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The map label for this gene is dcrA [H]

Identifier: 158424188

GI number: 158424188

Start: 2888869

End: 2890722

Strand: Reverse

Name: dcrA [H]

Synonym: AZC_2564

Alternate gene names: 158424188

Gene position: 2890722-2888869 (Counterclockwise)

Preceding gene: 158424189

Following gene: 158424186

Centisome position: 53.83

GC content: 67.42

Gene sequence:

>1854_bases
ATGACCAATGATGGTTTTTATCTGCACTTATCGTGGGCACTTACCGTCGATAGCTTGCTGTGCATGAGAGCGCCAAGCTG
GCGCTACGACGGATGGCTTGCGAGGGTGCCGGGCAAAAGCGACGGCCAACGTTCGCAACAAAACACGGGGGACGCCATGA
GCTACGCAAATCTTCCCATGACCTGGAAGGTGGTGGTTCTGCTCGCGTTGCTGGGGGTGATCAGCCTCGGCGGCGCGCTC
TATTCCACCTCCACCATGTCCAGCATCGACAGCGCATATGGCGAGCTGGCGGACGGTCCGCAGACGGCCATCAACAAGAT
CGCCCGTTCGGCCCGTTCGGCGGCGACCGTCAGCACGGACATCATGCGCGCCATCATCTCCACCTCGGACGATGACAATG
TGAAAGCGGCTGCCGCCCTGAAGGCTTCCATGAAGCGCTTCGGCGAACTGATGGACGAAGGCGCGGACGCCGTGCCGAAC
AAGCGCGCGGAGATCACCCAGTTGCGCGACCGGCTCACCACCGTCGTGGCCAATGAGTGCGGGGAGGTGGTCCGCATCGC
CACCACCGAGACCTCGCTCGATTCCATCGCCCGCGCCGGTGCGCTCATGTCGGCGCGCTGCGAACCGGCCATCAATGCGG
TGATCGCCGCCACCGTCGAGTTCAACGGCAAGCTCACCGCCGAAAGCAATGCCATCCGCGCGACGCTCCAGGCGCAGACC
CGCCACTCGGCCCTGGTGACGTTGCTCGGCATCGCCGGCGCCACCCTCGCCATGATCGCCGTGGCGATCCTGCTGGTGCG
CAGCGGCATCGTCGCTCCGATCCGCACCATGATGGGCGCCATGGCCGACATGGGGCAGGGCAAGCTCGGCACCCCGGTCG
CCGGCACCACCCGCAAGGATGAGATCGGCGCCATGGCGACCTCGCTCGAGCATCTGCGCGGCCAGCTCTCCGAGGCGGAG
GTTCTGCGCCGGGCCCAGCAGGAGCGCGAAGAGGTGGAGCGCCAGACCATGGTCCGGCGCGAGGCGCTGGCCCAGAATTT
CGTCGCCCGCATGAAGGAGCTCGCCTCCAGCTTCGCGGGCTCGTCCGGCGAGGTGGCACACGCCGCCCGCGATCTGTCCG
CTTCGGCCGACCAGACCGCGCAGCAGGCGCAGGCCGTGGCTGCGGCCGCCGAGCAGGCCGCCACCAATGTGCAGACCGTT
GCGGCCTCTTCCGAGGAACTGGCCGCCTCGGTGCGGGAGATCACGGCGCAGGTGAGCCATTCGGCCACGGTCGCGGATCT
CGCCTTCCGCGAGGCCGATGCCTCCAACCAGCGGATCAGCGAACTCGCCCGGGCGGCGGCGGACATCGGCGAGGTCATCA
ACCTCATCAAGTCCATCGCCGACCAGACCAACCTGCTGGCTCTCAACGCCACCATCGAAGCCGCCCGTGCCGGCGACGCG
GGCAAGGGCTTCGCGGTCGTCGCCTCGGAGGTGAAGGAACTGGCCTCCCAGACCGCCAAGGCCACCAGCGACATCTCGCA
GAAGGTGGAGGAGATCCAGTCCGCCACCAACGGCACGGTGGCCTCCATGGCGGAGATCATCCGCGTGGTGACCAACATCA
AGGAGATCTCCTCGGCCATCTCCGGCTCGGTGGCGCAGCAGGGCGAAGCGACGGGCGAGATCGCCCAGAACTGCCAGCAG
GCGTCGACGGGCACGCAGGAAGTGACCGACAACATCACCGGCGTCGGCCGGGCCGCGCAGGCGACGGGGGCGGCCTCCAA
CCAGTTGCTCAGCCTCTCTCAGGGTCTCTCGGCCCAGGCGACGGACCTGCGGTCGGTGGTGGAGACCTTCGTCCGCGACC
TTAACGCTGCGTGA

Upstream 100 bases:

>100_bases
TACTGCTGCGGAACATCGGGCGCGTGCTTATTCTTGCGGCGCAAAAAATATGCAGGCAGTCTTCCAAGATGAACTAAAAA
TAGCACCACATTGGAAATGA

Downstream 100 bases:

>100_bases
GATCAGGAGCGGCGTGCGGGCGCGCGCCGCTCACTCCGGCCAGCCGCCGGGCATGGCCCCGGTGGCGGCGAGGTCCAGCT
TGGCCCGGCGGGGCAGGGCC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MTNDGFYLHLSWALTVDSLLCMRAPSWRYDGWLARVPGKSDGQRSQQNTGDAMSYANLPMTWKVVVLLALLGVISLGGAL
YSTSTMSSIDSAYGELADGPQTAINKIARSARSAATVSTDIMRAIISTSDDDNVKAAAALKASMKRFGELMDEGADAVPN
KRAEITQLRDRLTTVVANECGEVVRIATTETSLDSIARAGALMSARCEPAINAVIAATVEFNGKLTAESNAIRATLQAQT
RHSALVTLLGIAGATLAMIAVAILLVRSGIVAPIRTMMGAMADMGQGKLGTPVAGTTRKDEIGAMATSLEHLRGQLSEAE
VLRRAQQEREEVERQTMVRREALAQNFVARMKELASSFAGSSGEVAHAARDLSASADQTAQQAQAVAAAAEQAATNVQTV
AASSEELAASVREITAQVSHSATVADLAFREADASNQRISELARAAADIGEVINLIKSIADQTNLLALNATIEAARAGDA
GKGFAVVASEVKELASQTAKATSDISQKVEEIQSATNGTVASMAEIIRVVTNIKEISSAISGSVAQQGEATGEIAQNCQQ
ASTGTQEVTDNITGVGRAAQATGAASNQLLSLSQGLSAQATDLRSVVETFVRDLNAA

Sequences:

>Translated_617_residues
MTNDGFYLHLSWALTVDSLLCMRAPSWRYDGWLARVPGKSDGQRSQQNTGDAMSYANLPMTWKVVVLLALLGVISLGGAL
YSTSTMSSIDSAYGELADGPQTAINKIARSARSAATVSTDIMRAIISTSDDDNVKAAAALKASMKRFGELMDEGADAVPN
KRAEITQLRDRLTTVVANECGEVVRIATTETSLDSIARAGALMSARCEPAINAVIAATVEFNGKLTAESNAIRATLQAQT
RHSALVTLLGIAGATLAMIAVAILLVRSGIVAPIRTMMGAMADMGQGKLGTPVAGTTRKDEIGAMATSLEHLRGQLSEAE
VLRRAQQEREEVERQTMVRREALAQNFVARMKELASSFAGSSGEVAHAARDLSASADQTAQQAQAVAAAAEQAATNVQTV
AASSEELAASVREITAQVSHSATVADLAFREADASNQRISELARAAADIGEVINLIKSIADQTNLLALNATIEAARAGDA
GKGFAVVASEVKELASQTAKATSDISQKVEEIQSATNGTVASMAEIIRVVTNIKEISSAISGSVAQQGEATGEIAQNCQQ
ASTGTQEVTDNITGVGRAAQATGAASNQLLSLSQGLSAQATDLRSVVETFVRDLNAA
>Mature_616_residues
TNDGFYLHLSWALTVDSLLCMRAPSWRYDGWLARVPGKSDGQRSQQNTGDAMSYANLPMTWKVVVLLALLGVISLGGALY
STSTMSSIDSAYGELADGPQTAINKIARSARSAATVSTDIMRAIISTSDDDNVKAAAALKASMKRFGELMDEGADAVPNK
RAEITQLRDRLTTVVANECGEVVRIATTETSLDSIARAGALMSARCEPAINAVIAATVEFNGKLTAESNAIRATLQAQTR
HSALVTLLGIAGATLAMIAVAILLVRSGIVAPIRTMMGAMADMGQGKLGTPVAGTTRKDEIGAMATSLEHLRGQLSEAEV
LRRAQQEREEVERQTMVRREALAQNFVARMKELASSFAGSSGEVAHAARDLSASADQTAQQAQAVAAAAEQAATNVQTVA
ASSEELAASVREITAQVSHSATVADLAFREADASNQRISELARAAADIGEVINLIKSIADQTNLLALNATIEAARAGDAG
KGFAVVASEVKELASQTAKATSDISQKVEEIQSATNGTVASMAEIIRVVTNIKEISSAISGSVAQQGEATGEIAQNCQQA
STGTQEVTDNITGVGRAAQATGAASNQLLSLSQGLSAQATDLRSVVETFVRDLNAA

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=342, Percent_Identity=27.7777777777778, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1788194, Length=380, Percent_Identity=31.3157894736842, Blast_Score=102, Evalue=9e-23,
Organism=Escherichia coli, GI1789453, Length=191, Percent_Identity=34.5549738219895, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=25.5892255892256, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1787690, Length=234, Percent_Identity=29.9145299145299, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 64327; Mature: 64196

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDGFYLHLSWALTVDSLLCMRAPSWRYDGWLARVPGKSDGQRSQQNTGDAMSYANLPM
CCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCH
TWKVVVLLALLGVISLGGALYSTSTMSSIDSAYGELADGPQTAINKIARSARSAATVSTD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IMRAIISTSDDDNVKAAAALKASMKRFGELMDEGADAVPNKRAEITQLRDRLTTVVANEC
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GEVVRIATTETSLDSIARAGALMSARCEPAINAVIAATVEFNGKLTAESNAIRATLQAQT
CCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCEEECCCHHHHHHHHHHH
RHSALVTLLGIAGATLAMIAVAILLVRSGIVAPIRTMMGAMADMGQGKLGTPVAGTTRKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
EIGAMATSLEHLRGQLSEAEVLRRAQQEREEVERQTMVRREALAQNFVARMKELASSFAG
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSGEVAHAARDLSASADQTAQQAQAVAAAAEQAATNVQTVAASSEELAASVREITAQVSH
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
SATVADLAFREADASNQRISELARAAADIGEVINLIKSIADQTNLLALNATIEAARAGDA
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCC
GKGFAVVASEVKELASQTAKATSDISQKVEEIQSATNGTVASMAEIIRVVTNIKEISSAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SGSVAQQGEATGEIAQNCQQASTGTQEVTDNITGVGRAAQATGAASNQLLSLSQGLSAQA
HCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCHHH
TDLRSVVETFVRDLNAA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNDGFYLHLSWALTVDSLLCMRAPSWRYDGWLARVPGKSDGQRSQQNTGDAMSYANLPM
CCCCEEEEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCH
TWKVVVLLALLGVISLGGALYSTSTMSSIDSAYGELADGPQTAINKIARSARSAATVSTD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
IMRAIISTSDDDNVKAAAALKASMKRFGELMDEGADAVPNKRAEITQLRDRLTTVVANEC
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GEVVRIATTETSLDSIARAGALMSARCEPAINAVIAATVEFNGKLTAESNAIRATLQAQT
CCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCEEECCCHHHHHHHHHHH
RHSALVTLLGIAGATLAMIAVAILLVRSGIVAPIRTMMGAMADMGQGKLGTPVAGTTRKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
EIGAMATSLEHLRGQLSEAEVLRRAQQEREEVERQTMVRREALAQNFVARMKELASSFAG
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSGEVAHAARDLSASADQTAQQAQAVAAAAEQAATNVQTVAASSEELAASVREITAQVSH
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
SATVADLAFREADASNQRISELARAAADIGEVINLIKSIADQTNLLALNATIEAARAGDA
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCC
GKGFAVVASEVKELASQTAKATSDISQKVEEIQSATNGTVASMAEIIRVVTNIKEISSAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
SGSVAQQGEATGEIAQNCQQASTGTQEVTDNITGVGRAAQATGAASNQLLSLSQGLSAQA
HCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCHHH
TDLRSVVETFVRDLNAA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]