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The map label for this gene is dppC [H]

Identifier: 158424276

GI number: 158424276

Start: 3004746

End: 3005588

Strand: Direct

Name: dppC [H]

Synonym: AZC_2652

Alternate gene names: 158424276

Gene position: 3004746-3005588 (Clockwise)

Preceding gene: 158424275

Following gene: 158424277

Centisome position: 55.96

GC content: 67.62

Gene sequence:

>843_bases
ATGAACCGGCTTCTCGATTTCTGGCGCCTGTTCCGCCGCAAGCGCACGGCCGTGCTCGGCCTCGTCATCTTCCTCGGCAT
CGTCGCCGCCGCGCTGCTTGCGCCGGTGCTCTATCCGGAAGACCCGGCCGACATGGTGGCCCCGCCGCTGCTGTGGCCCG
GCGAGGACATGGCCTATCCGCTCGGCAGCGACCCCCTCGGCCGCGACATCGCCGCAGGTCTCATGCACGGTGCCCGTAGC
GCCCTCATGATCGGCGGGATTTCCACCCTTGTGGCGCTCGCCATCGGCATCACGGTGGGCGCGCTGTCCGGCTATTACGG
CGGCTGGGTGAACGACACCCTCATGCGCATCACCGAGATGTTCCAGACCATGCCGCAGTTCATCCTGGCGGTGGTTCTGG
TGGCCATCGTGGGGCCGGCGCTCTCCTCGATCATCATCGCGCTGGCGCTGGTCTCATGGCCGCCGGTGGCGCGGCTGGTG
CGGGCGGAGGTGATGAGCCTGCGCGAGCGGGAGTTCGTGCAGTCCTGCTACGCCATCGGCATGAGCGAGCGGTCCATCAT
CTTCGGGCAGATCCTGCCCAACTGCCTCACGCCCATCATCGTCACCGCCTCCATCATGGTGGCCACCGCCATTCTCACCG
AGGCGGGCCTGTCCTTCCTCGGCCTTGGCGATCCCAACGTGGTCACCTGGGGGGCCATGATCGGTGCCGGGCGCGAAAGC
CTGCGCTCGGCCTGGTATCTGGTGGCTGAGCCCGGCCTTGCCATCATCCTCGTGGTGCTGGCCCTCAATCTCGTGGGCGA
GGGGCTGAACGACGCCCTGAACCCCAAGCTGAAGCTGCGCTGA

Upstream 100 bases:

>100_bases
TGCTCATCGGCATCCTGCTTATGAGCTCGGCTCTGGTGATCTTCATCAACATGCTGGTGGATCTCGCCTATTCCTGGCTG
GACCCGAGGATCAAGGCGCG

Downstream 100 bases:

>100_bases
TGTCCGGCGCGCCTTCCCCCTCCCCCGCCGCCCGCCCCGTTCTGGAGGTGCGCGGCCTCACCACCCGCCTCCTCTCCCGC
GCCGGCGAGGTGACGGTCGT

Product: oligopeptide/dipeptide ABC transporter permease component protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNRLLDFWRLFRRKRTAVLGLVIFLGIVAAALLAPVLYPEDPADMVAPPLLWPGEDMAYPLGSDPLGRDIAAGLMHGARS
ALMIGGISTLVALAIGITVGALSGYYGGWVNDTLMRITEMFQTMPQFILAVVLVAIVGPALSSIIIALALVSWPPVARLV
RAEVMSLREREFVQSCYAIGMSERSIIFGQILPNCLTPIIVTASIMVATAILTEAGLSFLGLGDPNVVTWGAMIGAGRES
LRSAWYLVAEPGLAIILVVLALNLVGEGLNDALNPKLKLR

Sequences:

>Translated_280_residues
MNRLLDFWRLFRRKRTAVLGLVIFLGIVAAALLAPVLYPEDPADMVAPPLLWPGEDMAYPLGSDPLGRDIAAGLMHGARS
ALMIGGISTLVALAIGITVGALSGYYGGWVNDTLMRITEMFQTMPQFILAVVLVAIVGPALSSIIIALALVSWPPVARLV
RAEVMSLREREFVQSCYAIGMSERSIIFGQILPNCLTPIIVTASIMVATAILTEAGLSFLGLGDPNVVTWGAMIGAGRES
LRSAWYLVAEPGLAIILVVLALNLVGEGLNDALNPKLKLR
>Mature_280_residues
MNRLLDFWRLFRRKRTAVLGLVIFLGIVAAALLAPVLYPEDPADMVAPPLLWPGEDMAYPLGSDPLGRDIAAGLMHGARS
ALMIGGISTLVALAIGITVGALSGYYGGWVNDTLMRITEMFQTMPQFILAVVLVAIVGPALSSIIIALALVSWPPVARLV
RAEVMSLREREFVQSCYAIGMSERSIIFGQILPNCLTPIIVTASIMVATAILTEAGLSFLGLGDPNVVTWGAMIGAGRES
LRSAWYLVAEPGLAIILVVLALNLVGEGLNDALNPKLKLR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=274, Percent_Identity=36.8613138686131, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1789964, Length=284, Percent_Identity=40.8450704225352, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1787760, Length=246, Percent_Identity=34.5528455284553, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1787498, Length=276, Percent_Identity=34.4202898550725, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=36.9294605809129, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1788505, Length=218, Percent_Identity=31.1926605504587, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787549, Length=275, Percent_Identity=29.0909090909091, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29890; Mature: 29890

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLLDFWRLFRRKRTAVLGLVIFLGIVAAALLAPVLYPEDPADMVAPPLLWPGEDMAYP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC
LGSDPLGRDIAAGLMHGARSALMIGGISTLVALAIGITVGALSGYYGGWVNDTLMRITEM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FQTMPQFILAVVLVAIVGPALSSIIIALALVSWPPVARLVRAEVMSLREREFVQSCYAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
MSERSIIFGQILPNCLTPIIVTASIMVATAILTEAGLSFLGLGDPNVVTWGAMIGAGRES
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHCCHHH
LRSAWYLVAEPGLAIILVVLALNLVGEGLNDALNPKLKLR
HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure
MNRLLDFWRLFRRKRTAVLGLVIFLGIVAAALLAPVLYPEDPADMVAPPLLWPGEDMAYP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC
LGSDPLGRDIAAGLMHGARSALMIGGISTLVALAIGITVGALSGYYGGWVNDTLMRITEM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FQTMPQFILAVVLVAIVGPALSSIIIALALVSWPPVARLVRAEVMSLREREFVQSCYAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
MSERSIIFGQILPNCLTPIIVTASIMVATAILTEAGLSFLGLGDPNVVTWGAMIGAGRES
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHCCHHH
LRSAWYLVAEPGLAIILVVLALNLVGEGLNDALNPKLKLR
HHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]