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The map label for this gene is ssuC [C]

Identifier: 158424127

GI number: 158424127

Start: 2837628

End: 2838497

Strand: Direct

Name: ssuC [C]

Synonym: AZC_2503

Alternate gene names: 158424127

Gene position: 2837628-2838497 (Clockwise)

Preceding gene: 158424126

Following gene: 158424128

Centisome position: 52.84

GC content: 66.9

Gene sequence:

>870_bases
TTGCGGAGCCGCGACATGACCACCCTCACCACCGGCGCGCGCGCCGGCCGCCGACCTTGGCGCCTGCCGATCCCGCGCGC
TGGCGCCCTCGTGCTGGCGCTGATCCTTCCTGTCGCGCTCGTCATCCTCTGGCAGCTCTCGGGCAAGGACGGCGCGCTAT
TTGGCGGCGCACTGCCGACACCCGACCGGGTCTGGAACGCGTGGGTCACCTGGGCCTTCGGACCCAAGGGCATGGGCCTC
AATCCCTATTCCGGCACGTGGCTGGAGAGCGTCACCTTCTCCACCATCCGCGTCGCCAAGGGTTTCTCGCTGGCCATTCT
GGTGGGCGTGCCGCTCGGCATCGCCATCGGCTGGTGGAAGCTGTTCGCCATGGTGGTGGACCCGACGATCCAGTGGCTGC
GGCCCGTGCCGATCACCGCCTGGCTGCCGATCTCCATCGCCATCTTCGGCATCAGCGATTTCGGCTCCATCTTCCTCATC
ACCATCGGCGCCTTCTATCCCATCGTCATCAACACCACCCACGGCACGCGGGATGTTGAAAAGAACTGGATCCGCGCCGC
GCTGATGATGGGCTCCTCCCCGCTCACCGTGATGCGGCGGGTGGTGCTGCCCGCCGCCCTGCCGTCCATCTTCACGGGCC
TGCGCATCGGCCTCGGCATCGCCTGGACGGCGGTGATCGTCTCCGAAATGGTCGCCGTGAAGTCCGGCCTCGGTTACGTG
CTGTGGGATGCCTATTACGTCGGCCGCATGGACATCGTGATCGCCGACATGGTCTCCATCGGCCTGCTGGGCTACCTCAG
CGACGTCCTCATCGTCCGCCTCGAGCACACGGTGCTGCGCTGGCGGCGCCTGCAATCCTTCAACGCGTGA

Upstream 100 bases:

>100_bases
AGGGACCTTCCGGAGCGCGGGCACCCCTCTCCCCTCTCCCCCGGGGTGCCCGCGCCGATATCATGGATGCCTCGATCCTG
ACGATGCGCGAGGCAAGACG

Downstream 100 bases:

>100_bases
GGCCACCATGGGCACCGTTTCCATGACCGGCGTGTCCAAGGTGTATGGCGGCGCCCACGGCGTCCGTGCCCTGGACAATG
TGGACGTGCATCTTGCCGAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRSRDMTTLTTGARAGRRPWRLPIPRAGALVLALILPVALVILWQLSGKDGALFGGALPTPDRVWNAWVTWAFGPKGMGL
NPYSGTWLESVTFSTIRVAKGFSLAILVGVPLGIAIGWWKLFAMVVDPTIQWLRPVPITAWLPISIAIFGISDFGSIFLI
TIGAFYPIVINTTHGTRDVEKNWIRAALMMGSSPLTVMRRVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVAVKSGLGYV
LWDAYYVGRMDIVIADMVSIGLLGYLSDVLIVRLEHTVLRWRRLQSFNA

Sequences:

>Translated_289_residues
MRSRDMTTLTTGARAGRRPWRLPIPRAGALVLALILPVALVILWQLSGKDGALFGGALPTPDRVWNAWVTWAFGPKGMGL
NPYSGTWLESVTFSTIRVAKGFSLAILVGVPLGIAIGWWKLFAMVVDPTIQWLRPVPITAWLPISIAIFGISDFGSIFLI
TIGAFYPIVINTTHGTRDVEKNWIRAALMMGSSPLTVMRRVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVAVKSGLGYV
LWDAYYVGRMDIVIADMVSIGLLGYLSDVLIVRLEHTVLRWRRLQSFNA
>Mature_289_residues
MRSRDMTTLTTGARAGRRPWRLPIPRAGALVLALILPVALVILWQLSGKDGALFGGALPTPDRVWNAWVTWAFGPKGMGL
NPYSGTWLESVTFSTIRVAKGFSLAILVGVPLGIAIGWWKLFAMVVDPTIQWLRPVPITAWLPISIAIFGISDFGSIFLI
TIGAFYPIVINTTHGTRDVEKNWIRAALMMGSSPLTVMRRVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVAVKSGLGYV
LWDAYYVGRMDIVIADMVSIGLLGYLSDVLIVRLEHTVLRWRRLQSFNA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=35.6275303643725, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1786564, Length=280, Percent_Identity=32.5, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1789033, Length=180, Percent_Identity=28.3333333333333, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31685; Mature: 31685

Theoretical pI: Translated: 11.23; Mature: 11.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRDMTTLTTGARAGRRPWRLPIPRAGALVLALILPVALVILWQLSGKDGALFGGALPT
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
PDRVWNAWVTWAFGPKGMGLNPYSGTWLESVTFSTIRVAKGFSLAILVGVPLGIAIGWWK
HHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
LFAMVVDPTIQWLRPVPITAWLPISIAIFGISDFGSIFLITIGAFYPIVINTTHGTRDVE
HHHHHHCCHHHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCCHHH
KNWIRAALMMGSSPLTVMRRVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVAVKSGLGYV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LWDAYYVGRMDIVIADMVSIGLLGYLSDVLIVRLEHTVLRWRRLQSFNA
EEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSRDMTTLTTGARAGRRPWRLPIPRAGALVLALILPVALVILWQLSGKDGALFGGALPT
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
PDRVWNAWVTWAFGPKGMGLNPYSGTWLESVTFSTIRVAKGFSLAILVGVPLGIAIGWWK
HHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
LFAMVVDPTIQWLRPVPITAWLPISIAIFGISDFGSIFLITIGAFYPIVINTTHGTRDVE
HHHHHHCCHHHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCCHHH
KNWIRAALMMGSSPLTVMRRVVLPAALPSIFTGLRIGLGIAWTAVIVSEMVAVKSGLGYV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LWDAYYVGRMDIVIADMVSIGLLGYLSDVLIVRLEHTVLRWRRLQSFNA
EEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]