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The map label for this gene is ompA [H]

Identifier: 158424220

GI number: 158424220

Start: 2925898

End: 2927382

Strand: Direct

Name: ompA [H]

Synonym: AZC_2596

Alternate gene names: 158424220

Gene position: 2925898-2927382 (Clockwise)

Preceding gene: 158424219

Following gene: 158424221

Centisome position: 54.49

GC content: 69.56

Gene sequence:

>1485_bases
ATGGCCAGAGACACTGATCCACAATCGGACGCGGAGACGACCATCGTCGCTCCCGCCGCGCGGTGGCGTGCTCCGGCCAA
TGAGCAACCTGTGTCGCAGGTCGCTCCGGGCCGTGCGGCGCCTGTCGGCACCTTCCCCTTTCCCCGGCCGCCAGGCAGCG
ACGGCCGCCTGAAGCCTGTCGAGCGGGAGGCCCCGCGCAAGGGACCGGCCGCGCCGACCGTGCCGCCCCTGCCGACCGCG
CGCACCGATGACCGTGCCCTCAAGGCGGCGCTTGAGGTCTATCAGGACAATCCGGGCCTTGCGCTCGCCGTTCCGATCTT
CGAGTTGCTGGTGCGGGCGCAGTTGCAGCCCACCGGCGACGCGGACGAGTTCCACGACCACCTGCTCGATGAGCTCCAGA
CCTTCGAGACCCAGGCCATCTCGCGCGGCCTGTCGCAACAGCACACGCGCCTGATCCTCTACGCGATCGCGGCCACGGCC
GACGACTGCATCCTGAACACGCGCTGGGGCAACGAGAGCGACTGGGCGGCGAAGACGCTGGTCTCGGCGCTCTTCCAGGA
AACCTGGGGCGGCGAGCGGTTCTTCGGCCTGCTCAACCAGATGATGGCGGCGCCGCACTCGGTCGTGCGCGAGATCGAAT
TCTACTATTTTTGCCTTCAGTTCGGCTTCGAGGGCAAATACCGCCTCGCCGCCAACGGCAGCGGGGAACTGACGCGGCTC
AAGGACGACGTCTTCCAGTTCCTGCGCAGCGTGCGCGGCGGCGTGAAGCCGGAACTCTCGCCCAACTGGCGCGGCCTTTC
CGCCGAGAACCAGGGCCCCGGCGATCTGCTGCCGCTGGTGTTCTACGGCGCCGGCATCGCGCTCTTCCTGCTGCTGCTGT
TCATCGGCTATTCGCTGGTGCTGCGGCGCGAGGCGAACCTCGCCGTCCAGCAGGTGCAGAACCTCATGGCCGAGCCGGTG
GTCATCCGCACGCCGCCGGTGGCGACGGCGGCCGCCGCCCCGGCACCTGCTCCCACGCCCGCCGCTCCGCCCGCGCCCAA
GCCGCCGGCCGAGACGCCCCTTCAGGTCATCTCCGGCTTCCTGGAGCCCGAGCAGCAGGCCAAGCTCATCACCGTGTTCG
GCCGTGGCAATTCAGTGGTCATCCAAACCCAGCAGGAGCTGTTCGCCTCCGCCAGCACGACCCTGCGCCCACCCTATCCT
GAGGTGATCGCCAAGGTCGCGGCGGCGCTCGCCAAGTTCAAGGGGCCGGTCAACGTGCTGGGCTACACCGACAACGTGCC
CATCCGCACCGCCACCTTCCCGGACAATCTCGCCCTCTCGACGGCCCGCGCCCGCGCGGTGGGACAGGCCCTCGCGGCGG
GCCTCGGCGGCAACGCCCGCATCACGACGGTCGGCAAAGGCGACGCCGACCCCGTCGCGTCCAACGACACGCCGGACGGG
CGGCAGAAGAACCGCCGCGTCGAAATCGTTCTCACGCCGCAATAG

Upstream 100 bases:

>100_bases
GTCACGCTAATCTGGAAGTCGGATCCGGCCGTCGAAACACATGACACGCTCGTGCAACTCAGGCGGATGATGCTTCCGTC
CTGATCACTGGAAGGGAGCC

Downstream 100 bases:

>100_bases
GCCCCGAGCCAAGCCCTGACGATGCAAATGACCCTCACCACATGGACATTCTGGCGCTGGGTGCTGCTGTTCGCCGCGGC
GGCCGTCTTCGCGCTGCTGG

Product: OmpA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MARDTDPQSDAETTIVAPAARWRAPANEQPVSQVAPGRAAPVGTFPFPRPPGSDGRLKPVEREAPRKGPAAPTVPPLPTA
RTDDRALKAALEVYQDNPGLALAVPIFELLVRAQLQPTGDADEFHDHLLDELQTFETQAISRGLSQQHTRLILYAIAATA
DDCILNTRWGNESDWAAKTLVSALFQETWGGERFFGLLNQMMAAPHSVVREIEFYYFCLQFGFEGKYRLAANGSGELTRL
KDDVFQFLRSVRGGVKPELSPNWRGLSAENQGPGDLLPLVFYGAGIALFLLLLFIGYSLVLRREANLAVQQVQNLMAEPV
VIRTPPVATAAAAPAPAPTPAAPPAPKPPAETPLQVISGFLEPEQQAKLITVFGRGNSVVIQTQQELFASASTTLRPPYP
EVIAKVAAALAKFKGPVNVLGYTDNVPIRTATFPDNLALSTARARAVGQALAAGLGGNARITTVGKGDADPVASNDTPDG
RQKNRRVEIVLTPQ

Sequences:

>Translated_494_residues
MARDTDPQSDAETTIVAPAARWRAPANEQPVSQVAPGRAAPVGTFPFPRPPGSDGRLKPVEREAPRKGPAAPTVPPLPTA
RTDDRALKAALEVYQDNPGLALAVPIFELLVRAQLQPTGDADEFHDHLLDELQTFETQAISRGLSQQHTRLILYAIAATA
DDCILNTRWGNESDWAAKTLVSALFQETWGGERFFGLLNQMMAAPHSVVREIEFYYFCLQFGFEGKYRLAANGSGELTRL
KDDVFQFLRSVRGGVKPELSPNWRGLSAENQGPGDLLPLVFYGAGIALFLLLLFIGYSLVLRREANLAVQQVQNLMAEPV
VIRTPPVATAAAAPAPAPTPAAPPAPKPPAETPLQVISGFLEPEQQAKLITVFGRGNSVVIQTQQELFASASTTLRPPYP
EVIAKVAAALAKFKGPVNVLGYTDNVPIRTATFPDNLALSTARARAVGQALAAGLGGNARITTVGKGDADPVASNDTPDG
RQKNRRVEIVLTPQ
>Mature_493_residues
ARDTDPQSDAETTIVAPAARWRAPANEQPVSQVAPGRAAPVGTFPFPRPPGSDGRLKPVEREAPRKGPAAPTVPPLPTAR
TDDRALKAALEVYQDNPGLALAVPIFELLVRAQLQPTGDADEFHDHLLDELQTFETQAISRGLSQQHTRLILYAIAATAD
DCILNTRWGNESDWAAKTLVSALFQETWGGERFFGLLNQMMAAPHSVVREIEFYYFCLQFGFEGKYRLAANGSGELTRLK
DDVFQFLRSVRGGVKPELSPNWRGLSAENQGPGDLLPLVFYGAGIALFLLLLFIGYSLVLRREANLAVQQVQNLMAEPVV
IRTPPVATAAAAPAPAPTPAAPPAPKPPAETPLQVISGFLEPEQQAKLITVFGRGNSVVIQTQQELFASASTTLRPPYPE
VIAKVAAALAKFKGPVNVLGYTDNVPIRTATFPDNLALSTARARAVGQALAAGLGGNARITTVGKGDADPVASNDTPDGR
QKNRRVEIVLTPQ

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=139, Percent_Identity=37.410071942446, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 53061; Mature: 52930

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDTDPQSDAETTIVAPAARWRAPANEQPVSQVAPGRAAPVGTFPFPRPPGSDGRLKPV
CCCCCCCCCCCCCEEEECHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
EREAPRKGPAAPTVPPLPTARTDDRALKAALEVYQDNPGLALAVPIFELLVRAQLQPTGD
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCC
ADEFHDHLLDELQTFETQAISRGLSQQHTRLILYAIAATADDCILNTRWGNESDWAAKTL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEEEHHCCCCCEEECCCCCCCHHHHHHH
VSALFQETWGGERFFGLLNQMMAAPHSVVREIEFYYFCLQFGFEGKYRLAANGSGELTRL
HHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
KDDVFQFLRSVRGGVKPELSPNWRGLSAENQGPGDLLPLVFYGAGIALFLLLLFIGYSLV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRREANLAVQQVQNLMAEPVVIRTPPVATAAAAPAPAPTPAAPPAPKPPAETPLQVISGF
HHHHHHHHHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LEPEQQAKLITVFGRGNSVVIQTQQELFASASTTLRPPYPEVIAKVAAALAKFKGPVNVL
CCCCCCCEEEEEEECCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
GYTDNVPIRTATFPDNLALSTARARAVGQALAAGLGGNARITTVGKGDADPVASNDTPDG
EECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
RQKNRRVEIVLTPQ
CCCCCEEEEEECCC
>Mature Secondary Structure 
ARDTDPQSDAETTIVAPAARWRAPANEQPVSQVAPGRAAPVGTFPFPRPPGSDGRLKPV
CCCCCCCCCCCCEEEECHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
EREAPRKGPAAPTVPPLPTARTDDRALKAALEVYQDNPGLALAVPIFELLVRAQLQPTGD
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCC
ADEFHDHLLDELQTFETQAISRGLSQQHTRLILYAIAATADDCILNTRWGNESDWAAKTL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEEEEHHCCCCCEEECCCCCCCHHHHHHH
VSALFQETWGGERFFGLLNQMMAAPHSVVREIEFYYFCLQFGFEGKYRLAANGSGELTRL
HHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
KDDVFQFLRSVRGGVKPELSPNWRGLSAENQGPGDLLPLVFYGAGIALFLLLLFIGYSLV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRREANLAVQQVQNLMAEPVVIRTPPVATAAAAPAPAPTPAAPPAPKPPAETPLQVISGF
HHHHHHHHHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LEPEQQAKLITVFGRGNSVVIQTQQELFASASTTLRPPYPEVIAKVAAALAKFKGPVNVL
CCCCCCCEEEEEEECCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
GYTDNVPIRTATFPDNLALSTARARAVGQALAAGLGGNARITTVGKGDADPVASNDTPDG
EECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
RQKNRRVEIVLTPQ
CCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]