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The map label for this gene is 158424311

Identifier: 158424311

GI number: 158424311

Start: 3045654

End: 3046922

Strand: Reverse

Name: 158424311

Synonym: AZC_2687

Alternate gene names: NA

Gene position: 3046922-3045654 (Counterclockwise)

Preceding gene: 158424312

Following gene: 158424310

Centisome position: 56.74

GC content: 69.9

Gene sequence:

>1269_bases
GTGATGTCGCGCTTCGAGGCCAGCTACCTCATCGAGACGCCGCTCGACCCGGTGAAGGTGGCGCAGGTGATGGCGGGCGA
GCAGTCCAGCGGCACCTTCACCCGCGTGCATGGCGAGACGGACGAACTGCGCGCCCGCTCGCGGGCCGAGGTGCTGTCGG
TGGTCGATTTCGGCACCAGTGACACGCCGAGCCTGCCCAATGCCTATCTCGACCGGCGCAGCGTCGCGGGTCCCTACCGG
CGCGCGCGCATCCGCCTCGCCTTTCCGGTGGCGAATGTGGGCGCGAACCTGCCGACGCTGGCGGCAACAGCGGCGGGCAA
CCTGTTCGATCTCGGCGAGGTGACGGGCCTGCGGCTGGAGAGCCTGAGCTTGCCGGACGCCTATCGCCGCGCCTTCGACA
TGCCCCGGCAGGGGCTGGCCGGCACCCGTGCGCTCACCGGCGTGGAGACTGGCCCGCTGGTGGGCTCCATCATCAAGCCG
AACGTCGGCCTCTCCGCCGAGGAAACGGGCGAACTCGTCGGCCAGTTGTGCGCGGCGGGGCTCGATTTCATCAAGGATGA
CGAGATCTGCGCCAACCCCTCCCACGCGCCGTTGGCCGCGCGCGTGCCGGCGGTGATGCGGCGGGTGCGCGATCACGCCG
AGCGCACGGGCAAGAAAGTGATGGTGGCCTTCAACATCACCGATGAGACGGACGCCATGCGCCGCCATGCGGACCTCGTG
GCCCGTGAGGGCGGCACCTGCGTGATGGCGAGCCTCAACTGGTGCGGCTTCTCCGCCATCCAGACCCTGCGGCGGAGCAC
GGATCTGGCCCTGCACGGGCACCGCAACGGCTATGGCGCGCTCTCCCGCGCGCCCCTGCTGGGCATCGGCTTTCAGGCCT
ATCAGGTGCTCTGGCGCCTTGCGGGCGTGGACCACATGCACGTGCATGGGCTCAAGGGGAAATTCGCGCAGGAAGACGCC
GAGGTGATCGAGAGCGCAAGGGATTGCGTGACGCCCCTCTCTTCCTCCGAGGATGATCGGGTGATGCCCGCCTTCTCCTC
CGGCCAGTGGGCCGGCACCGTGCCCGCCACTTATGCCGCCACCGGCCATGCGGACCTGCTCTTCATGGCGGGCGGCGGCA
TCATGGCCCATCCCGATGGGCCTTCTGCCGGCGTCGCGAGCATCCGCGAGGCTTGGGAAGCTGTCATGGCCGGGGAGGGG
TTGCCCGAGGCGGCGCAGCGCGCTCCCGCGCTCGCCAAGGCGCTCGCCTTCTTCGGCTCTGGAGCCTGA

Upstream 100 bases:

>100_bases
CCGAAGGGCAAGCTGTTCAAGATGATCCGCGAAGCCTCGCAGGGCTGGGACGGCACCGATCCCGTCCGCCCCTTCCCCGA
TCTCTCCACGCTGTGAGGCG

Downstream 100 bases:

>100_bases
AGCCGATGGCGCCGCGCTACGGCTGGTATGGCGACGATTTCACGGGGGCCAGTGATACGCTCGCCGTGCTGGCCCAGCGC
GGGCAGAAGACGCTGCTGTT

Product: ribulose-bisphosphate carboxylase

Products: 3-phospho-D-glycerate; H+

Alternate protein names: RuBisCO-like protein [H]

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MMSRFEASYLIETPLDPVKVAQVMAGEQSSGTFTRVHGETDELRARSRAEVLSVVDFGTSDTPSLPNAYLDRRSVAGPYR
RARIRLAFPVANVGANLPTLAATAAGNLFDLGEVTGLRLESLSLPDAYRRAFDMPRQGLAGTRALTGVETGPLVGSIIKP
NVGLSAEETGELVGQLCAAGLDFIKDDEICANPSHAPLAARVPAVMRRVRDHAERTGKKVMVAFNITDETDAMRRHADLV
AREGGTCVMASLNWCGFSAIQTLRRSTDLALHGHRNGYGALSRAPLLGIGFQAYQVLWRLAGVDHMHVHGLKGKFAQEDA
EVIESARDCVTPLSSSEDDRVMPAFSSGQWAGTVPATYAATGHADLLFMAGGGIMAHPDGPSAGVASIREAWEAVMAGEG
LPEAAQRAPALAKALAFFGSGA

Sequences:

>Translated_422_residues
MMSRFEASYLIETPLDPVKVAQVMAGEQSSGTFTRVHGETDELRARSRAEVLSVVDFGTSDTPSLPNAYLDRRSVAGPYR
RARIRLAFPVANVGANLPTLAATAAGNLFDLGEVTGLRLESLSLPDAYRRAFDMPRQGLAGTRALTGVETGPLVGSIIKP
NVGLSAEETGELVGQLCAAGLDFIKDDEICANPSHAPLAARVPAVMRRVRDHAERTGKKVMVAFNITDETDAMRRHADLV
AREGGTCVMASLNWCGFSAIQTLRRSTDLALHGHRNGYGALSRAPLLGIGFQAYQVLWRLAGVDHMHVHGLKGKFAQEDA
EVIESARDCVTPLSSSEDDRVMPAFSSGQWAGTVPATYAATGHADLLFMAGGGIMAHPDGPSAGVASIREAWEAVMAGEG
LPEAAQRAPALAKALAFFGSGA
>Mature_422_residues
MMSRFEASYLIETPLDPVKVAQVMAGEQSSGTFTRVHGETDELRARSRAEVLSVVDFGTSDTPSLPNAYLDRRSVAGPYR
RARIRLAFPVANVGANLPTLAATAAGNLFDLGEVTGLRLESLSLPDAYRRAFDMPRQGLAGTRALTGVETGPLVGSIIKP
NVGLSAEETGELVGQLCAAGLDFIKDDEICANPSHAPLAARVPAVMRRVRDHAERTGKKVMVAFNITDETDAMRRHADLV
AREGGTCVMASLNWCGFSAIQTLRRSTDLALHGHRNGYGALSRAPLLGIGFQAYQVLWRLAGVDHMHVHGLKGKFAQEDA
EVIESARDCVTPLSSSEDDRVMPAFSSGQWAGTVPATYAATGHADLLFMAGGGIMAHPDGPSAGVASIREAWEAVMAGEG
LPEAAQRAPALAKALAFFGSGA

Specific function: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity [H]

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020878
- InterPro:   IPR000685
- InterPro:   IPR017443 [H]

Pfam domain/function: PF00016 RuBisCO_large [H]

EC number: 4.1.1.39

Molecular weight: Translated: 44721; Mature: 44721

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS00157 RUBISCO_LARGE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSRFEASYLIETPLDPVKVAQVMAGEQSSGTFTRVHGETDELRARSRAEVLSVVDFGTS
CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC
DTPSLPNAYLDRRSVAGPYRRARIRLAFPVANVGANLPTLAATAAGNLFDLGEVTGLRLE
CCCCCCHHHHHHHHCCCCHHHEEEEEEEEHHHCCCCCCHHHHHHCCCCEECCCCCCCEEE
SLSLPDAYRRAFDMPRQGLAGTRALTGVETGPLVGSIIKPNVGLSAEETGELVGQLCAAG
CCCCCHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH
LDFIKDDEICANPSHAPLAARVPAVMRRVRDHAERTGKKVMVAFNITDETDAMRRHADLV
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH
AREGGTCVMASLNWCGFSAIQTLRRSTDLALHGHRNGYGALSRAPLLGIGFQAYQVLWRL
HCCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCHHCCCEEECCHHHHHHHHHH
AGVDHMHVHGLKGKFAQEDAEVIESARDCVTPLSSSEDDRVMPAFSSGQWAGTVPATYAA
HCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
TGHADLLFMAGGGIMAHPDGPSAGVASIREAWEAVMAGEGLPEAAQRAPALAKALAFFGS
CCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
GA
CC
>Mature Secondary Structure
MMSRFEASYLIETPLDPVKVAQVMAGEQSSGTFTRVHGETDELRARSRAEVLSVVDFGTS
CCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC
DTPSLPNAYLDRRSVAGPYRRARIRLAFPVANVGANLPTLAATAAGNLFDLGEVTGLRLE
CCCCCCHHHHHHHHCCCCHHHEEEEEEEEHHHCCCCCCHHHHHHCCCCEECCCCCCCEEE
SLSLPDAYRRAFDMPRQGLAGTRALTGVETGPLVGSIIKPNVGLSAEETGELVGQLCAAG
CCCCCHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH
LDFIKDDEICANPSHAPLAARVPAVMRRVRDHAERTGKKVMVAFNITDETDAMRRHADLV
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH
AREGGTCVMASLNWCGFSAIQTLRRSTDLALHGHRNGYGALSRAPLLGIGFQAYQVLWRL
HCCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCHHCCCEEECCHHHHHHHHHH
AGVDHMHVHGLKGKFAQEDAEVIESARDCVTPLSSSEDDRVMPAFSSGQWAGTVPATYAA
HCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
TGHADLLFMAGGGIMAHPDGPSAGVASIREAWEAVMAGEGLPEAAQRAPALAKALAFFGS
CCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O

Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]