| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158424379
Identifier: 158424379
GI number: 158424379
Start: 3130855
End: 3131649
Strand: Reverse
Name: 158424379
Synonym: AZC_2755
Alternate gene names: NA
Gene position: 3131649-3130855 (Counterclockwise)
Preceding gene: 158424380
Following gene: 158424376
Centisome position: 58.32
GC content: 57.61
Gene sequence:
>795_bases ATGATGCGTATTCAGAGCTTATGGACTCGCGTCTTCGCTACTGCGACGCTGGTCGCTGCGGTGGTCTGGCCCCTCACGGC ACAAGCGCAAGCCCCGATGGTCAATCTGACCGATCCCTGCCCGATCAAGGCTGAGAACTGGCGCGGCAGAGCTTTCTACG AGATTTTGTTCATGTTCCGCCAGCCTGACGGTGGCGGGATCGGCAACTACTTCAACTCACTCAGCAACAAACTTCCCAAG TCCAAAGACGTGATGGACGCGCGTTTCCGCGCTCTGAATGCGGAGACCTTGAAGAAGGAGTTCGGGGGCGACGGGGTCTT CTTCAATGGCCCGCGTCGTCTGGTGGCGAACACCATAACCGGAATGTCCTGGGACGGCTGCAAGCAAAGAGTGATCGCCG GGATTCCCTTGAATCTGGACGGTGTCTTTGAAGTCCCGAGCTTGGAGAAGTTCGTTTCGGGATCGATGCCGGCCTATAAG CCGATGGTTTCAAAACGAACCAGTTCTATGCTCTTCAAGGCGGGCGAGACGGTGTACGAGCTCATCACGCCCGAGGGCGC CGTCTACACCATGTTCAGTTTGTCCTTGAAGATCGACCCCAAGAACACCATCGAAAACCTGCCCACATTGGGCAAGCGCC TGACCTTGCCGGCCGGATGGCAGTTCAGATCGCGCAAGCTGGACAAGGACATGGTCCTGACGGCCACGGCCGACTCCAAT CCACCCAATACGGTCGTTCTCGATCAGCTTGAGGGCAACTACCAGTACAACGCTGGCGCCAGCGCCAAGAAGTAG
Upstream 100 bases:
>100_bases TCAACGGTGGGCGTCGACTGATCGCTAGAAATATAAAATTGCGGCGCGCGTCTCCATTGGAAGTCTCGATCCCGCAACCA CCCAACCGGAAGGATCGGTC
Downstream 100 bases:
>100_bases GCGGTTGGCATCAGGTGCATGGCGGCGCCTCTGCTTCGAGAGCAAAAGGACGCAGGTTCAAATCCTGGCGCTCCGACCAT TGTCCGCGCAACGGCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MMRIQSLWTRVFATATLVAAVVWPLTAQAQAPMVNLTDPCPIKAENWRGRAFYEILFMFRQPDGGGIGNYFNSLSNKLPK SKDVMDARFRALNAETLKKEFGGDGVFFNGPRRLVANTITGMSWDGCKQRVIAGIPLNLDGVFEVPSLEKFVSGSMPAYK PMVSKRTSSMLFKAGETVYELITPEGAVYTMFSLSLKIDPKNTIENLPTLGKRLTLPAGWQFRSRKLDKDMVLTATADSN PPNTVVLDQLEGNYQYNAGASAKK
Sequences:
>Translated_264_residues MMRIQSLWTRVFATATLVAAVVWPLTAQAQAPMVNLTDPCPIKAENWRGRAFYEILFMFRQPDGGGIGNYFNSLSNKLPK SKDVMDARFRALNAETLKKEFGGDGVFFNGPRRLVANTITGMSWDGCKQRVIAGIPLNLDGVFEVPSLEKFVSGSMPAYK PMVSKRTSSMLFKAGETVYELITPEGAVYTMFSLSLKIDPKNTIENLPTLGKRLTLPAGWQFRSRKLDKDMVLTATADSN PPNTVVLDQLEGNYQYNAGASAKK >Mature_264_residues MMRIQSLWTRVFATATLVAAVVWPLTAQAQAPMVNLTDPCPIKAENWRGRAFYEILFMFRQPDGGGIGNYFNSLSNKLPK SKDVMDARFRALNAETLKKEFGGDGVFFNGPRRLVANTITGMSWDGCKQRVIAGIPLNLDGVFEVPSLEKFVSGSMPAYK PMVSKRTSSMLFKAGETVYELITPEGAVYTMFSLSLKIDPKNTIENLPTLGKRLTLPAGWQFRSRKLDKDMVLTATADSN PPNTVVLDQLEGNYQYNAGASAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29218; Mature: 29218
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRIQSLWTRVFATATLVAAVVWPLTAQAQAPMVNLTDPCPIKAENWRGRAFYEILFMFR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHC QPDGGGIGNYFNSLSNKLPKSKDVMDARFRALNAETLKKEFGGDGVFFNGPRRLVANTIT CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCCCEEECCCHHHHHHHHC GMSWDGCKQRVIAGIPLNLDGVFEVPSLEKFVSGSMPAYKPMVSKRTSSMLFKAGETVYE CCCCHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHEE LITPEGAVYTMFSLSLKIDPKNTIENLPTLGKRLTLPAGWQFRSRKLDKDMVLTATADSN HHCCCCCEEEEEEEEEEECCHHHHHHHHHCCCEEECCCCCCHHHHCCCCCEEEEEECCCC PPNTVVLDQLEGNYQYNAGASAKK CCCEEEEECCCCCEEECCCCCCCC >Mature Secondary Structure MMRIQSLWTRVFATATLVAAVVWPLTAQAQAPMVNLTDPCPIKAENWRGRAFYEILFMFR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHC QPDGGGIGNYFNSLSNKLPKSKDVMDARFRALNAETLKKEFGGDGVFFNGPRRLVANTIT CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCCCEEECCCHHHHHHHHC GMSWDGCKQRVIAGIPLNLDGVFEVPSLEKFVSGSMPAYKPMVSKRTSSMLFKAGETVYE CCCCHHHHHHEEECCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHEE LITPEGAVYTMFSLSLKIDPKNTIENLPTLGKRLTLPAGWQFRSRKLDKDMVLTATADSN HHCCCCCEEEEEEEEEEECCHHHHHHHHHCCCEEECCCCCCHHHHCCCCCEEEEEECCCC PPNTVVLDQLEGNYQYNAGASAKK CCCEEEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA