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The map label for this gene is secY [H]

Identifier: 158424158

GI number: 158424158

Start: 2870118

End: 2871452

Strand: Reverse

Name: secY [H]

Synonym: AZC_2534

Alternate gene names: 158424158

Gene position: 2871452-2870118 (Counterclockwise)

Preceding gene: 158424159

Following gene: 158424157

Centisome position: 53.47

GC content: 62.7

Gene sequence:

>1335_bases
ATGGTCTCGGCGGCCGAACAACTCGCGGCAAATCTGAATTTCGGTTCCCTCGGCAAGGCCGAGGAGCTGAAGAAGCGCAT
CTGGTTCACCCTCGGCGCGCTCATCGTCTTCCGGCTCGGGACCTATATCCCGCTTCCCGGCATCAACCCCGATGCGCTGC
AGGACGTGTTCCGCGGCGCCCAGCAGGGGATCATCGGCCTCTTCAACATGTTCTCGGGCGGCGCCGTGGAGCGCATGGCT
ATCTTCGCCCTGAACATCATGCCGTACATCTCCGCCTCCATCATCGTGCAGCTGCTGACGACCGTCTCCCCGACGCTCGA
GGCGCTGAAGAAGGAAGGCGAGGCGGGCCGCAAGAAGATCAACCAGTACACCCGCTATCTGACCGTCGTTCTGGCGGTGT
TCCAGGCCTATGGCATCGCCGTCGGCCTTGAGCGCTCCACCGGCGTCGTCATGGATCCGGGCTGGTTCTTCCGCATCTCC
ACGGTGATCACGCTGACCGGCGGCACCATGTTCATGATGTGGCTGGGCGAGCAGATCACTTCGCGCGGCATCGGCAACGG
CACCTCGCTCATCATCTTCGGCGGCATCGTCGCCGAACTGCCGGGCGCCTTCGTCCGCACGCTGGAACTGGGCCGTCAGG
GCGCCATCTCCACGCCGATCATTCTCGGCGTGCTTGTGATGGTGGTCTGCCTCATCGCCTTCATCGTGTTCATGGAGCGC
GCCCAGCGCCGTCTCCTGATCCAGTATCCCAAGCGTCAGGTCGGCAACCGGCTCTATGAGGGCCAGTCCTCGCATCTGCC
GCTGAAGCTGAACACGTCGGGCGTCATTCCGCCGATCTTCGCCTCTTCGCTGCTGCTGATCCCCACCACGATCGCCAGCT
TCCTGCAGGGCGCGGGTCCCGAGTGGCTGAATCAGGTCACGGCCCTGCTGGGCCACGGCCGTCCGCTGTACATGCTGCTG
TATGTGCTGCTGATCGTGTTCTTCTGCTTCTTCTACACCGCCATCGTGTTCAACCCGGTGGAGACGGCCGACAATCTGAA
GAAGCACGGCGGCTTCATTCCCGGCATCCGCCCCGGCGAGCGCACCGCGGAATATATCGACTATGTGCTGACCCGGATCA
CGGTGGTGGGCGCAGCCTACATCGCGGCGGTCTGTCTCTTCCCCGAAGTGCTGATTTCCTACGCCGCCGTGCCGTTCTAT
TTTGGCGGAACGTCGCTGCTGATCGTGGTGAGCGTGACCATGGATACGGTCTCGCAGATCCAGGGACATCTGCTGGCGCA
TCAATATGAGGGCTTGGTCAAGAAGTCCAAGCTGCGCGGGGGGAAACGGAAATGA

Upstream 100 bases:

>100_bases
CGCTTTCCGTGCGGCCGATGCTCCGGGGGTCTTTCGCGGCTCACACGCGCCTCTCATCTATAGCCCGCCTCCCGGTGCGG
CGGCGGAAGCGGAGCAAGGC

Downstream 100 bases:

>100_bases
GGTTGGTACTGCTTGGTCCTCCCGGTGCCGGCAAGGGCACGCAGGCGCTGCGTCTCGTCCAGCGTCACGGGATCGTCCAG
CTCTCCACCGGCGACATGCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MVSAAEQLAANLNFGSLGKAEELKKRIWFTLGALIVFRLGTYIPLPGINPDALQDVFRGAQQGIIGLFNMFSGGAVERMA
IFALNIMPYISASIIVQLLTTVSPTLEALKKEGEAGRKKINQYTRYLTVVLAVFQAYGIAVGLERSTGVVMDPGWFFRIS
TVITLTGGTMFMMWLGEQITSRGIGNGTSLIIFGGIVAELPGAFVRTLELGRQGAISTPIILGVLVMVVCLIAFIVFMER
AQRRLLIQYPKRQVGNRLYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGAGPEWLNQVTALLGHGRPLYMLL
YVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAAYIAAVCLFPEVLISYAAVPFY
FGGTSLLIVVSVTMDTVSQIQGHLLAHQYEGLVKKSKLRGGKRK

Sequences:

>Translated_444_residues
MVSAAEQLAANLNFGSLGKAEELKKRIWFTLGALIVFRLGTYIPLPGINPDALQDVFRGAQQGIIGLFNMFSGGAVERMA
IFALNIMPYISASIIVQLLTTVSPTLEALKKEGEAGRKKINQYTRYLTVVLAVFQAYGIAVGLERSTGVVMDPGWFFRIS
TVITLTGGTMFMMWLGEQITSRGIGNGTSLIIFGGIVAELPGAFVRTLELGRQGAISTPIILGVLVMVVCLIAFIVFMER
AQRRLLIQYPKRQVGNRLYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGAGPEWLNQVTALLGHGRPLYMLL
YVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAAYIAAVCLFPEVLISYAAVPFY
FGGTSLLIVVSVTMDTVSQIQGHLLAHQYEGLVKKSKLRGGKRK
>Mature_444_residues
MVSAAEQLAANLNFGSLGKAEELKKRIWFTLGALIVFRLGTYIPLPGINPDALQDVFRGAQQGIIGLFNMFSGGAVERMA
IFALNIMPYISASIIVQLLTTVSPTLEALKKEGEAGRKKINQYTRYLTVVLAVFQAYGIAVGLERSTGVVMDPGWFFRIS
TVITLTGGTMFMMWLGEQITSRGIGNGTSLIIFGGIVAELPGAFVRTLELGRQGAISTPIILGVLVMVVCLIAFIVFMER
AQRRLLIQYPKRQVGNRLYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGAGPEWLNQVTALLGHGRPLYMLL
YVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGERTAEYIDYVLTRITVVGAAYIAAVCLFPEVLISYAAVPFY
FGGTSLLIVVSVTMDTVSQIQGHLLAHQYEGLVKKSKLRGGKRK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=437, Percent_Identity=57.6659038901602, Blast_Score=457, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48466; Mature: 48466

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAAEQLAANLNFGSLGKAEELKKRIWFTLGALIVFRLGTYIPLPGINPDALQDVFRGA
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
QQGIIGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTTVSPTLEALKKEGEAGRKKI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYLTVVLAVFQAYGIAVGLERSTGVVMDPGWFFRISTVITLTGGTMFMMWLGEQIT
HHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHEEEEEHEEECCCHHHHHHHHHHHH
SRGIGNGTSLIIFGGIVAELPGAFVRTLELGRQGAISTPIILGVLVMVVCLIAFIVFMER
HCCCCCCCEEEEECHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRLYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGAGP
HHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
EWLNQVTALLGHGRPLYMLLYVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCH
RTAEYIDYVLTRITVVGAAYIAAVCLFPEVLISYAAVPFYFGGTSLLIVVSVTMDTVSQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEEHHHHHHHHH
QGHLLAHQYEGLVKKSKLRGGKRK
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVSAAEQLAANLNFGSLGKAEELKKRIWFTLGALIVFRLGTYIPLPGINPDALQDVFRGA
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
QQGIIGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTTVSPTLEALKKEGEAGRKKI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYLTVVLAVFQAYGIAVGLERSTGVVMDPGWFFRISTVITLTGGTMFMMWLGEQIT
HHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHEEEEEHEEECCCHHHHHHHHHHHH
SRGIGNGTSLIIFGGIVAELPGAFVRTLELGRQGAISTPIILGVLVMVVCLIAFIVFMER
HCCCCCCCEEEEECHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRLYEGQSSHLPLKLNTSGVIPPIFASSLLLIPTTIASFLQGAGP
HHHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
EWLNQVTALLGHGRPLYMLLYVLLIVFFCFFYTAIVFNPVETADNLKKHGGFIPGIRPGE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCH
RTAEYIDYVLTRITVVGAAYIAAVCLFPEVLISYAAVPFYFGGTSLLIVVSVTMDTVSQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEEHHHHHHHHH
QGHLLAHQYEGLVKKSKLRGGKRK
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA