| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yedZ [H]
Identifier: 158424200
GI number: 158424200
Start: 2902348
End: 2903193
Strand: Reverse
Name: yedZ [H]
Synonym: AZC_2576
Alternate gene names: 158424200
Gene position: 2903193-2902348 (Counterclockwise)
Preceding gene: 158424202
Following gene: 158424198
Centisome position: 54.07
GC content: 69.27
Gene sequence:
>846_bases ATGTCGCTGTTTCACGAGCGCAACGGAAAATTCAGCCCCGAGAAGACGCTGGCCTTGGTCGGTAGCGTGCTGCCGGCCAT CTGGCTCGGTGCGTGGGCGGTGGCGGGCGATCTGGGCGCGCGGCCGGTTTCGGCGGCGATTCACTTTTCCGGCCTCTGGG CCATCCGCCTGCTGCTGGTGAGTCTCGCCGTCACGCCGGCCCGGCGCATCTTCCACTGGCCGAAACTCGTGCTGGCGCGC CGCATCCTCGGCGTCGCCGCCATGTGCTACGCGCTGCTTCACCTCGGCCTCTATGCGATGGACCAGGGCTGGAACGTCGG CACGGTGGCGCGGGAGATCGTGCTGCGCTTCTATCTGACGATCGGTGCGGTGGGCGCCGCCTTCCTCGTGGCGCTCGGCG CCACCTCGTTCGACAGCGTGATCCGCCGGATGGGTGGCAAGCGCTGGAATGCGCTCCACGCCACCGTCTATGGCATCGCC ATCCTCGCCAGCGTGCACTTCTTCATCCAGTCGAAGCTGGATGTGACGGAGGCGGTGCTGACCACCGGCCTGCTGATCTG GCTGTTCGCCTATCGCATCTGGCACCGCCGCACCAATGCGGTCGGCCCGCTGGCTCTGTTCGCGCTGGCGGGCCTCAGCG CCGTGCTGACCGCGCTGCTCGAGATCGCCTGGTATGGCCTCTTCACTGGCGTCAGCCCGTGGCTGGTGGCGCAGGCCAAT GTCCAGCCGGGGCTCGGCATCAGCCCCGCGCTGTGGGTGCTGGCAGCGGGGCTCGGCGTCGCGTTCGCCGGCACGGTGCG CCTCAAGGTGCTTCCGCCCGCGAAGGTGGCGCGGGCGCGCGCCTGA
Upstream 100 bases:
>100_bases GGGCCGGAAGGCTCTCACGCCTTTTTGCGAGGGGCGGCCGTAACAAGGCCACGCGTCATGACGTAGTAGAAGCAGGTTCC GCACGAGGTCAGGTGAGCGC
Downstream 100 bases:
>100_bases TCAGAGGCGAAGCGTCCCGGTCAGTTGATCGAGCGCGGTGTCGGGCGTGCCGCGCATCCAGTCCGGCATCTGGTGGCGGA ACCACGTGACCTGCCGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Flavocytochrome yedZ [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSLFHERNGKFSPEKTLALVGSVLPAIWLGAWAVAGDLGARPVSAAIHFSGLWAIRLLLVSLAVTPARRIFHWPKLVLAR RILGVAAMCYALLHLGLYAMDQGWNVGTVAREIVLRFYLTIGAVGAAFLVALGATSFDSVIRRMGGKRWNALHATVYGIA ILASVHFFIQSKLDVTEAVLTTGLLIWLFAYRIWHRRTNAVGPLALFALAGLSAVLTALLEIAWYGLFTGVSPWLVAQAN VQPGLGISPALWVLAAGLGVAFAGTVRLKVLPPAKVARARA
Sequences:
>Translated_281_residues MSLFHERNGKFSPEKTLALVGSVLPAIWLGAWAVAGDLGARPVSAAIHFSGLWAIRLLLVSLAVTPARRIFHWPKLVLAR RILGVAAMCYALLHLGLYAMDQGWNVGTVAREIVLRFYLTIGAVGAAFLVALGATSFDSVIRRMGGKRWNALHATVYGIA ILASVHFFIQSKLDVTEAVLTTGLLIWLFAYRIWHRRTNAVGPLALFALAGLSAVLTALLEIAWYGLFTGVSPWLVAQAN VQPGLGISPALWVLAAGLGVAFAGTVRLKVLPPAKVARARA >Mature_280_residues SLFHERNGKFSPEKTLALVGSVLPAIWLGAWAVAGDLGARPVSAAIHFSGLWAIRLLLVSLAVTPARRIFHWPKLVLARR ILGVAAMCYALLHLGLYAMDQGWNVGTVAREIVLRFYLTIGAVGAAFLVALGATSFDSVIRRMGGKRWNALHATVYGIAI LASVHFFIQSKLDVTEAVLTTGLLIWLFAYRIWHRRTNAVGPLALFALAGLSAVLTALLEIAWYGLFTGVSPWLVAQANV QPGLGISPALWVLAAGLGVAFAGTVRLKVLPPAKVARARA
Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]
COG id: COG2717
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yedZ family [H]
Homologues:
Organism=Escherichia coli, GI1788283, Length=157, Percent_Identity=38.2165605095541, Blast_Score=95, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013130 - InterPro: IPR022837 [H]
Pfam domain/function: PF01794 Ferric_reduct [H]
EC number: NA
Molecular weight: Translated: 30164; Mature: 30033
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFHERNGKFSPEKTLALVGSVLPAIWLGAWAVAGDLGARPVSAAIHFSGLWAIRLLLV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SLAVTPARRIFHWPKLVLARRILGVAAMCYALLHLGLYAMDQGWNVGTVAREIVLRFYLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IGAVGAAFLVALGATSFDSVIRRMGGKRWNALHATVYGIAILASVHFFIQSKLDVTEAVL HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTGLLIWLFAYRIWHRRTNAVGPLALFALAGLSAVLTALLEIAWYGLFTGVSPWLVAQAN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC VQPGLGISPALWVLAAGLGVAFAGTVRLKVLPPAKVARARA CCCCCCCCHHHHHHHHHHHHHEECEEEEEECCCHHHHHCCC >Mature Secondary Structure SLFHERNGKFSPEKTLALVGSVLPAIWLGAWAVAGDLGARPVSAAIHFSGLWAIRLLLV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SLAVTPARRIFHWPKLVLARRILGVAAMCYALLHLGLYAMDQGWNVGTVAREIVLRFYLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IGAVGAAFLVALGATSFDSVIRRMGGKRWNALHATVYGIAILASVHFFIQSKLDVTEAVL HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTGLLIWLFAYRIWHRRTNAVGPLALFALAGLSAVLTALLEIAWYGLFTGVSPWLVAQAN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC VQPGLGISPALWVLAAGLGVAFAGTVRLKVLPPAKVARARA CCCCCCCCHHHHHHHHHHHHHEECEEEEEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Mo [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA