| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424385
Identifier: 158424385
GI number: 158424385
Start: 3138742
End: 3141018
Strand: Reverse
Name: 158424385
Synonym: AZC_2761
Alternate gene names: NA
Gene position: 3141018-3138742 (Counterclockwise)
Preceding gene: 158424387
Following gene: 158424384
Centisome position: 58.49
GC content: 67.76
Gene sequence:
>2277_bases GTGCGCGTTGGCCTGCTGTCGGGCGGTGCGGAAAAACGCTCCGTTCCGTTCATCCACCGCCCGTTGTGCTTGAACCGCCA CGGCTCAAACGCACCCGATGGAGCCATGAACCTGCAGCACATGCCCGATGGCAGCGAAGAGCCGCTCTTCGACGTTGCTT CCCACGGTCCGCCCTCCCGTCCGCGCGGGACACTCAAACAGGGCGACACCTTCGCGGTCTTTGATCTTTATGGCGACATG GGGGTGTCCGTGGGCATGCCCGACGGCATCTATCACGCCGACACGCGCCACCTGTGCCTCTGGTCGCTGAGCATTGGCGG TGAGGAGCCGCTGTTCCTCGGCTCGACCATTCTCGACGGCAATGCCGGGCTGGCCGTCGATCTCACCAATCCGGACATTC ACGGCGGCGCGCAGAAGCTCATCCCCAAGGATACGCTGCATGTGGTGCGCTTCTTCTTTCTCTGGCAGGACGCCGCGCAC GAGCGCTGCTCCATCCAGAACCACGGCAGCGCGCCGGTCGATCTCGTCTTCACCTACAGGTTCGATGCCGACTTCATTGA TCTGTTCGAGGCGCGTGGCGCCAGGCGCAAGGCGCGCGGGCTGCCGCTGCCGCCGGTGATGCAGCCGGGGCGCGTGGAAC TGGGATATCGGGCGCTCGATGGCGTCGAGGCACGCACCCGCGTGGAGTTCCGCCCGACGCCCGAGACCCTGACCGCGGGA CGCGCCGACTTCCGGGTGAAGCTCGCACCGGGCGAGCGGACATCCCTCTTTGCCACCATCGCCGCCGGCCCGCAGGGCGA AGCGATGCGGCGGCCCTTCCTCCAGAGCCTCCAGCAGGCCTGCCGCGCGACACGCGCCATCCGCTCGGACATGGCGTCCA TCGTCTCGTCCAATGCTCGCGTCAACGACGTGCTGGAGCGCTCTGCGGCCGACGTCGCGATGCTGCTCACCCCGACGCCG CAGGGTCTTTATCCCTATGCCGGCATCCCGTGGTACTCGACCACATTCGGCCGTGACGGCCTCCTCACGGCCTTGTCCAT GCTGTGGGCGGACCCCGGCATAGCCTGCGGCGTGCTGAAGCGTCTGGCAGACCTTCAGGCGACCGAAACGGATCCCGAGG CGGATGCCGAGCCCGGCAAGATTCTCCACGAGATGCGCGGCGGCGAAATGGCCCGCATGAAGGAGGTGCCGTTCGCCCGC TATTACGGCAGCGTCGATTCAACCCCGCTCTTTGTTCTGTTGGCGGGGCGCTATTACGAGCGGACCGGCGACCTTGAGAC ATTGCGTGGCCTCTGGCCCGCCATCCTCGCCGCGCTTGGCTGGATCAACGGTGCCGGCGACCGGGATCGCGACGGCTTCC TCGAATATCACCGCGCGACCGAGACCGGCCTTTCCAACCAGGGCTGGAAGGATTCTTTCGACAGCACCTTCCACGCCGAC GGGCGGCTGGCGGAAGGGCCCATCGCCCTCGTCGAGGTGCAGGCCTATGTGTATGCGGCCAAGGTCTCGCTGGCGCGGGT CGCCCACGATCTCGGGGATGCCGACCTTGCGACGGGCCTCGCCTTGGAAGCGGCGACGCTGGCGGAGCGGTTCGAGGCCC ACTTCTGGTGCCCGGACATGGGCACCTATGCGCTGGCGCTCGATGGCCAAAAGTCCCCGTGCCGGGTGGCCACGTCCAAT CCGGGTCACGCCCTCTTCTCGGGCATCGTGCGGGAGGACCGTGCGGCCTCCGTCATCGGCCGCCTCATGGACGCGGACAG CTTCTCCGGCTGGGGAATCCGCACGGTGGCGCGGACAGAGGCGCGCTATAATCCCATGTCCTATCACAACGGCTCAATCT GGCCCCACGACAATGCAGTGGCGGCTCTCGGCATGGCCCGGTACGGACACACGCAAGCGGCGGTGAACGTACTGGAGGCG CTGCTCGATGCGGGGTGCAGCCTGCCGCTCGGGCGCCTTCCGGAGCTCTATTGCGGCTTCCGGCGGCGCAAGGGCCGGGG GCCGACCCTCTATCCGGTGGCATGTGCCCCGCAGGCCTGGGCGAGCGCCGCGATCTTCGCGGGCGTGCAGGCCTGCCTCG GCATCGATTTCCGGCCGGAGACGGAAGAGGTGATCTTCCGACGCCCCCGGCTGCCCCCGTCCATTTCCGAGCTTTCCCTC AAAAACCTGCGGGTCGGCCGTACGGAACTCGACGTGACCGTGCAGCGGCGGGGCGAGGACGTGGCGGTTGGCGTCGACCG CCGGGTTGGCCACGGGCAGGCGGTGGTCCTCCTGTGA
Upstream 100 bases:
>100_bases GCAAAGCAAAGCTGAATCGGGGGGGGGGGGGTGCCGGCGCTGATCCATCAGCTTTTCGTCGCAGAGGCGGGCATCCCCAC GTCGGGAACCAAGCTGCGCC
Downstream 100 bases:
>100_bases GGCTGCGCCCGCCCGTCGCGCAACACCAATCGAGAGGATGACCCATGCGCCGATCCCGTGCCGCCCGACTGAAGATCATG CTCGTCGCGGCGGGAATGAT
Product: Amylo-alpha-1,6-glucosidase
Products: NA
Alternate protein names: Amylo-Alpha-1 6-Glucosidase; Glycogen Debranching; Glycogen Debranching Protein; Amylo-Alpha-1 6-Glucosidase Family; Glycogen Debranching Family Protein; LOW QUALITY PROTEIN Amylo-Alpha-1 6-Glucosidase; Neutral Invertase; Glycoside Transferase; Amylo-Alpha-1 6-Glucosidase Protein; Glycogen Debranching -Like Protein; Amylo-Alpha-1 6-Glucosidase Family Protein
Number of amino acids: Translated: 758; Mature: 758
Protein sequence:
>758_residues MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSRPRGTLKQGDTFAVFDLYGDM GVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDGNAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAH ERCSIQNHGSAPVDLVFTYRFDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNARVNDVLERSAADVAMLLTPTP QGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLKRLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFAR YYGSVDSTPLFVLLAGRYYERTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDMGTYALALDGQKSPCRVATSN PGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTEARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEA LLDAGCSLPLGRLPELYCGFRRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL
Sequences:
>Translated_758_residues MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSRPRGTLKQGDTFAVFDLYGDM GVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDGNAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAH ERCSIQNHGSAPVDLVFTYRFDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNARVNDVLERSAADVAMLLTPTP QGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLKRLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFAR YYGSVDSTPLFVLLAGRYYERTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDMGTYALALDGQKSPCRVATSN PGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTEARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEA LLDAGCSLPLGRLPELYCGFRRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL >Mature_758_residues MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSRPRGTLKQGDTFAVFDLYGDM GVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDGNAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAH ERCSIQNHGSAPVDLVFTYRFDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNARVNDVLERSAADVAMLLTPTP QGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLKRLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFAR YYGSVDSTPLFVLLAGRYYERTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDMGTYALALDGQKSPCRVATSN PGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTEARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEA LLDAGCSLPLGRLPELYCGFRRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL
Specific function: Unknown
COG id: COG3408
COG function: function code G; Glycogen debranching enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82410; Mature: 82410
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSR CEEEEECCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC PRGTLKQGDTFAVFDLYGDMGVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDG CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCEEECCEEECC NAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAHERCSIQNHGSAPVDLVFTYR CCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE FDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG ECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCHHHCCCCCCEEEEECCCCHHHHCC RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNAR CCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VNDVLERSAADVAMLLTPTPQGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLK HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH RLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFARYYGSVDSTPLFVLLAGRYYE HHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCEEEEEECHHHH RTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDM CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCC GTYALALDGQKSPCRVATSNPGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTE CCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH ARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEALLDAGCSLPLGRLPELYCGF HHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL HHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHH KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL HHEECCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEC >Mature Secondary Structure MRVGLLSGGAEKRSVPFIHRPLCLNRHGSNAPDGAMNLQHMPDGSEEPLFDVASHGPPSR CEEEEECCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC PRGTLKQGDTFAVFDLYGDMGVSVGMPDGIYHADTRHLCLWSLSIGGEEPLFLGSTILDG CCCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCCEEECCEEECC NAGLAVDLTNPDIHGGAQKLIPKDTLHVVRFFFLWQDAAHERCSIQNHGSAPVDLVFTYR CCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE FDADFIDLFEARGARRKARGLPLPPVMQPGRVELGYRALDGVEARTRVEFRPTPETLTAG ECCHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCHHHCCCCCCEEEEECCCCHHHHCC RADFRVKLAPGERTSLFATIAAGPQGEAMRRPFLQSLQQACRATRAIRSDMASIVSSNAR CCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH VNDVLERSAADVAMLLTPTPQGLYPYAGIPWYSTTFGRDGLLTALSMLWADPGIACGVLK HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH RLADLQATETDPEADAEPGKILHEMRGGEMARMKEVPFARYYGSVDSTPLFVLLAGRYYE HHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCEEEEEECHHHH RTGDLETLRGLWPAILAALGWINGAGDRDRDGFLEYHRATETGLSNQGWKDSFDSTFHAD CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GRLAEGPIALVEVQAYVYAAKVSLARVAHDLGDADLATGLALEAATLAERFEAHFWCPDM CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCC GTYALALDGQKSPCRVATSNPGHALFSGIVREDRAASVIGRLMDADSFSGWGIRTVARTE CCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHH ARYNPMSYHNGSIWPHDNAVAALGMARYGHTQAAVNVLEALLDAGCSLPLGRLPELYCGF HHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RRRKGRGPTLYPVACAPQAWASAAIFAGVQACLGIDFRPETEEVIFRRPRLPPSISELSL HHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHH KNLRVGRTELDVTVQRRGEDVAVGVDRRVGHGQAVVLL HHEECCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA