| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158424383
Identifier: 158424383
GI number: 158424383
Start: 3136618
End: 3137871
Strand: Reverse
Name: 158424383
Synonym: AZC_2759
Alternate gene names: NA
Gene position: 3137871-3136618 (Counterclockwise)
Preceding gene: 158424384
Following gene: 158424381
Centisome position: 58.44
GC content: 68.98
Gene sequence:
>1254_bases GTGCATGAGCCCCGCTCCCGACTGCCCGATCCCCCGCATGACGGCACCTCGCCCTCCCGGCGCAGCAGGCGGGGGCTCGA CTGGTTCGTCTTCTGTGTGGCGGACATCCAGACAGGCTTCGGCCCCTTCGTGGCGGTGTTCCTGACCACGCAGAAGTGGA CGCAGCTCGATATCGGCCTCGTGCTCACCATCAGCGGCCTTGTCAGCCTCTTCGGGCAGATCCCCTTCGGCGCGCTGGTG GACGCGCTCGGCGCCCTGCGCCGCACGGCGATGGTCGCGCTGATCGCCATCGGCATCAGCGCCGTCCTGTTCGCCGCATG GCCCATCTTTCCCGTGGTGCTGGCCTCGCGCGTGCTCCACGCTGCCGCGAGCAGCGTGTTGGGATTGTGCTTGGTGTCGC TGAGTCTTGGCCTTGTGGGGGCGGGCGGGATCAGCGCACGCCTTGGCCGCAACGCCGCCTTCGCGTCGGCGGGCACCGGC GTGGCCGCGCTCACCATGGGCGCGGTCGGCTATTATGTTTCGAACCACGCTGTGTTCTTTCTCGCCGCCGCGCTGGTCAT CCCCGCACTTCATGCGCTCTTCAGCATCGACGGCCGCGAGATCGCGCCGCCCGCGCCGCCGCAGCCGGGCGAAGGGCGGG GCTGGCGCACAACCCTCTCGGGTCTCCGGCATCTGGCTGCCAACCGGCCGCTGCTGATCTTCTGCGGCTGCGTGGTCACC TTCCATCTCGCCAATGCCGCTATGTTGCCGCTGGCCGCCAGCATGCTCACCCTGCGCTCCAGCGAGGCGGCGACGCTCAT GGTGGCCGCCGCGATGGTGGTGCCGCAGTTCACGGTGACGCTGCTGTCCCCCTTCGTCGGGCAGGGGGCGCAATCGTGGG GGCGCAAGCCGCTGCTGATCGTCGGATTTGCCGCACTTGTGCTGCGCGGCGTCTGCTTCGCGTTGACGTCCGAACCTTAC ATCCTCGTGGCCATTCAGGTGCTGGATGGCATTTCGGCAGCGGTCCTCGGCGTGCTTGTGCCGCTGACGGTGGCCGACGT GGCGCGCGGGCCCCACTTCAATCTCGCGCAGGGCACGGTGGGTTGCGCCATGGGCATCGGCGCCTCCATCAGCACCGTTC TCAGCGGCTATATGGCGGACACCTGGGGCAGTTATACCGCCTTCATGGGGATGGCAGCCGTTGCGATGCTGGGACTCGGG GGCGTCGCGATGCTGATGCCGGAGACGCGCGACCGCACGCCCGAGGCGGCCTGA
Upstream 100 bases:
>100_bases CCGAAGCCCTGAACCGGCGACGCGGTGACGCCGTGGCCGGAAGGCGTATGTCCGGTTCGCACTGGACCCGCATTTCTCGC GGACGAGGAACCTTTGCGAC
Downstream 100 bases:
>100_bases TCCACAAACAAAAGGGGAGCCGCTCGGGCTCCCCTCGGATCGTTCTCAGCCCGCGGAGACAAGATGGGGTCGCATGCGGC CCCGGTCCATGAGGCGTCGG
Product: major facilitator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MHEPRSRLPDPPHDGTSPSRRSRRGLDWFVFCVADIQTGFGPFVAVFLTTQKWTQLDIGLVLTISGLVSLFGQIPFGALV DALGALRRTAMVALIAIGISAVLFAAWPIFPVVLASRVLHAAASSVLGLCLVSLSLGLVGAGGISARLGRNAAFASAGTG VAALTMGAVGYYVSNHAVFFLAAALVIPALHALFSIDGREIAPPAPPQPGEGRGWRTTLSGLRHLAANRPLLIFCGCVVT FHLANAAMLPLAASMLTLRSSEAATLMVAAAMVVPQFTVTLLSPFVGQGAQSWGRKPLLIVGFAALVLRGVCFALTSEPY ILVAIQVLDGISAAVLGVLVPLTVADVARGPHFNLAQGTVGCAMGIGASISTVLSGYMADTWGSYTAFMGMAAVAMLGLG GVAMLMPETRDRTPEAA
Sequences:
>Translated_417_residues MHEPRSRLPDPPHDGTSPSRRSRRGLDWFVFCVADIQTGFGPFVAVFLTTQKWTQLDIGLVLTISGLVSLFGQIPFGALV DALGALRRTAMVALIAIGISAVLFAAWPIFPVVLASRVLHAAASSVLGLCLVSLSLGLVGAGGISARLGRNAAFASAGTG VAALTMGAVGYYVSNHAVFFLAAALVIPALHALFSIDGREIAPPAPPQPGEGRGWRTTLSGLRHLAANRPLLIFCGCVVT FHLANAAMLPLAASMLTLRSSEAATLMVAAAMVVPQFTVTLLSPFVGQGAQSWGRKPLLIVGFAALVLRGVCFALTSEPY ILVAIQVLDGISAAVLGVLVPLTVADVARGPHFNLAQGTVGCAMGIGASISTVLSGYMADTWGSYTAFMGMAAVAMLGLG GVAMLMPETRDRTPEAA >Mature_417_residues MHEPRSRLPDPPHDGTSPSRRSRRGLDWFVFCVADIQTGFGPFVAVFLTTQKWTQLDIGLVLTISGLVSLFGQIPFGALV DALGALRRTAMVALIAIGISAVLFAAWPIFPVVLASRVLHAAASSVLGLCLVSLSLGLVGAGGISARLGRNAAFASAGTG VAALTMGAVGYYVSNHAVFFLAAALVIPALHALFSIDGREIAPPAPPQPGEGRGWRTTLSGLRHLAANRPLLIFCGCVVT FHLANAAMLPLAASMLTLRSSEAATLMVAAAMVVPQFTVTLLSPFVGQGAQSWGRKPLLIVGFAALVLRGVCFALTSEPY ILVAIQVLDGISAAVLGVLVPLTVADVARGPHFNLAQGTVGCAMGIGASISTVLSGYMADTWGSYTAFMGMAAVAMLGLG GVAMLMPETRDRTPEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43099; Mature: 43099
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEPRSRLPDPPHDGTSPSRRSRRGLDWFVFCVADIQTGFGPFVAVFLTTQKWTQLDIGL CCCCCCCCCCCCCCCCCCCHHHHCCCCEEEHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH VLTISGLVSLFGQIPFGALVDALGALRRTAMVALIAIGISAVLFAAWPIFPVVLASRVLH HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAASSVLGLCLVSLSLGLVGAGGISARLGRNAAFASAGTGVAALTMGAVGYYVSNHAVFF HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH LAAALVIPALHALFSIDGREIAPPAPPQPGEGRGWRTTLSGLRHLAANRPLLIFCGCVVT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHH FHLANAAMLPLAASMLTLRSSEAATLMVAAAMVVPQFTVTLLSPFVGQGAQSWGRKPLLI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHH VGFAALVLRGVCFALTSEPYILVAIQVLDGISAAVLGVLVPLTVADVARGPHFNLAQGTV HHHHHHHHHHHHHHHCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH GCAMGIGASISTVLSGYMADTWGSYTAFMGMAAVAMLGLGGVAMLMPETRDRTPEAA HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MHEPRSRLPDPPHDGTSPSRRSRRGLDWFVFCVADIQTGFGPFVAVFLTTQKWTQLDIGL CCCCCCCCCCCCCCCCCCCHHHHCCCCEEEHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH VLTISGLVSLFGQIPFGALVDALGALRRTAMVALIAIGISAVLFAAWPIFPVVLASRVLH HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAASSVLGLCLVSLSLGLVGAGGISARLGRNAAFASAGTGVAALTMGAVGYYVSNHAVFF HHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH LAAALVIPALHALFSIDGREIAPPAPPQPGEGRGWRTTLSGLRHLAANRPLLIFCGCVVT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHH FHLANAAMLPLAASMLTLRSSEAATLMVAAAMVVPQFTVTLLSPFVGQGAQSWGRKPLLI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHH VGFAALVLRGVCFALTSEPYILVAIQVLDGISAAVLGVLVPLTVADVARGPHFNLAQGTV HHHHHHHHHHHHHHHCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH GCAMGIGASISTVLSGYMADTWGSYTAFMGMAAVAMLGLGGVAMLMPETRDRTPEAA HHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]