| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is npd
Identifier: 158424491
GI number: 158424491
Start: 3265188
End: 3266183
Strand: Reverse
Name: npd
Synonym: AZC_2867
Alternate gene names: NA
Gene position: 3266183-3265188 (Counterclockwise)
Preceding gene: 158424492
Following gene: 158424490
Centisome position: 60.83
GC content: 69.18
Gene sequence:
>996_bases ATGAGCACGCGCCGCCCGCTGCCCCCGGCGCTGGAGGGCCGCCTGCGGCTTCCGGTCATTGCCTCGCCCATGTTCATCGT GTCGGGGCCGGAGCTTGTCATTGCCGAGTGCCTGTCGGGCGTCGTCGGCTCCTTCCCGGCGCTCAATGCCCGTGCGCCCG ACACGCTGGACGGCTGGCTCACCACCATCAAGACGCGCCTTGCGGAGGCGCAGGCGGCCGATCCTGGCCGGCGCATCGCC CCCTTCGCGGTGAACCAGATCGTCCACGCTTCCAATGACCGTCTGGAGCGGGACATGGAGACCTGCGTCGCCCATGAAGT GCCGCTCATCATCACCTCCCTGCGGCCGCCGGGTGATGTGGTGCGGCAGGCCCATTCCTATGGCGGGCTGGTCTTTCACG ACGTGATCAGCGTGCGCCATGCGGAGAAGGCGCTGGAGGCGGGCGTGGATGGACTGATTCTCGTCTGCGCCGGCGCGGGC GGTCATGCGGGCACGCTCAGCCCCTTCGCGCTTCTGGGCGAGGTGCGCCGCTTCTATGACGGGCCGATCGCCCTGTCCGG CTCCATCACCACGGGCGACGCGATCCTCGCGGCGCAGGCCATGGGGGCCGACTTCGCTTACATGGGCACGCGCTTCATCG CCACGGCGGAGGCCAATGCGGCCGCCCGCTACAAGGAGATGATCACCGAGAGCGCGGCGGCGGACATTCTCTACACGCCT TACTTCACCGGCGTTCCGGGCAATTATCTCAAGCCCTCCATCGTGGCCTCGGGCCTCGATCCGGATGCGCTGCCCCATGC GGACAAGTCGTCCATGAACTTCGGCTCCGGCCGGGTGAAGGCGTGGAAGGATGTGTGGGGCGCGGGGCAGGGAGTCGGCA CCATTGGCGACGTGCCCCCGGTGGCGCAGGTGGTGGACCGTCTCGCGCACGAATATGCCACGGCGCGCGAGCGCCTCGCG GCCACCGCGGCCCGCTTTGCCGGAGGAGAAGCCTGA
Upstream 100 bases:
>100_bases ACCTCATCCGCTCCGGCAAGGTGGTGATGTCCGAACCGGCGGCCGGCATCGATCTCGACCGGCTGCACGATCTCTATTTC GCCCGCGAAGGCGCGGCAGC
Downstream 100 bases:
>100_bases TGACCGAGAGCCTGCTCCTCAGCGATCCCCAGCCGGGCGTGCGCCTTCTCACCATCAATCGGCCGCAGCGGCGCAATGCG CTGGACCGGGCGACCTATGG
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Enoyl-[Acyl-Carrier-Protein] Reductase; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; 2-Nitropropane Dioxygenase-Like Protein; Enoyl-(Acyl-Carrier-Protein) Reductase; Trans-2-Enoyl-ACP Reductase II; Dioxygenase Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase-Releated Protein; Enoyl-ACP Reductase; 2-Nitropropane Dioxygenase Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd; Enoyl-ACP Reductase II
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSTRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWLTTIKTRLAEAQAADPGRRIA PFAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDVVRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAG GHAGTLSPFALLGEVRRFYDGPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTP YFTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPPVAQVVDRLAHEYATARERLA ATAARFAGGEA
Sequences:
>Translated_331_residues MSTRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWLTTIKTRLAEAQAADPGRRIA PFAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDVVRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAG GHAGTLSPFALLGEVRRFYDGPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTP YFTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPPVAQVVDRLAHEYATARERLA ATAARFAGGEA >Mature_330_residues STRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWLTTIKTRLAEAQAADPGRRIAP FAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDVVRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAGG HAGTLSPFALLGEVRRFYDGPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTPY FTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPPVAQVVDRLAHEYATARERLAA TAARFAGGEA
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34707; Mature: 34576
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWL CCCCCCCCHHHCCCEECCEEECCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH TTIKTRLAEAQAADPGRRIAPFAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDV HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH VRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAGGHAGTLSPFALLGEVRRFYD HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHC GPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTP CCEEEECCCCCCHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCEEECC YFTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPP EECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCH VAQVVDRLAHEYATARERLAATAARFAGGEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWL CCCCCCCHHHCCCEECCEEECCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH TTIKTRLAEAQAADPGRRIAPFAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDV HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH VRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAGGHAGTLSPFALLGEVRRFYD HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHC GPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTP CCEEEECCCCCCHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCEEECC YFTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPP EECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCH VAQVVDRLAHEYATARERLAATAARFAGGEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA