Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is npd

Identifier: 158424491

GI number: 158424491

Start: 3265188

End: 3266183

Strand: Reverse

Name: npd

Synonym: AZC_2867

Alternate gene names: NA

Gene position: 3266183-3265188 (Counterclockwise)

Preceding gene: 158424492

Following gene: 158424490

Centisome position: 60.83

GC content: 69.18

Gene sequence:

>996_bases
ATGAGCACGCGCCGCCCGCTGCCCCCGGCGCTGGAGGGCCGCCTGCGGCTTCCGGTCATTGCCTCGCCCATGTTCATCGT
GTCGGGGCCGGAGCTTGTCATTGCCGAGTGCCTGTCGGGCGTCGTCGGCTCCTTCCCGGCGCTCAATGCCCGTGCGCCCG
ACACGCTGGACGGCTGGCTCACCACCATCAAGACGCGCCTTGCGGAGGCGCAGGCGGCCGATCCTGGCCGGCGCATCGCC
CCCTTCGCGGTGAACCAGATCGTCCACGCTTCCAATGACCGTCTGGAGCGGGACATGGAGACCTGCGTCGCCCATGAAGT
GCCGCTCATCATCACCTCCCTGCGGCCGCCGGGTGATGTGGTGCGGCAGGCCCATTCCTATGGCGGGCTGGTCTTTCACG
ACGTGATCAGCGTGCGCCATGCGGAGAAGGCGCTGGAGGCGGGCGTGGATGGACTGATTCTCGTCTGCGCCGGCGCGGGC
GGTCATGCGGGCACGCTCAGCCCCTTCGCGCTTCTGGGCGAGGTGCGCCGCTTCTATGACGGGCCGATCGCCCTGTCCGG
CTCCATCACCACGGGCGACGCGATCCTCGCGGCGCAGGCCATGGGGGCCGACTTCGCTTACATGGGCACGCGCTTCATCG
CCACGGCGGAGGCCAATGCGGCCGCCCGCTACAAGGAGATGATCACCGAGAGCGCGGCGGCGGACATTCTCTACACGCCT
TACTTCACCGGCGTTCCGGGCAATTATCTCAAGCCCTCCATCGTGGCCTCGGGCCTCGATCCGGATGCGCTGCCCCATGC
GGACAAGTCGTCCATGAACTTCGGCTCCGGCCGGGTGAAGGCGTGGAAGGATGTGTGGGGCGCGGGGCAGGGAGTCGGCA
CCATTGGCGACGTGCCCCCGGTGGCGCAGGTGGTGGACCGTCTCGCGCACGAATATGCCACGGCGCGCGAGCGCCTCGCG
GCCACCGCGGCCCGCTTTGCCGGAGGAGAAGCCTGA

Upstream 100 bases:

>100_bases
ACCTCATCCGCTCCGGCAAGGTGGTGATGTCCGAACCGGCGGCCGGCATCGATCTCGACCGGCTGCACGATCTCTATTTC
GCCCGCGAAGGCGCGGCAGC

Downstream 100 bases:

>100_bases
TGACCGAGAGCCTGCTCCTCAGCGATCCCCAGCCGGGCGTGCGCCTTCTCACCATCAATCGGCCGCAGCGGCGCAATGCG
CTGGACCGGGCGACCTATGG

Product: 2-nitropropane dioxygenase

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Enoyl-[Acyl-Carrier-Protein] Reductase; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; 2-Nitropropane Dioxygenase-Like Protein; Enoyl-(Acyl-Carrier-Protein) Reductase; Trans-2-Enoyl-ACP Reductase II; Dioxygenase Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase-Releated Protein; Enoyl-ACP Reductase; 2-Nitropropane Dioxygenase Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd; Enoyl-ACP Reductase II

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSTRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWLTTIKTRLAEAQAADPGRRIA
PFAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDVVRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAG
GHAGTLSPFALLGEVRRFYDGPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTP
YFTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPPVAQVVDRLAHEYATARERLA
ATAARFAGGEA

Sequences:

>Translated_331_residues
MSTRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWLTTIKTRLAEAQAADPGRRIA
PFAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDVVRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAG
GHAGTLSPFALLGEVRRFYDGPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTP
YFTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPPVAQVVDRLAHEYATARERLA
ATAARFAGGEA
>Mature_330_residues
STRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWLTTIKTRLAEAQAADPGRRIAP
FAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDVVRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAGG
HAGTLSPFALLGEVRRFYDGPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTPY
FTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPPVAQVVDRLAHEYATARERLAA
TAARFAGGEA

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34707; Mature: 34576

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWL
CCCCCCCCHHHCCCEECCEEECCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
TTIKTRLAEAQAADPGRRIAPFAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH
VRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAGGHAGTLSPFALLGEVRRFYD
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
GPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTP
CCEEEECCCCCCHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCEEECC
YFTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPP
EECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCH
VAQVVDRLAHEYATARERLAATAARFAGGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STRRPLPPALEGRLRLPVIASPMFIVSGPELVIAECLSGVVGSFPALNARAPDTLDGWL
CCCCCCCHHHCCCEECCEEECCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
TTIKTRLAEAQAADPGRRIAPFAVNQIVHASNDRLERDMETCVAHEVPLIITSLRPPGDV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH
VRQAHSYGGLVFHDVISVRHAEKALEAGVDGLILVCAGAGGHAGTLSPFALLGEVRRFYD
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
GPIALSGSITTGDAILAAQAMGADFAYMGTRFIATAEANAAARYKEMITESAAADILYTP
CCEEEECCCCCCHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCEEECC
YFTGVPGNYLKPSIVASGLDPDALPHADKSSMNFGSGRVKAWKDVWGAGQGVGTIGDVPP
EECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCH
VAQVVDRLAHEYATARERLAATAARFAGGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA