFMGRVPGFSVSETQLLAGLA HHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH GGMGLIFMLFGIPLLLRSRKPCLILERDALVHPGLDRPIVWTDISGTGYVNDRGALVINL HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEE AIGPDAPFPAKVRGARRIKVKPKQRLITIKAVPPRKLKARGMADLIEDYIRAAHARRILA EECCCCCCCHHCCCCEEEEECCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHH EDARLSA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA