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The map label for this gene is yfdE [H]

Identifier: 158424423

GI number: 158424423

Start: 3180103

End: 3181269

Strand: Reverse

Name: yfdE [H]

Synonym: AZC_2799

Alternate gene names: 158424423

Gene position: 3181269-3180103 (Counterclockwise)

Preceding gene: 158424429

Following gene: 158424422

Centisome position: 59.24

GC content: 68.98

Gene sequence:

>1167_bases
ATGAGCGGTCCTCTGGAGGGGCTGAAGGTCCTCGAACTCGCCCGCATCCTCGCCGGCCCCTGGGTGGGGCAGGTGCTCGC
CGATCTCGGCGCGGACGTGGTGAAGGTGGAAAGCCCGGACGGCGACGACACCCGCACCTGGGGCCCGCCCTTCGTGCCCG
CGGCCGATGGGGGCGATCTTTCCGCCGCCTATTTCCATGCGGCCAATCGCGGCAAGAAGTCCGTGGTCATCGACTTCCGC
ACCCCCGAGGGGCAGGAGGAGGTGCGCCGCCTCGCCGCCAAGGCGGACGTGCTGGTGGAGAACTTCAAGGTCGGCGGCCT
GAAGAAATACGGGCTCGACGCCGAGAGCCTGAAGGCGGTGAACCCGCGCCTCATCTATTGCTCCATCACCGGCTTCGGCC
AGACCGGGCCCTACGCGGAGCGGGCGGGCTACGACTATCTGGTGCAGGGCATGGGCGGGATCATGTCGCTCACCGGCGAG
CCGGCGGGCGAGCCCATGAAGGTGGGCGTCGCCTTCGCCGACATCTACACCGGCCTGTACGCCACCGTGGGCATCCTTTC
GGCGCTGCGGCGGCGGGATGCGACGGGGCAGGGCGCGGTGGTGGACATGGCGCTGCTGGATTGCCAGGTGGGCGTGCTCG
CCAACCAGGCCATGAACTATCTGGTCAGCGGCAAGGCGCCGGCCCGGCTCGGCAATGCCCATCCCAACATCGTGCCCTAT
CAGGTCTTCCCGGTGGCGGATGGCTATGTGATCATCGCGGTGGGCAATGACGGGCAGTTCCGGCGTTTCTGCACCGTGCT
CGGCATCCCGGAGACCGGCACCGACCCCGACTATGCCACGAATCGGGACCGGGTCCGTAATCGGGCGGCGCTGGGCGCGA
TTCTCAGCGAACGCATGGCCACCTTCCAGAAGGCGGACCTGCTGGCGAAGCTGGAGGCGGAAGGCGTGCCGGCCGGCCCG
ATCAATACGCTGGACGAGGTCTTCGCCGATCCGCAGGTGATCGCGCGGGGTCTGCGCATCGACATGGAGGCGCCCGATGC
CGCCGGTGGCACCGTCCCGGGTGTGCGCACGCCGATCACCATCGACGGCGAGCCGATGGTTTCGGGCCAGCCGTCGCCCG
AACTCGGTTCGCACACCGCGGCGTTCAAGGCCGGCGAGCTCTGGTGA

Upstream 100 bases:

>100_bases
CCGCCGGTTCCATTCTGGCGCGAGGTCATTGTGGAAGAAGGCGTTCCATGTCGTTTTGTCCGTGCTCCGTCGTCGCGTCC
AGTCACCTGGGAGGGCGCCC

Downstream 100 bases:

>100_bases
AACCCGCGCGCCAGGGGCCGCAAGCCCTTCATAGCGCGAAAAATGTCAGGCACGCTGCCCTTTCAGGCAGCGTGCCTTTT
CCTTGTGCTTGACACGGATG

Product: acyl-CoA transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSGPLEGLKVLELARILAGPWVGQVLADLGADVVKVESPDGDDTRTWGPPFVPAADGGDLSAAYFHAANRGKKSVVIDFR
TPEGQEEVRRLAAKADVLVENFKVGGLKKYGLDAESLKAVNPRLIYCSITGFGQTGPYAERAGYDYLVQGMGGIMSLTGE
PAGEPMKVGVAFADIYTGLYATVGILSALRRRDATGQGAVVDMALLDCQVGVLANQAMNYLVSGKAPARLGNAHPNIVPY
QVFPVADGYVIIAVGNDGQFRRFCTVLGIPETGTDPDYATNRDRVRNRAALGAILSERMATFQKADLLAKLEAEGVPAGP
INTLDEVFADPQVIARGLRIDMEAPDAAGGTVPGVRTPITIDGEPMVSGQPSPELGSHTAAFKAGELW

Sequences:

>Translated_388_residues
MSGPLEGLKVLELARILAGPWVGQVLADLGADVVKVESPDGDDTRTWGPPFVPAADGGDLSAAYFHAANRGKKSVVIDFR
TPEGQEEVRRLAAKADVLVENFKVGGLKKYGLDAESLKAVNPRLIYCSITGFGQTGPYAERAGYDYLVQGMGGIMSLTGE
PAGEPMKVGVAFADIYTGLYATVGILSALRRRDATGQGAVVDMALLDCQVGVLANQAMNYLVSGKAPARLGNAHPNIVPY
QVFPVADGYVIIAVGNDGQFRRFCTVLGIPETGTDPDYATNRDRVRNRAALGAILSERMATFQKADLLAKLEAEGVPAGP
INTLDEVFADPQVIARGLRIDMEAPDAAGGTVPGVRTPITIDGEPMVSGQPSPELGSHTAAFKAGELW
>Mature_387_residues
SGPLEGLKVLELARILAGPWVGQVLADLGADVVKVESPDGDDTRTWGPPFVPAADGGDLSAAYFHAANRGKKSVVIDFRT
PEGQEEVRRLAAKADVLVENFKVGGLKKYGLDAESLKAVNPRLIYCSITGFGQTGPYAERAGYDYLVQGMGGIMSLTGEP
AGEPMKVGVAFADIYTGLYATVGILSALRRRDATGQGAVVDMALLDCQVGVLANQAMNYLVSGKAPARLGNAHPNIVPYQ
VFPVADGYVIIAVGNDGQFRRFCTVLGIPETGTDPDYATNRDRVRNRAALGAILSERMATFQKADLLAKLEAEGVPAGPI
NTLDEVFADPQVIARGLRIDMEAPDAAGGTVPGVRTPITIDGEPMVSGQPSPELGSHTAAFKAGELW

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=378, Percent_Identity=44.4444444444444, Blast_Score=328, Evalue=7e-90,
Organism=Homo sapiens, GI300863124, Length=404, Percent_Identity=41.5841584158416, Blast_Score=314, Evalue=1e-85,
Organism=Homo sapiens, GI13376042, Length=404, Percent_Identity=38.1188118811881, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI300863126, Length=378, Percent_Identity=39.1534391534392, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI266456254, Length=380, Percent_Identity=27.6315789473684, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI42794625, Length=381, Percent_Identity=27.5590551181102, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI266458397, Length=206, Percent_Identity=34.9514563106796, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI266458393, Length=206, Percent_Identity=34.9514563106796, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI42822893, Length=182, Percent_Identity=34.6153846153846, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI266458395, Length=182, Percent_Identity=34.6153846153846, Blast_Score=97, Evalue=3e-20,
Organism=Escherichia coli, GI87082093, Length=362, Percent_Identity=39.7790055248619, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1788717, Length=408, Percent_Identity=31.3725490196078, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1786222, Length=387, Percent_Identity=24.031007751938, Blast_Score=99, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI115535051, Length=259, Percent_Identity=32.4324324324324, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI32564160, Length=206, Percent_Identity=32.5242718446602, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24648431, Length=377, Percent_Identity=43.7665782493369, Blast_Score=302, Evalue=2e-82,
Organism=Drosophila melanogaster, GI24585488, Length=207, Percent_Identity=32.8502415458937, Blast_Score=117, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 40883; Mature: 40752

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPLEGLKVLELARILAGPWVGQVLADLGADVVKVESPDGDDTRTWGPPFVPAADGGDL
CCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
SAAYFHAANRGKKSVVIDFRTPEGQEEVRRLAAKADVLVENFKVGGLKKYGLDAESLKAV
HHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHCC
NPRLIYCSITGFGQTGPYAERAGYDYLVQGMGGIMSLTGEPAGEPMKVGVAFADIYTGLY
CCEEEEEEEECCCCCCCCHHHCCHHHHHHCCCCEEEECCCCCCCCEEEHHHHHHHHHHHH
ATVGILSALRRRDATGQGAVVDMALLDCQVGVLANQAMNYLVSGKAPARLGNAHPNIVPY
HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
QVFPVADGYVIIAVGNDGQFRRFCTVLGIPETGTDPDYATNRDRVRNRAALGAILSERMA
EEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TFQKADLLAKLEAEGVPAGPINTLDEVFADPQVIARGLRIDMEAPDAAGGTVPGVRTPIT
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCEEECCCCCCCCCCCCCCCCCEE
IDGEPMVSGQPSPELGSHTAAFKAGELW
ECCCCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
SGPLEGLKVLELARILAGPWVGQVLADLGADVVKVESPDGDDTRTWGPPFVPAADGGDL
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
SAAYFHAANRGKKSVVIDFRTPEGQEEVRRLAAKADVLVENFKVGGLKKYGLDAESLKAV
HHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHCC
NPRLIYCSITGFGQTGPYAERAGYDYLVQGMGGIMSLTGEPAGEPMKVGVAFADIYTGLY
CCEEEEEEEECCCCCCCCHHHCCHHHHHHCCCCEEEECCCCCCCCEEEHHHHHHHHHHHH
ATVGILSALRRRDATGQGAVVDMALLDCQVGVLANQAMNYLVSGKAPARLGNAHPNIVPY
HHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
QVFPVADGYVIIAVGNDGQFRRFCTVLGIPETGTDPDYATNRDRVRNRAALGAILSERMA
EEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TFQKADLLAKLEAEGVPAGPINTLDEVFADPQVIARGLRIDMEAPDAAGGTVPGVRTPIT
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCEEECCCCCCCCCCCCCCCCCEE
IDGEPMVSGQPSPELGSHTAAFKAGELW
ECCCCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]