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The map label for this gene is 158424515

Identifier: 158424515

GI number: 158424515

Start: 3303274

End: 3304167

Strand: Reverse

Name: 158424515

Synonym: AZC_2891

Alternate gene names: NA

Gene position: 3304167-3303274 (Counterclockwise)

Preceding gene: 158424516

Following gene: 158424510

Centisome position: 61.53

GC content: 72.26

Gene sequence:

>894_bases
ATGAGCCTGCCGCCTGATTTCGGCGTTCCGCCCGCCCTCGCCGCCACGCCGGCGGCGGCGAGCGACTACGCCTATTGCAC
CGATCTCGTGCGGGCGCAGGACCGCGACCGCTTCCTCGCCGCGCTGTTCGCCCCGGCGGACAAGCGGCAGGACCTGTTCG
CCCTCTATGCCTTCAACGTGGAAGTCGCCCGTGTGCGCGAGGTCGTGCGCGAAGCCCTGCCCGGGGAGGTGCGCCTGCAA
TGGTGGCGCGAACTGATCGAGGGCCACGGACGCGGCGAAGTGGGCGGCCATCCGGTGGCGAGCGCCCTGCTCGGCACCAT
CGGCCGCTACAGCCTGCCGCGCGGCGCGCTGCTGAATCTCATCGAGGCGCGGGTGTTCGATCTCTATGACGACCCCATGC
CGAGCATGAACGATCTGGAGGGCTATGCGGGCGAGACCGCTTCGGCGCTGCTCCAGCTCTCCGCCCATATCCTCGGCGGC
GGCCCGCGTCCGGCTCTGGCCAATGCCTGCGGGCATGGAGGGGTCGCCATTGCGCTGGCGGGCCTGATGCGGGCCCTGCC
GGTGCATGCGGCGCGCGGGCAGTGCTTCCTGCCGCTCGATGTGCTGAAGCGCCACGGCTCCAGCCGCGACGAGGTGGTGG
CCCGCAAGCCGACGCCGGGCATCCTCGCGACGCTGGCCGATCTGCGCACCCAAGCCGCGCGCCATCTCATGGAAGCGGAG
AAGGCGCTGGCCGGGCTCGATCCGGCGCTGGCGCCCGCCTTCCTCACCCTTGCGCTGGTGCCGGGTGATCTGAAGGCGCT
GGAGCGCCTTAAGGACCCCTTCGCCCGCGTGGGCGGCCTCTCCGCCCTGCGCCGGCAGTGGACGCTCTGGCGGGCCTCGG
CGCGCACGCGCTGA

Upstream 100 bases:

>100_bases
CATGCCCACCTCTGCCGCCGCCGCCACCTACAATGTGCTGCTCGGGGAAGGGCGGCTGGTGGGGGCGGGGCTCGTTGCCC
TGTGACCGGGGGCCTCGTTC

Downstream 100 bases:

>100_bases
AGGGCGACCCGCCCCGTCAGGCGGCCGGGCGGGTGATGCGGTCCGTGAGATTGAGACGGCCGCGCGCGATGTCTGCCACC
AGCGTGCGGGTATCATCGTC

Product: phytoene synthase

Products: diphosphate; prephytoene diphosphate

Alternate protein names: Phytoene Synthase; Phytoene Synthase Protein; Squalene Synthase HpnD; Squalene And Phytoene Synthases Superfamily; Phytoene Desaturase; Terpenoid Synthase; Geranylgeranyl-Diphosphate Geranylgeranyltransferase; Squalene; Phytoene/Squalene Synthetase-Like Protein; Squalene Synthase HpnC; Phytoene Synthase Family Protein; Squalene-Phytoene Synthase

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSLPPDFGVPPALAATPAAASDYAYCTDLVRAQDRDRFLAALFAPADKRQDLFALYAFNVEVARVREVVREALPGEVRLQ
WWRELIEGHGRGEVGGHPVASALLGTIGRYSLPRGALLNLIEARVFDLYDDPMPSMNDLEGYAGETASALLQLSAHILGG
GPRPALANACGHGGVAIALAGLMRALPVHAARGQCFLPLDVLKRHGSSRDEVVARKPTPGILATLADLRTQAARHLMEAE
KALAGLDPALAPAFLTLALVPGDLKALERLKDPFARVGGLSALRRQWTLWRASARTR

Sequences:

>Translated_297_residues
MSLPPDFGVPPALAATPAAASDYAYCTDLVRAQDRDRFLAALFAPADKRQDLFALYAFNVEVARVREVVREALPGEVRLQ
WWRELIEGHGRGEVGGHPVASALLGTIGRYSLPRGALLNLIEARVFDLYDDPMPSMNDLEGYAGETASALLQLSAHILGG
GPRPALANACGHGGVAIALAGLMRALPVHAARGQCFLPLDVLKRHGSSRDEVVARKPTPGILATLADLRTQAARHLMEAE
KALAGLDPALAPAFLTLALVPGDLKALERLKDPFARVGGLSALRRQWTLWRASARTR
>Mature_296_residues
SLPPDFGVPPALAATPAAASDYAYCTDLVRAQDRDRFLAALFAPADKRQDLFALYAFNVEVARVREVVREALPGEVRLQW
WRELIEGHGRGEVGGHPVASALLGTIGRYSLPRGALLNLIEARVFDLYDDPMPSMNDLEGYAGETASALLQLSAHILGGG
PRPALANACGHGGVAIALAGLMRALPVHAARGQCFLPLDVLKRHGSSRDEVVARKPTPGILATLADLRTQAARHLMEAEK
ALAGLDPALAPAFLTLALVPGDLKALERLKDPFARVGGLSALRRQWTLWRASARTR

Specific function: Unknown

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI124517691, Length=267, Percent_Identity=32.2097378277154, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI25150675, Length=245, Percent_Identity=29.7959183673469, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24641447, Length=276, Percent_Identity=28.9855072463768, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.5.1.32

Molecular weight: Translated: 31853; Mature: 31722

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPPDFGVPPALAATPAAASDYAYCTDLVRAQDRDRFLAALFAPADKRQDLFALYAFNV
CCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEHHHHCH
EVARVREVVREALPGEVRLQWWRELIEGHGRGEVGGHPVASALLGTIGRYSLPRGALLNL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
IEARVFDLYDDPMPSMNDLEGYAGETASALLQLSAHILGGGPRPALANACGHGGVAIALA
HHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHH
GLMRALPVHAARGQCFLPLDVLKRHGSSRDEVVARKPTPGILATLADLRTQAARHLMEAE
HHHHHHHHHHCCCCEEECHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KALAGLDPALAPAFLTLALVPGDLKALERLKDPFARVGGLSALRRQWTLWRASARTR
HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLPPDFGVPPALAATPAAASDYAYCTDLVRAQDRDRFLAALFAPADKRQDLFALYAFNV
CCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEHHHHCH
EVARVREVVREALPGEVRLQWWRELIEGHGRGEVGGHPVASALLGTIGRYSLPRGALLNL
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
IEARVFDLYDDPMPSMNDLEGYAGETASALLQLSAHILGGGPRPALANACGHGGVAIALA
HHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHH
GLMRALPVHAARGQCFLPLDVLKRHGSSRDEVVARKPTPGILATLADLRTQAARHLMEAE
HHHHHHHHHHCCCCEEECHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
KALAGLDPALAPAFLTLALVPGDLKALERLKDPFARVGGLSALRRQWTLWRASARTR
HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: geranylgeranyl diphosphate

Specific reaction: 2 geranylgeranyl diphosphate = diphosphate + prephytoene diphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA