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The map label for this gene is dctM [C]

Identifier: 158424146

GI number: 158424146

Start: 2858997

End: 2860937

Strand: Reverse

Name: dctM [C]

Synonym: AZC_2522

Alternate gene names: 158424146

Gene position: 2860937-2858997 (Counterclockwise)

Preceding gene: 158424147

Following gene: 158424145

Centisome position: 53.28

GC content: 66.05

Gene sequence:

>1941_bases
ATGATCCAGAACCGCGTCTTCAAGACGGGCCTCCTCTGTGCCCTCGCCGTGGCGCTCAGCACCCTCGGTCCGGAGATGGC
CTTCGCCGCCGATGGCGGCCTGCGCGCCTTCGTCACCCACAACATGGCGCCGATCATGTTCGGCGCCCTCGTGATCTTCC
TGCTGCTGGGTTATCCGGTGGCCTTCGCGCTGGCCGCCAACGGCCTCGTGTTCGGTGTCATCGGCATCGAACTCGGCCTG
TTCCGGCCGGACTTCCTTCAGGCGCTGCCCGAGCGCGTCTATGGCACCATGAACAATGAAGTGCTCCTCGCGGTGCCCTT
CTTCACCTTCATGGGCCTCATCCTCGAGCGCTCCGGCATGGCCGAGGATCTGCTCGACACCATCGGACAGGTATTCGGCT
CCATCCGCGGCGGCCTTGCCTATGCGGTGATCTTCGTGGGCGCGCTGCTCGCCGCCACCACGGGCGTCGTCGCGGCCTCG
GTCATCTCCATGGGCCTCATCTCGCTGCCCATCATGCTGCGCTACGGCTATGACCGGCGCGTGGCTTCGGGCGTGATCGC
GGCCTCGGGCACGCTGGCCCAGATCATCCCGCCCTCCCTCGTGCTCATCGTCATGGCCGACCAGCTCAACCGGTCGGTGG
GTGACATGTACGAGGGCGCCTTCGTGCCCGGCCTGTTGTTGGCCGGCCTCTACGCGTTCTACATCTTCCTCGTCTCGGCC
ATCTTCCCGAGCGTGGCTCCCGGCCTGCCGCTGGAAGCCCAGACCCTGCGCGACAAGAATCAGAAGCGCGGCCCCTCGCG
GCTGCTCGGCGCCATCTTCGCCGCCGGCTTTGCGGTGCTGATCGCCACCGGGTCCTTGCCGGGTCTCACGGCCGGCAGCC
TGCCGGGCGCGGCCAATCTGGCAGTCTGGGGCGTCGGTGCCTTCGTCCTGTTCTATTTCATCATGAGCGGCACCGCCCGC
CTGCTCACCCCCTCGCTGTTCATCGCCTTGTCCATCGCCATCGGCATCTCGATCGCGGTGATGGAGCGCTCCGGCATGCG
GGTCGGCTCGGACTATGTGGTCCTTGCCATGTCCATGACGGTGGGCCTCGCCTTCGTGGTGGCGGTCATCAACCGCGTGT
TCCGGCTGGGCCTGCTCTCGAAGCTGGCCGAGCAGGTCATCTTCGTGATGGTGCCCCCGCTGGCCCTGATCTTCCTTGTG
CTCGGCACCATCTTCATCGGCGTCGCAACGCCGACCGAGGGCGGCGCCATGGGTTCGGTGGGCGCGCTTCTGCTCGCCGC
CGGTCGCGGGCGCCTGAAGTTCGACCTGATGCGGCAGGCGACCTACTCGACGGCCAAGCTCTCGGCCTTCGTGCTGTTCA
TCCTGCTCGGCTCGCGCGTGTTCTCGCTGACCTTCTATGGCGTGGACGGCCACCGCTGGGTGGAGGAACTGCTCGTCTCG
CTGCCCGGCGGCCAGACCGGCTTCCTCATCGTGGTGAACATCCTCGTGTTCCTGCTGGCCTTCTTCCTCGATTATTTCGA
GCTGGCCTTCATCATCATCCCGCTGCTCGGACCGGCCGCCGACAAGCTCGGCATCGACCTGATCTGGTTCGGCGTGATGC
TGGCGGTGAACATGCAGACCTCCTTCATGCATCCGCCCTTCGGCTTTGCGCTGTTCTTCCTGCGGTCGGTCGCACCCAAG
GTGCCCTATCTCGACCGCGTGACGGGCAAGCGCATGGAGCCGGTGACCACGGGCCAGATCTACTGGGGTGCGGTGCCGTT
CGTCGGCATCCAGCTCATCATGGTGGCGCTGGTCGTGCTCTTCCCCGGCATGGTGACGCACTACAAGAGCAGCTCCGTGC
AACTGGATCAGGGGGCGGTGCAGAAGCAGTTCGACAACCTCACTCCGGATCTCGACTCCGCGCCGCCTCCGCCGGCACTG
GATTTCGGCGCTCCCAAATAG

Upstream 100 bases:

>100_bases
CCACCTTGCCTCCGCCGAGGCGGAAGCCCAGCGCCTGCTCGCCGATGTCGAGCCCGTCGCCATCGTCGCCGACACCAAGA
CGCCCTGAGGAAACGCGATC

Downstream 100 bases:

>100_bases
GCGCCCGACGGTCCACGACAAAGCCGCCCGCTGCGCAAGCGACGGGCGGCTTTGCATTTTCGGCGGTCGCCTGCGCGCCT
CGCCTCTGCTAGACAGGGCG

Product: TRAP dicarboxylate transporter DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MIQNRVFKTGLLCALAVALSTLGPEMAFAADGGLRAFVTHNMAPIMFGALVIFLLLGYPVAFALAANGLVFGVIGIELGL
FRPDFLQALPERVYGTMNNEVLLAVPFFTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAAS
VISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLAGLYAFYIFLVSA
IFPSVAPGLPLEAQTLRDKNQKRGPSRLLGAIFAAGFAVLIATGSLPGLTAGSLPGAANLAVWGVGAFVLFYFIMSGTAR
LLTPSLFIALSIAIGISIAVMERSGMRVGSDYVVLAMSMTVGLAFVVAVINRVFRLGLLSKLAEQVIFVMVPPLALIFLV
LGTIFIGVATPTEGGAMGSVGALLLAAGRGRLKFDLMRQATYSTAKLSAFVLFILLGSRVFSLTFYGVDGHRWVEELLVS
LPGGQTGFLIVVNILVFLLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVNMQTSFMHPPFGFALFFLRSVAPK
VPYLDRVTGKRMEPVTTGQIYWGAVPFVGIQLIMVALVVLFPGMVTHYKSSSVQLDQGAVQKQFDNLTPDLDSAPPPPAL
DFGAPK

Sequences:

>Translated_646_residues
MIQNRVFKTGLLCALAVALSTLGPEMAFAADGGLRAFVTHNMAPIMFGALVIFLLLGYPVAFALAANGLVFGVIGIELGL
FRPDFLQALPERVYGTMNNEVLLAVPFFTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAAS
VISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLAGLYAFYIFLVSA
IFPSVAPGLPLEAQTLRDKNQKRGPSRLLGAIFAAGFAVLIATGSLPGLTAGSLPGAANLAVWGVGAFVLFYFIMSGTAR
LLTPSLFIALSIAIGISIAVMERSGMRVGSDYVVLAMSMTVGLAFVVAVINRVFRLGLLSKLAEQVIFVMVPPLALIFLV
LGTIFIGVATPTEGGAMGSVGALLLAAGRGRLKFDLMRQATYSTAKLSAFVLFILLGSRVFSLTFYGVDGHRWVEELLVS
LPGGQTGFLIVVNILVFLLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVNMQTSFMHPPFGFALFFLRSVAPK
VPYLDRVTGKRMEPVTTGQIYWGAVPFVGIQLIMVALVVLFPGMVTHYKSSSVQLDQGAVQKQFDNLTPDLDSAPPPPAL
DFGAPK
>Mature_646_residues
MIQNRVFKTGLLCALAVALSTLGPEMAFAADGGLRAFVTHNMAPIMFGALVIFLLLGYPVAFALAANGLVFGVIGIELGL
FRPDFLQALPERVYGTMNNEVLLAVPFFTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAAS
VISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLAGLYAFYIFLVSA
IFPSVAPGLPLEAQTLRDKNQKRGPSRLLGAIFAAGFAVLIATGSLPGLTAGSLPGAANLAVWGVGAFVLFYFIMSGTAR
LLTPSLFIALSIAIGISIAVMERSGMRVGSDYVVLAMSMTVGLAFVVAVINRVFRLGLLSKLAEQVIFVMVPPLALIFLV
LGTIFIGVATPTEGGAMGSVGALLLAAGRGRLKFDLMRQATYSTAKLSAFVLFILLGSRVFSLTFYGVDGHRWVEELLVS
LPGGQTGFLIVVNILVFLLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVNMQTSFMHPPFGFALFFLRSVAPK
VPYLDRVTGKRMEPVTTGQIYWGAVPFVGIQLIMVALVVLFPGMVTHYKSSSVQLDQGAVQKQFDNLTPDLDSAPPPPAL
DFGAPK

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 68624; Mature: 68624

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQNRVFKTGLLCALAVALSTLGPEMAFAADGGLRAFVTHNMAPIMFGALVIFLLLGYPV
CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEHHHCCCHHHHHHHHHHHHHHHHHH
AFALAANGLVFGVIGIELGLFRPDFLQALPERVYGTMNNEVLLAVPFFTFMGLILERSGM
HHHHHHCCCEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCC
AEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLAGLYAFYIFLVSA
HHHCHHHCCCCHHHHCCCHHEEHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IFPSVAPGLPLEAQTLRDKNQKRGPSRLLGAIFAAGFAVLIATGSLPGLTAGSLPGAANL
HHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
AVWGVGAFVLFYFIMSGTARLLTPSLFIALSIAIGISIAVMERSGMRVGSDYVVLAMSMT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCHHHHHHHHH
VGLAFVVAVINRVFRLGLLSKLAEQVIFVMVPPLALIFLVLGTIFIGVATPTEGGAMGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
GALLLAAGRGRLKFDLMRQATYSTAKLSAFVLFILLGSRVFSLTFYGVDGHRWVEELLVS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHH
LPGGQTGFLIVVNILVFLLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVNMQT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SFMHPPFGFALFFLRSVAPKVPYLDRVTGKRMEPVTTGQIYWGAVPFVGIQLIMVALVVL
HCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
FPGMVTHYKSSSVQLDQGAVQKQFDNLTPDLDSAPPPPALDFGAPK
HCHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIQNRVFKTGLLCALAVALSTLGPEMAFAADGGLRAFVTHNMAPIMFGALVIFLLLGYPV
CCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEHHHCCCHHHHHHHHHHHHHHHHHH
AFALAANGLVFGVIGIELGLFRPDFLQALPERVYGTMNNEVLLAVPFFTFMGLILERSGM
HHHHHHCCCEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCC
AEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLAGLYAFYIFLVSA
HHHCHHHCCCCHHHHCCCHHEEHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IFPSVAPGLPLEAQTLRDKNQKRGPSRLLGAIFAAGFAVLIATGSLPGLTAGSLPGAANL
HHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
AVWGVGAFVLFYFIMSGTARLLTPSLFIALSIAIGISIAVMERSGMRVGSDYVVLAMSMT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCHHHHHHHHH
VGLAFVVAVINRVFRLGLLSKLAEQVIFVMVPPLALIFLVLGTIFIGVATPTEGGAMGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
GALLLAAGRGRLKFDLMRQATYSTAKLSAFVLFILLGSRVFSLTFYGVDGHRWVEELLVS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHH
LPGGQTGFLIVVNILVFLLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVNMQT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SFMHPPFGFALFFLRSVAPKVPYLDRVTGKRMEPVTTGQIYWGAVPFVGIQLIMVALVVL
HCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
FPGMVTHYKSSSVQLDQGAVQKQFDNLTPDLDSAPPPPALDFGAPK
HCHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]