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The map label for this gene is gatC

Identifier: 158424467

GI number: 158424467

Start: 3237318

End: 3237605

Strand: Direct

Name: gatC

Synonym: AZC_2843

Alternate gene names: 158424467

Gene position: 3237318-3237605 (Clockwise)

Preceding gene: 158424466

Following gene: 158424468

Centisome position: 60.29

GC content: 64.93

Gene sequence:

>288_bases
ATGTCCGTCGATCAGGCGACCGTCCGCCGGGTGGCGCATCTCGCGCGCATCGCGGTGAGTGAGGAGGAGCTGGAGCCGCT
CAAGGGCGAGCTCAACGCCATCCTCGCCTTCGTGGAGCAACTGGCCAATCTCGACGTGGCCGACGTGGAGCCCATGACCG
GCGTCATCCCCATGGAACTGCCCATGCGCGAGGACGTGGTCACCGACGGCCACTATCCCGAGAAGATCCTCGCCAATGCC
CCGGAAGCCGAAGGCGGCTTCTTCACTGTTCCGAAGGTGGTGGAATGA

Upstream 100 bases:

>100_bases
GTGTGTTCCGAAGCCGGTGGGTCATGCGTCTGGCCCCGGCATGAGGCTTTCACCCGCCCGATGCCCTTGCTATAGCGGCC
TTAGTTTTAAGGAGCATGTC

Downstream 100 bases:

>100_bases
CCGCGCTCAACCAGCTCACCCTCACCGAAGCGCGCGAGGGCCTCGCCACCGGCGAGTTCACGGCGGTCGAACTGACGCAG
TCCTATCTCGACGCCATGGC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSVDQATVRRVAHLARIAVSEEELEPLKGELNAILAFVEQLANLDVADVEPMTGVIPMELPMREDVVTDGHYPEKILANA
PEAEGGFFTVPKVVE

Sequences:

>Translated_95_residues
MSVDQATVRRVAHLARIAVSEEELEPLKGELNAILAFVEQLANLDVADVEPMTGVIPMELPMREDVVTDGHYPEKILANA
PEAEGGFFTVPKVVE
>Mature_94_residues
SVDQATVRRVAHLARIAVSEEELEPLKGELNAILAFVEQLANLDVADVEPMTGVIPMELPMREDVVTDGHYPEKILANAP
EAEGGFFTVPKVVE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_AZOC5 (A8I9X4)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001525759.1
- ProteinModelPortal:   A8I9X4
- SMR:   A8I9X4
- GeneID:   5688455
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_2843
- HOGENOM:   HBG586403
- OMA:   SVTPMAM
- ProtClustDB:   PRK00034
- BioCyc:   ACAU438753:AZC_2843-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10369; Mature: 10238

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDQATVRRVAHLARIAVSEEELEPLKGELNAILAFVEQLANLDVADVEPMTGVIPMEL
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PMREDVVTDGHYPEKILANAPEAEGGFFTVPKVVE
CCCCCCCCCCCCCHHHHCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
SVDQATVRRVAHLARIAVSEEELEPLKGELNAILAFVEQLANLDVADVEPMTGVIPMEL
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PMREDVVTDGHYPEKILANAPEAEGGFFTVPKVVE
CCCCCCCCCCCCCHHHHCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA