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The map label for this gene is mmgC [H]

Identifier: 158424133

GI number: 158424133

Start: 2842792

End: 2843964

Strand: Reverse

Name: mmgC [H]

Synonym: AZC_2509

Alternate gene names: 158424133

Gene position: 2843964-2842792 (Counterclockwise)

Preceding gene: 158424134

Following gene: 158424132

Centisome position: 52.96

GC content: 64.62

Gene sequence:

>1173_bases
ATGAGCGGGACCATCGAGGCCATCGACGCCAATTTCTCCGACATCCGCGAAGCGGTCCGCAAACTGTGCGCGGACTTCCC
CGGCGAATACTGGCGCAAGCTCGATCGGGAGAGCGCCTATCCCACCGCCTTCGTCGAGGCGCTGACCCATTCAGGCTTTC
TCGCCGCCCTCATCCCTGAAAGCTATGGCGGCGCCGGCCTGCCGCTCTCGGCGGCTGCGGCGATCCTGGAGGAAGTGCAG
CGGGCCGGATGCAATGGCGGCGCCTGCCATGCCCAGATGTACATCATGGGCGCCCTGCTGCGGCATGGGACCGGGGCGCA
GAAGGAGACCTATCTGCCGAAGATCGCCTCTGGCGAACTGCGGCTTCAGGCCTTCGGCGTCACCGAGCCCACCTCCGGGA
CCGACACCACGGCGCTCAAGACCTTCGCCGAGAAGCGGGGCGACTATTATGTGGTGAACGGCCAGAAGGTCTGGACCTCT
CGCGCCGAGCATTCCGATCTCATGCTGCTGCTCGCCCGCACCACGCCGCGCGATCAGGTGCAGAAGCGCACGGATGGTCT
CTCGGTCTTCATCGTGGACATGCGGGAGGCCAAGGGCAACGGCCTCACCATCCGCCCCATCAGGGCGATGATGAACCACT
CCACCACCGAGGTCTTCTTCGACAATATGAAGGTTCCGGCGGAGAACCTCGTGGGCGAGGAGGGCAAGGGCTTCCGCTAC
ATCCTCTCCGGCATGAATGCGGAGCGCATCCTCATCGCGGCCGAATGCGTGGGCGATGCCAAATGGTTCATCGACAAGGC
CACCGCTTACGCCAAGGAGCGCGTGGTTTTCGGCCGGCCCATCGGCCAGAATCAGGGCGTCCAGTTCCCCATCGCAAAAG
CCTATGCGCAGATGCGTGCCGCCGAGCTGATGGTGCATCGGGCGGCGTCCCTTTTCGAGGCGGGGCAGGACTGCGGGCAG
GAAGCCAACATGGCCAAGATGCTGGCGGCCGATGCCTCATGGGCCGCTGCGGAAGCCTGCGTGCAGACCCATGGCGGCTT
CGGTTTCGCCGAGGAATATGACGTGGAGCGCAAGTTCCGCGAGACGCGCCTCTATCAGGTGGCGCCCATCTCCACCAATC
TCATCCTCTCCTATCTCGCCGAGCATGTGCTCGGCCTGCCGCGCTCCTATTGA

Upstream 100 bases:

>100_bases
GCGGCCATCACCTCTTCTTCTGGCGGTGATCAGATTTAGCGTTTTCCCCTATGGGGTTTCCGCTTGCTAGGAAGGGAGCA
ACACCTTCCTGGGAGCGGTC

Downstream 100 bases:

>100_bases
GGCCACCATGGCGACGTTGGACATCGACCATCTGCGCAGTTGGATCGGCCGCACCGAGACGGTGCGCGACCTGCTCACCG
CACGCGCCTTGCGGGAGTTT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSGTIEAIDANFSDIREAVRKLCADFPGEYWRKLDRESAYPTAFVEALTHSGFLAALIPESYGGAGLPLSAAAAILEEVQ
RAGCNGGACHAQMYIMGALLRHGTGAQKETYLPKIASGELRLQAFGVTEPTSGTDTTALKTFAEKRGDYYVVNGQKVWTS
RAEHSDLMLLLARTTPRDQVQKRTDGLSVFIVDMREAKGNGLTIRPIRAMMNHSTTEVFFDNMKVPAENLVGEEGKGFRY
ILSGMNAERILIAAECVGDAKWFIDKATAYAKERVVFGRPIGQNQGVQFPIAKAYAQMRAAELMVHRAASLFEAGQDCGQ
EANMAKMLAADASWAAAEACVQTHGGFGFAEEYDVERKFRETRLYQVAPISTNLILSYLAEHVLGLPRSY

Sequences:

>Translated_390_residues
MSGTIEAIDANFSDIREAVRKLCADFPGEYWRKLDRESAYPTAFVEALTHSGFLAALIPESYGGAGLPLSAAAAILEEVQ
RAGCNGGACHAQMYIMGALLRHGTGAQKETYLPKIASGELRLQAFGVTEPTSGTDTTALKTFAEKRGDYYVVNGQKVWTS
RAEHSDLMLLLARTTPRDQVQKRTDGLSVFIVDMREAKGNGLTIRPIRAMMNHSTTEVFFDNMKVPAENLVGEEGKGFRY
ILSGMNAERILIAAECVGDAKWFIDKATAYAKERVVFGRPIGQNQGVQFPIAKAYAQMRAAELMVHRAASLFEAGQDCGQ
EANMAKMLAADASWAAAEACVQTHGGFGFAEEYDVERKFRETRLYQVAPISTNLILSYLAEHVLGLPRSY
>Mature_389_residues
SGTIEAIDANFSDIREAVRKLCADFPGEYWRKLDRESAYPTAFVEALTHSGFLAALIPESYGGAGLPLSAAAAILEEVQR
AGCNGGACHAQMYIMGALLRHGTGAQKETYLPKIASGELRLQAFGVTEPTSGTDTTALKTFAEKRGDYYVVNGQKVWTSR
AEHSDLMLLLARTTPRDQVQKRTDGLSVFIVDMREAKGNGLTIRPIRAMMNHSTTEVFFDNMKVPAENLVGEEGKGFRYI
LSGMNAERILIAAECVGDAKWFIDKATAYAKERVVFGRPIGQNQGVQFPIAKAYAQMRAAELMVHRAASLFEAGQDCGQE
ANMAKMLAADASWAAAEACVQTHGGFGFAEEYDVERKFRETRLYQVAPISTNLILSYLAEHVLGLPRSY

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=378, Percent_Identity=32.2751322751323, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI4557233, Length=367, Percent_Identity=30.7901907356948, Blast_Score=175, Evalue=7e-44,
Organism=Homo sapiens, GI187960098, Length=342, Percent_Identity=33.3333333333333, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI4557231, Length=342, Percent_Identity=33.3333333333333, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI226958412, Length=372, Percent_Identity=29.0322580645161, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI226958414, Length=329, Percent_Identity=30.0911854103343, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI76496475, Length=345, Percent_Identity=31.8840579710145, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI4557235, Length=345, Percent_Identity=31.8840579710145, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI21361497, Length=362, Percent_Identity=30.3867403314917, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI4501857, Length=371, Percent_Identity=29.9191374663073, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI7656849, Length=360, Percent_Identity=30, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI4503943, Length=355, Percent_Identity=25.6338028169014, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI7669494, Length=355, Percent_Identity=25.6338028169014, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI211971008, Length=282, Percent_Identity=26.5957446808511, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI48976061, Length=282, Percent_Identity=26.5957446808511, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI38505218, Length=295, Percent_Identity=25.0847457627119, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI87081958, Length=379, Percent_Identity=30.0791556728232, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1786223, Length=384, Percent_Identity=27.6041666666667, Blast_Score=138, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17506239, Length=376, Percent_Identity=30.0531914893617, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71985184, Length=356, Percent_Identity=31.7415730337079, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17508101, Length=379, Percent_Identity=30.8707124010554, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17534899, Length=349, Percent_Identity=34.6704871060172, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17570075, Length=386, Percent_Identity=30.8290155440415, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17569725, Length=381, Percent_Identity=30.4461942257218, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI71990804, Length=303, Percent_Identity=34.983498349835, Blast_Score=165, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17538396, Length=363, Percent_Identity=27.2727272727273, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI71985192, Length=290, Percent_Identity=32.7586206896552, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17505929, Length=341, Percent_Identity=27.5659824046921, Blast_Score=145, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17551932, Length=343, Percent_Identity=26.530612244898, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17533517, Length=355, Percent_Identity=27.887323943662, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI32563615, Length=251, Percent_Identity=31.0756972111554, Blast_Score=120, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI71982178, Length=277, Percent_Identity=28.8808664259928, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17534353, Length=329, Percent_Identity=25.8358662613982, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17531909, Length=246, Percent_Identity=28.4552845528455, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17562446, Length=302, Percent_Identity=24.5033112582781, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17531913, Length=170, Percent_Identity=25.8823529411765, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI86563383, Length=278, Percent_Identity=27.6978417266187, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI86563381, Length=278, Percent_Identity=27.6978417266187, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356377, Length=364, Percent_Identity=32.6923076923077, Blast_Score=195, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24666513, Length=377, Percent_Identity=32.6259946949602, Blast_Score=182, Evalue=3e-46,
Organism=Drosophila melanogaster, GI24660351, Length=373, Percent_Identity=31.0991957104558, Blast_Score=158, Evalue=7e-39,
Organism=Drosophila melanogaster, GI281363737, Length=404, Percent_Identity=28.2178217821782, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI21355753, Length=333, Percent_Identity=30.9309309309309, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646207, Length=388, Percent_Identity=28.0927835051546, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI19920834, Length=292, Percent_Identity=29.7945205479452, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42689; Mature: 42558

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTIEAIDANFSDIREAVRKLCADFPGEYWRKLDRESAYPTAFVEALTHSGFLAALIPE
CCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCC
SYGGAGLPLSAAAAILEEVQRAGCNGGACHAQMYIMGALLRHGTGAQKETYLPKIASGEL
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
RLQAFGVTEPTSGTDTTALKTFAEKRGDYYVVNGQKVWTSRAEHSDLMLLLARTTPRDQV
EEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEECCCCCCCCEEEEEECCCCHHHH
QKRTDGLSVFIVDMREAKGNGLTIRPIRAMMNHSTTEVFFDNMKVPAENLVGEEGKGFRY
HHHCCCCEEEEEEEECCCCCCEEEHHHHHHHCCCCHHEEECCCCCCHHHHCCCCCCCHHH
ILSGMNAERILIAAECVGDAKWFIDKATAYAKERVVFGRPIGQNQGVQFPIAKAYAQMRA
HCCCCCCCEEEEEEEHHCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHHHHHHH
AELMVHRAASLFEAGQDCGQEANMAKMLAADASWAAAEACVQTHGGFGFAEEYDVERKFR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
ETRLYQVAPISTNLILSYLAEHVLGLPRSY
HHHCEEEECCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SGTIEAIDANFSDIREAVRKLCADFPGEYWRKLDRESAYPTAFVEALTHSGFLAALIPE
CCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCC
SYGGAGLPLSAAAAILEEVQRAGCNGGACHAQMYIMGALLRHGTGAQKETYLPKIASGEL
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
RLQAFGVTEPTSGTDTTALKTFAEKRGDYYVVNGQKVWTSRAEHSDLMLLLARTTPRDQV
EEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCEEECCCCCCCCEEEEEECCCCHHHH
QKRTDGLSVFIVDMREAKGNGLTIRPIRAMMNHSTTEVFFDNMKVPAENLVGEEGKGFRY
HHHCCCCEEEEEEEECCCCCCEEEHHHHHHHCCCCHHEEECCCCCCHHHHCCCCCCCHHH
ILSGMNAERILIAAECVGDAKWFIDKATAYAKERVVFGRPIGQNQGVQFPIAKAYAQMRA
HCCCCCCCEEEEEEEHHCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCHHHHHHHHHHH
AELMVHRAASLFEAGQDCGQEANMAKMLAADASWAAAEACVQTHGGFGFAEEYDVERKFR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
ETRLYQVAPISTNLILSYLAEHVLGLPRSY
HHHCEEEECCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]