Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158424385

Identifier: 158424385

GI number: 158424385

Start: 3138742

End: 3141018

Strand: Reverse

Name: 158424385

Synonym: AZC_2761

Alternate gene names: NA

Gene position: 3141018-3138742 (Counterclockwise)

Preceding gene: 158424387

Following gene: 158424384

Centisome position: 58.49

GC content: 67.76

Gene sequence:

>2277_bases
GTGCGCGTTGGCCTGCTGTCGGGCGGTGCGGAAAAACGCTCCGTTCCGTTCATCCACCGCCCGTTGTGCTTGAACCGCCA
CGGCTCAAACGCACCCGATGGAGCCATGAACCTGCAGCACATGCCCGATGGCAGCGAAGAGCCGCTCTTCGACGTTGCTT
CCCACGGTCCGCCCTCCCGTCCGCGCGGGACACTCAAACAGGGCGACACCTTCGCGGTCTTTGATCTTTATGGCGACATG
GGGGTGTCCGTGGGCATGCCCGACGGCATCTATCACGCCGACACGCGCCACCTGTGCCTCTGGTCGCTGAGCATTGGCGG
TGAGGAGCCGCTGTTCCTCGGCTCGACCATTCTCGACGGCAATGCCGGGCTGGCCGTCGATCTCACCAATCCGGACATTC
ACGGCGGCGCGCAGAAGCTCATCCCCAAGGATACGCTGCATGTGGTGCGCTTCTTCTTTCTCTGGCAGGACGCCGCGCAC
GAGCGCTGCTCCATCCAGAACCACGGCAGCGCGCCGGTCGATCTCGTCTTCACCTACAGGTTCGATGCCGACTTCATTGA
TCTGTTCGAGGCGCGTGGCGCCAGGCGCAAGGCGCGCGGGCTGCCGCTGCCGCCGGTGATGCAGCCGGGGCGCGTGGAAC
TGGGATATCGGGCGCTCGATGGCGTCGAGGCACGCACCCGCGTGGAGTTCCGCCCGACGCCCGAGACCCTGACCGCGGGA
CGCGCCGACTTCCGGGTGAAGCTCGCACCGGGCGAGCGGACATCCCTCTTTGCCACCATCGCCGCCGGCCCGCAGGGCGA
AGCGATGCGGCGGCCCTTCCTCCAGAGCCTCCAGCAGGCCTGCCGCGCGACACGCGCCATCCGCTCGGACATGGCGTCCA
TCGTCTCGTCCAATGCTCGCGTCAACGACGTGCTGGAGCGCTCTGCGGCCGACGTCGCGATGCTGCTCACCCCGACGCCG
CAGGGTCTTTATCCCTATGCCGGCATCCCGTGGTACTCGACCACATTCGGCCGTGACGGCCTCCTCACGGCCTTGTCCAT
GCTGTGGGCGGACCCCGGCATAGCCTGCGGCGTGCTGAAGCGTCTGGCAGACCTTCAGGCGACCGAAACGGATCCCGAGG
CGGATGCCGAGCCCGGCAAGATTCTCCACGAGATGCGCGGCGGCGAAATGGCCCGCATGAAGGAGGTGCCGTTCGCCCGC
TATTACGGCAGCGTCGATTCAACCCCGCTCTTTGTTCTGTTGGCGGGGCGCTATTACGAGCGGACCGGCGACCTTGAGAC
ATTGCGTGGCCTCTGGCCCGCCATCCTCGCCGCGCTTGGCTGGATCAACGGTGCCGGCGACCGGGATCGCGACGGCTTCC
TCGAATATCACCGCGCGACCGAGACCGGCCTTTCCAACCAGGGCTGGAAGGATTCTTTCGACAGCACCTTCCACGCCGAC
GGGCGGCTGGCGGAAGGGCCCATCGCCCTCGTCGAGGTGCAGGCCTATGTGTATGCGGCCAAGGTCTCGCTGGCGCGGGT
CGCCCACGATCTCGGGGATGCCGACCTTGCGACGGGCCTCGCCTTGGAAGCGGCGACGCTGGCGGAGCGGTTCGAGGCCC
ACTTCTGGTGCCCGGACATGGGCACCTATGCGCTGGCGCTCGATGGCCAAAAGTCCCCGTGCCGGGTGGCCACGTCCAAT
CCGGGTCACGCCCTCTTCTCGGGCATCGTGCGGGAGGACCGTGCGGCCTCCGTCATCGGCCGCCTCATGGACGCGGACAG
CTTCTCCGGCTGGGGAATCCGCACGGTGGCGCGGACAGAGGCGCGCTATAATCCCATGTCCTATCACAACGGCTCAATCT
GGCCCCACGACAATGCAGTGGCGGCTCTCGGCATGGCCCGGTACGGACACACGCAAGCGGCGGTGAACGTACTGGAGGCG
CTGCTCGATGCGGGGTGCAGCCTGCCGCTCGGGCGCCTTCCGGAGCTCTATTGCGGCTTCCGGCGGCGCAAGGGCCGGGG
GCCGACCCTCTATCCGGTGGCATGTGCCCCGCAGGCCTGGGCGAGCGCCGCGATCTTCGCGGGCGTGCAGGCCTGCCTCG
GCATCGATTTCCGGCCGGAGACGGAAGAGGTGATCTTCCGACGCCCCCGGCTGCCCCCGTCCATTTCCGAGCTTTCCCTC
AAAAACCTGCGGGTCGGCCGTACGGAACTCGACGTGACCGTGCAGCGGCGGGGCGAGGACGTGGCGGTTGGCGTCGACCG
CCGGGTTGGCCACGGGCAGGCGGTGGTCCTCCTGTGA

Upstream 100 bases:

>100_bases
GCAAAGCAAAGCTGAATCGGGGGGGGGGGGGTGCCGGCGCTGATCCATCAGCTTTTCGTCGCAGAGGCGGGCATCCCCAC
GTCGGGAACCAAGCTGCGCC

Downstream 100 bases:

>100_bases
GGCTGCGCCCGCCCGTCGCGCAACACCAATCGAGAGGATGACCCATGCGCCGATCCCGTGCCGCCCGACTGAAGATCATG
CTCGTCGCGGCGGGAATGAT

Product: Amylo-alpha-1,6-glucosidase

Products: NA

Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Glycogen Debranching -Like Protein; Amylo-Alpha-1 6-Glucosidase Family Protein

Number of amino acids: Translated: 758; Mature: 758

Protein sequence:

>758_residues
MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSRPRGTLKQGDTFAVFDLYGDM
GVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDGNAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAH
ERCSIQNHGSAPVDLVFTYRFDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG
RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNARVNDVLERSAADVAMLLTPTP
QGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLKRLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFAR
YYGSVDSTPLFVLLAGRYYERTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD
GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDMGTYALALDGQKSPCRVATSN
PGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTEARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEA
LLDAGCSLPLGRLPELYCGFRRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL
KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL

Sequences:

>Translated_758_residues
MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSRPRGTLKQGDTFAVFDLYGDM
GVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDGNAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAH
ERCSIQNHGSAPVDLVFTYRFDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG
RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNARVNDVLERSAADVAMLLTPTP
QGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLKRLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFAR
YYGSVDSTPLFVLLAGRYYERTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD
GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDMGTYALALDGQKSPCRVATSN
PGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTEARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEA
LLDAGCSLPLGRLPELYCGFRRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL
KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL
>Mature_758_residues
MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSRPRGTLKQGDTFAVFDLYGDM
GVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDGNAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAH
ERCSIQNHGSAPVDLVFTYRFDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG
RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNARVNDVLERSAADVAMLLTPTP
QGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLKRLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFAR
YYGSVDSTPLFVLLAGRYYERTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD
GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDMGTYALALDGQKSPCRVATSN
PGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTEARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEA
LLDAGCSLPLGRLPELYCGFRRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL
KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82410; Mature: 82410

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSR
CEEEEECCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PRGTLKQGDTFAVFDLYGDMGVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDG
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCEEECCEEECC
NAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAHERCSIQNHGSAPVDLVFTYR
CCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
FDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG
ECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCHHHCCCCCCEEEEECCCCHHHHCC
RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNAR
CCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VNDVLERSAADVAMLLTPTPQGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLK
HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
RLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFARYYGSVDSTPLFVLLAGRYYE
HHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCEEEEEECHHHH
RTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDM
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCC
GTYALALDGQKSPCRVATSNPGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTE
CCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH
ARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEALLDAGCSLPLGRLPELYCGF
HHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL
HHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHH
KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL
HHEECCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEC
>Mature Secondary Structure
MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSR
CEEEEECCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
PRGTLKQGDTFAVFDLYGDMGVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDG
CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCEEECCEEECC
NAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAHERCSIQNHGSAPVDLVFTYR
CCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
FDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG
ECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCHHHCCCCCCEEEEECCCCHHHHCC
RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNAR
CCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VNDVLERSAADVAMLLTPTPQGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLK
HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
RLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFARYYGSVDSTPLFVLLAGRYYE
HHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCEEEEEECHHHH
RTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDM
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCC
GTYALALDGQKSPCRVATSNPGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTE
CCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH
ARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEALLDAGCSLPLGRLPELYCGF
HHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
RRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL
HHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHH
KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL
HHEECCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA